RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 IGKV1-39P01597 117 aa14.68□□□□□ -0.06
FAM3A-222ENST00000621967 IGKV1D-39P04432 117 aa14.68□□□□□ -0.06
FAM3A-222ENST00000621967 SERPINE2P07093 398 aa14.68□□□□□ -0.06
FAM3A-222ENST00000621967 OR13C7P0DN81 318 aa14.68□□□□□ -0.06
FAM3A-222ENST00000621967 SPATA46Q5T0L3 261 aa14.68□□□□□ -0.06
FAM3A-222ENST00000621967 MRGPRGQ86SM5 289 aa14.68□□□□□ -0.06
FAM3A-222ENST00000621967 A0A1W2PR80 420 aa14.68□□□□□ -0.06
FAM3A-222ENST00000621967 SLC33A1O00400 549 aaPredicted RBP14.68□□□□□ -0.06
FAM3A-222ENST00000621967 SMPD2O60906 423 aa14.68□□□□□ -0.06
FAM3A-222ENST00000621967 DFFBO76075 338 aa14.68□□□□□ -0.06
FAM3A-222ENST00000621967 NXPH3O95157 252 aa14.68□□□□□ -0.06
FAM3A-222ENST00000621967 MAS1LP35410 378 aa14.68□□□□□ -0.06
FAM3A-222ENST00000621967 TAS2R30P59541 319 aa14.68□□□□□ -0.06
FAM3A-222ENST00000621967 RUNX1Q01196 453 aa14.68□□□□□ -0.06
FAM3A-222ENST00000621967 SOHLH1Q5JUK2 328 aa14.68□□□□□ -0.06
FAM3A-222ENST00000621967 MYPOPQ86VE0 399 aaPredicted RBP14.68□□□□□ -0.06
FAM3A-222ENST00000621967 SCCPDHQ8NBX0 429 aa14.68□□□□□ -0.06
FAM3A-222ENST00000621967 CD300LFQ8TDQ1 290 aa14.68□□□□□ -0.06
FAM3A-222ENST00000621967 A0A1W2PPH5 198 aa14.67□□□□□ -0.06
FAM3A-222ENST00000621967 OR2H2O95918 312 aa14.67□□□□□ -0.06
FAM3A-222ENST00000621967 DAOP14920 347 aa14.67□□□□□ -0.06
FAM3A-222ENST00000621967 RPL23AP62750 156 aaKnown RBP14.67□□□□□ -0.06
FAM3A-222ENST00000621967 TGFBR3Q03167 851 aa14.67□□□□□ -0.06
FAM3A-222ENST00000621967 Q6ZRM9 215 aa14.67□□□□□ -0.06
FAM3A-222ENST00000621967 STX12Q86Y82 276 aa14.67□□□□□ -0.06
FAM3A-222ENST00000621967 ZNF561Q8N587 486 aa14.67□□□□□ -0.06
FAM3A-222ENST00000621967 CA5BP1Q8WTZ4 195 aa14.67□□□□□ -0.06
FAM3A-222ENST00000621967 IL1F10Q8WWZ1 152 aa14.67□□□□□ -0.06
FAM3A-222ENST00000621967 ISOC2Q96AB3 205 aa14.67□□□□□ -0.06
FAM3A-222ENST00000621967 MALSU1Q96EH3 234 aa14.67□□□□□ -0.06
FAM3A-222ENST00000621967 C12orf57Q99622 126 aa14.67□□□□□ -0.06
FAM3A-222ENST00000621967 MBNL3Q9NUK0 354 aaKnown RBP14.67□□□□□ -0.06
FAM3A-222ENST00000621967 POLDIP2Q9Y2S7 368 aa14.67□□□□□ -0.06
FAM3A-222ENST00000621967 WSB1Q9Y6I7 421 aa14.67□□□□□ -0.06
FAM3A-222ENST00000621967 A6NLC8 198 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 FAM90A27PA6NNH2 459 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 A8MXE2 369 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 SRP19P09132 144 aaKnown RBP14.66□□□□□ -0.06
FAM3A-222ENST00000621967 PGA5P0DJD9 388 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 IGHV1-2P23083 117 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 ZNF146Q15072 292 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 P2RY6Q15077 328 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 AKR1C8PQ5T2L2 129 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 ZNF474Q6S9Z5 364 aaPredicted RBP14.66□□□□□ -0.06
FAM3A-222ENST00000621967 UNKLQ9H9P5 680 aaKnown RBP14.66□□□□□ -0.06
FAM3A-222ENST00000621967 WIPI2Q9Y4P8 454 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 MYO18BQ8IUG5 2567 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 C5orf52A6NGY3 159 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 SIRPB1O00241 398 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 LYZL6O75951 148 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 CELA3BP08861 270 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 RAB5AP20339 215 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 COX5AP20674 150 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 PPP1CBP62140 327 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 ZNF506Q5JVG8 444 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 CXorf67Q86X51 503 aaPredicted RBP14.66□□□□□ -0.06
