RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 LYL1P12980 280 aa16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 ECI1P42126 302 aa16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 CEBPDP49716 269 aaPredicted RBP16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 UBE2KP61086 200 aa16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 ACTR3CQ9C0K3 210 aaPredicted RBP16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 TLN1Q9Y490 2541 aaKnown RBP16.4■□□□□ 0.22
LAPTM4B-204ENST00000619747 IGKV1-6A0A0C4DH72 117 aa16.39■□□□□ 0.21
LAPTM4B-204ENST00000619747 TAAR5O14804 337 aa16.39■□□□□ 0.21
LAPTM4B-204ENST00000619747 IFNA21P01568 189 aa16.39■□□□□ 0.21
LAPTM4B-204ENST00000619747 TK1P04183 234 aa16.39■□□□□ 0.21
LAPTM4B-204ENST00000619747 GNRHRP30968 328 aa16.39■□□□□ 0.21
LAPTM4B-204ENST00000619747 TMEM187Q14656 261 aa16.39■□□□□ 0.21
LAPTM4B-204ENST00000619747 WDR31Q8NA23 367 aa16.39■□□□□ 0.21
LAPTM4B-204ENST00000619747 DIRC2Q96SL1 478 aa16.39■□□□□ 0.21
LAPTM4B-204ENST00000619747 MSL2Q9HCI7 577 aa16.39■□□□□ 0.21
LAPTM4B-204ENST00000619747 HSD17B6O14756 317 aa16.39■□□□□ 0.21
LAPTM4B-204ENST00000619747 DEGS1O15121 323 aa16.39■□□□□ 0.21
LAPTM4B-204ENST00000619747 ATXN7O15265 892 aaPredicted RBP16.39■□□□□ 0.21
LAPTM4B-204ENST00000619747 PRH1P02810 166 aa16.39■□□□□ 0.21
LAPTM4B-204ENST00000619747 RPLP1P05386 114 aaKnown RBP16.39■□□□□ 0.21
LAPTM4B-204ENST00000619747 GUSBP1Q15486 140 aa16.39■□□□□ 0.21
LAPTM4B-204ENST00000619747 FBXW12Q6X9E4 464 aa16.39■□□□□ 0.21
LAPTM4B-204ENST00000619747 TCF21O43680 179 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 METTL15P1P0C7V9 234 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 PPP1CCP36873 323 aaKnown RBP16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 MPV17LQ2QL34 196 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 SEM1Q6ZVN7 128 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 RTL8AQ9BWD3 113 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 SLC33A1O00400 549 aaPredicted RBP16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 TNFSF13O75888 250 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 RPL29P47914 159 aaKnown RBP16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 DLK1P80370 383 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 IL24Q13007 206 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 IL15RAQ13261 267 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 BTNL3Q6UXE8 466 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 COMMD1Q8N668 190 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 NXPH2O95156 264 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 CECR9P0C854 216 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 OR3A1P47881 315 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 TMEM33P57088 247 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 TEX38Q6PEX7 206 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 INO80CQ6PI98 192 aaPredicted RBP16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 ZNF818PQ6ZRF7 136 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 GAPTQ8N292 157 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 STARD4Q96DR4 205 aa16.38■□□□□ 0.21
LAPTM4B-204ENST00000619747 IGF2RP11717 2491 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 JTBO76095 146 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 RPL12P30050 165 aaKnown RBP16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 HAGHQ16775 308 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 SLC35G3Q8N808 338 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 OR52M1Q8NGK5 317 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 OR13D1Q8NGV5 346 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 MRPL30Q8TCC3 161 aaKnown RBP16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 SYT3Q9BQG1 590 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 PBDC1Q9BVG4 233 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 CCL28Q9NRJ3 127 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 FAM90A10PA6NDY2 464 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 FAM90A18PA6NE21 464 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 FAM90A16PA6NEW6 464 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 FAM90A20PA6NIJ5 464 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 FAM90A8PA6NJQ4 464 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 FAM90A7PA6NKC0 464 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 FAM90A22PA8MWA6 464 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 FAM90A12PA8MX19 464 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 FAM90A5PA8MXJ8 464 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 FAM90A23PA8MXZ1 464 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 J3QT63 122 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 WNT9BO14905 357 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 CEACAM4O75871 244 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 FAM90A15PP0C7V4 464 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 FAM90A13PP0C7W8 464 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 FAM90A14PP0C7W9 464 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 FAM90A24PP0C7X0 464 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 LRP11Q86VZ4 500 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 FAM210BQ96KR6 192 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 MEMO1Q9Y316 297 aa16.37■□□□□ 0.21
LAPTM4B-204ENST00000619747 KALRNO60229 2985 aa16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 SPTBN4Q9H254 2564 aa16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 TGOLN2O43493 480 aa16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 MBPP02686 304 aaPredicted RBP16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 DANCRP0C864 163 aa16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 LRFN3Q9BTN0 628 aa16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 PITPNC1Q9UKF7 332 aa16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 PROCRQ9UNN8 238 aa16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 TRDCB7Z8K6 153 aa16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 K7EPK0 472 aa16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 DFFBO76075 338 aa16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 NXPH3O95157 252 aa16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 IGF2-ASQ6U949 168 aa16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 FAM71E2Q8N5Q1 922 aa16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 RNASE8Q8TDE3 154 aaKnown RBP16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 RNASEH2CQ8TDP1 164 aaKnown RBP16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 MSI2Q96DH6 328 aaKnown RBP16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 PLSCR2Q9NRY7 297 aa16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 ATP23Q9Y6H3 246 aa16.36■□□□□ 0.21
LAPTM4B-204ENST00000619747 CHD3Q12873 2000 aaKnown RBP16.35■□□□□ 0.21
LAPTM4B-204ENST00000619747 MPPED1O15442 326 aa16.35■□□□□ 0.21
LAPTM4B-204ENST00000619747 OR2H2O95918 312 aa16.35■□□□□ 0.21
LAPTM4B-204ENST00000619747 RAC2P15153 192 aa16.35■□□□□ 0.21
LAPTM4B-204ENST00000619747 ERVFC1-1P60608 527 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms