RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 TMEM56Q96MV1 263 aa9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 MTCH1Q9NZJ7 389 aa9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 TMEM56-RWDD3S4R434 201 aa9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 ZNF318Q5VUA4 2279 aa9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 KIAA1324LA8MWY0 1029 aaPredicted RBP9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 ZIC3O60481 467 aa9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 HRASP01112 189 aa9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 NTF3P20783 257 aa9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 FGF12P61328 243 aa9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 ARL16Q0P5N6 197 aa9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 JOSD1Q15040 202 aaPredicted RBP9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 EXT1Q16394 746 aa9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 SPINK14Q6IE38 97 aa9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 WDR74Q6RFH5 385 aaPredicted RBP9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 TUSC5Q8IXB3 177 aa9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 ZIC4Q8N9L1 334 aa9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 AGBL5Q8NDL9 886 aa9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 CPEB3Q8NE35 698 aaKnown RBP9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 RAB24Q969Q5 203 aa9.73□□□□□ -0.85
PCDHGA11-203ENST00000622044 OR3A1P47881 315 aa9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 CDC34P49427 236 aaPredicted RBP9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 CYB561P49447 251 aa9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 CATR1Q13166 79 aa9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 HERPUD1Q15011 391 aa9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 TCF23Q7RTU1 214 aa9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 ZNF573Q86YE8 665 aa9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 APH1AQ96BI3 265 aa9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 A6NNC1 897 aa9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 CDIPTO14735 213 aa9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 RHBDL1O75783 438 aa9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 PMCHP20382 165 aa9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 CTSSP25774 331 aa9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 RPL23P62829 140 aaKnown RBP9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 NMSQ5H8A3 153 aa9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 LYSMD4Q5XG99 296 aa9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 SSX7Q7RTT5 188 aa9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 TXN2Q99757 166 aa9.72□□□□□ -0.85
PCDHGA11-203ENST00000622044 DUXBA0A1W2PPF3 345 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 C17orf112F2Z3M2 114 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 KBTBD11O94819 623 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 CXCL12P48061 93 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 NUFIP2Q7Z417 695 aaKnown RBP9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 FGFRL1Q8N441 504 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 ZNF525Q8N782 197 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 CMTM2Q8TAZ6 248 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 ZDHHC16Q969W1 377 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 APOBEC3DQ96AK3 386 aaPredicted RBP9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 NOL4LQ96MY1 436 aaPredicted RBP9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 SIGLEC12Q96PQ1 595 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 IMMP2LQ96T52 175 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 NDUFAF3Q9BU61 184 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 WDR61Q9GZS3 305 aaKnown RBP9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 GNG12Q9UBI6 72 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 ACTL6BO94805 426 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 CRYGSP22914 178 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 GNG3P63215 75 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 HIST3H3Q16695 136 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 SSMEM1Q8WWF3 244 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 DUSP23Q9BVJ7 150 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 LTBP2Q14767 1821 aa9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 CHD3Q12873 2000 aaKnown RBP9.71□□□□□ -0.85
PCDHGA11-203ENST00000622044 PIGBOS1A0A0B4J2F0 54 aa9.71□□□□□ -0.86
PCDHGA11-203ENST00000622044 LRP5LA4QPB2 252 aa9.71□□□□□ -0.86
PCDHGA11-203ENST00000622044 ZG16O60844 167 aa9.71□□□□□ -0.86
PCDHGA11-203ENST00000622044 FGF5P12034 268 aa9.71□□□□□ -0.86
PCDHGA11-203ENST00000622044 FOXG1P55316 489 aaPredicted RBP9.71□□□□□ -0.86
PCDHGA11-203ENST00000622044 TCL1AP56279 114 aa9.71□□□□□ -0.86
PCDHGA11-203ENST00000622044 SERF2P84101 59 aa9.71□□□□□ -0.86
PCDHGA11-203ENST00000622044 TFF3Q07654 80 aa9.71□□□□□ -0.86
PCDHGA11-203ENST00000622044 OR8G5Q8NG78 346 aa9.71□□□□□ -0.86
PCDHGA11-203ENST00000622044 CDH20Q9HBT6 801 aa9.71□□□□□ -0.86
PCDHGA11-203ENST00000622044 RNF212BA8MTL3 300 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 SRFP11831 508 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 OR5I1Q13606 314 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 PRSS8Q16651 343 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 SLC25A53Q5H9E4 307 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 PRAMEF5Q5TYX0 476 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 ABHD17BQ5VST6 288 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 PRAMEF6Q5VXH4 476 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 CRIP3Q6Q6R5 217 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 C20orf204Q6ZNR8 217 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 RPP25LQ8N5L8 163 aaKnown RBP9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 MRGPRDQ8TDS7 321 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 DTD1Q8TEA8 209 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 SSC4DQ8WTU2 575 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 PLEKHA3Q9HB20 300 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 ZNF391Q9UJN7 358 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 ABCA1O95477 2261 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 CTXND1A0A1B0GTU2 59 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 MGST1P10620 155 aaKnown RBP9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 HOXA6P31267 233 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 NUBP1P53384 320 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 GNB2P62879 340 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 CYP2G1PQ6ZSU1 146 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 VAMP8Q9BV40 100 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 B4GALT7Q9UBV7 327 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 OTX1P32242 354 aaPredicted RBP9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 UCP2P55851 309 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 SPCS3P61009 180 aa9.7□□□□□ -0.86
PCDHGA11-203ENST00000622044 UBE2NP61088 152 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 802.6 ms