FAM3A-222ENST00000621967 YPEL4Q96NS1 127 aa14.66□□□□□ -0.06
FAM3A-222ENST00000621967 ZG16O60844 167 aa14.65□□□□□ -0.06
FAM3A-222ENST00000621967 IGKV1-5P01602 117 aa14.65□□□□□ -0.06
FAM3A-222ENST00000621967 CD200P41217 278 aa14.65□□□□□ -0.06
FAM3A-222ENST00000621967 TLE4Q04727 773 aa14.65□□□□□ -0.06
FAM3A-222ENST00000621967 RBMXL1Q96E39 390 aaKnown RBP14.65□□□□□ -0.06
FAM3A-222ENST00000621967 OR2J1Q9GZK6 312 aa14.65□□□□□ -0.06
FAM3A-222ENST00000621967 JKAMPQ9P055 326 aa14.65□□□□□ -0.06
FAM3A-222ENST00000621967 TRAV1-1A0A0B4J248 108 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 TRAV39A0A0B4J263 110 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 UBE2CO00762 179 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 SCAF4O95104 1147 aaKnown RBP14.64□□□□□ -0.07
FAM3A-222ENST00000621967 HBE1P02100 147 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 HSPB1P04792 205 aaKnown RBP14.64□□□□□ -0.07
FAM3A-222ENST00000621967 MEOX2P50222 304 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 SNRPEP62304 92 aaKnown RBP14.64□□□□□ -0.07
FAM3A-222ENST00000621967 ICAM4Q14773 271 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 GABRA6Q16445 453 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 ZNF585BQ52M93 769 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 KRBOX4Q5JUW0 171 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 LIN7CQ9NUP9 197 aaKnown RBP14.64□□□□□ -0.07
FAM3A-222ENST00000621967 CACNG5Q9UF02 275 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 A0A1W2PPE2 198 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 IQCF6A8MYZ5 107 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 H3BP45 60 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 SYNGR2O43760 224 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 ARG1P05089 322 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 RAC2P15153 192 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 HOXC12P31275 282 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 RPS23P62266 143 aaKnown RBP14.64□□□□□ -0.07
FAM3A-222ENST00000621967 IZUMO4Q1ZYL8 232 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 CLDND2Q8NHS1 167 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 ELOVL5Q9NYP7 299 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 TRAPPC2LQ9UL33 140 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 USF3Q68DE3 2245 aa14.64□□□□□ -0.07
FAM3A-222ENST00000621967 CHD3Q12873 2000 aaKnown RBP14.63□□□□□ -0.07
FAM3A-222ENST00000621967 PCP4L1A6NKN8 68 aa14.63□□□□□ -0.07
FAM3A-222ENST00000621967 EIF3GO75821 320 aaKnown RBP eCLIP14.63□□□□□ -0.07
FAM3A-222ENST00000621967 ACAA1P09110 424 aaPredicted RBP14.63□□□□□ -0.07
FAM3A-222ENST00000621967 TMEM267Q0VDI3 215 aaPredicted RBP14.63□□□□□ -0.07
FAM3A-222ENST00000621967 C1orf162Q8NEQ5 155 aaPredicted RBP14.63□□□□□ -0.07
FAM3A-222ENST00000621967 RNASE11Q8TAA1 199 aaKnown RBP14.63□□□□□ -0.07
FAM3A-222ENST00000621967 CDH20Q9HBT6 801 aa14.63□□□□□ -0.07
FAM3A-222ENST00000621967 PUS1Q9Y606 427 aaKnown RBP eCLIP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms