RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 ARHGAP21Q5T5U3 1957 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 IGLV1-36A0A0B4J1U3 117 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 IGKV1D-43A0A0B4J1Z2 117 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 ZNF850A8MQ14 1090 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 ZNF814B7Z6K7 855 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 CDX4O14627 284 aaPredicted RBP13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 MSTNO14793 375 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 SH2D1BO14796 132 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 GYPAP02724 150 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 ZNF823P16415 610 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 PRR27Q6MZM9 219 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 PLPPR1Q8TBJ4 325 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 PARLQ9H300 379 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 ZDHHC11Q9H8X9 412 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 MCTS1Q9ULC4 181 aaKnown RBP13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 TP53TG3Q9ULZ0 132 aa13.54□□□□□ -0.24
SEMA3B-214ENST00000619119 WDR1O75083 606 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 OPRM1P35372 400 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 SUMO3P55854 103 aaPredicted RBP13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 PAFAH1B2P68402 229 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 CARD17Q5XLA6 110 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 C6orf201Q7Z4U5 140 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 PINX1Q96BK5 328 aaKnown RBP13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 WDYHV1Q96HA8 205 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 PECRQ9BY49 303 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 CNOT1A5YKK6 2376 aaKnown RBP13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 TRAV1-1A0A0B4J248 108 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 LIPT2A6NK58 231 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 F2Z2F3 143 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 MMP23AO75900 390 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 BIDP55957 195 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 LINC00310P59036 64 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 EXT1Q16394 746 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 ATOH7Q8N100 152 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 OR51E1Q8TCB6 317 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 CT55Q8WUE5 264 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 SMIM12Q96EX1 92 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 P2RX4Q99571 388 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 FBLN5Q9UBX5 448 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 PXMP4Q9Y6I8 212 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 ODAMA1E959 279 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 ZNF737O75373 536 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 DKK1O94907 266 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 IFNA1P01562 189 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 CD59P13987 128 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 AADACP22760 399 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 SSR4P51571 173 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 RRADP55042 308 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 DHRS13Q6UX07 377 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 BAGE3Q86Y29 109 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 BAGE2Q86Y30 109 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 C1orf174Q8IYL3 243 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 GPR146Q96CH1 333 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 MSI2Q96DH6 328 aaKnown RBP13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 STRADBQ9C0K7 418 aa13.53□□□□□ -0.24
SEMA3B-214ENST00000619119 SHANK1Q9Y566 2161 aa13.52□□□□□ -0.24
SEMA3B-214ENST00000619119 NPIPA2E9PIF3 369 aa13.52□□□□□ -0.24
SEMA3B-214ENST00000619119 TMEM50AO95807 157 aa13.52□□□□□ -0.24
SEMA3B-214ENST00000619119 CTRLP40313 264 aa13.52□□□□□ -0.24
SEMA3B-214ENST00000619119 PPP1CBP62140 327 aa13.52□□□□□ -0.24
SEMA3B-214ENST00000619119 ARL6IP1Q15041 203 aa13.52□□□□□ -0.24
SEMA3B-214ENST00000619119 C6orf15Q6UXA7 325 aaPredicted RBP13.52□□□□□ -0.24
SEMA3B-214ENST00000619119 MRGPRGQ86SM5 289 aa13.52□□□□□ -0.24
SEMA3B-214ENST00000619119 SRP14P37108 136 aaKnown RBP13.52□□□□□ -0.25
SEMA3B-214ENST00000619119 ECI1P42126 302 aa13.52□□□□□ -0.25
SEMA3B-214ENST00000619119 RAET1LQ5VY80 246 aa13.52□□□□□ -0.25
SEMA3B-214ENST00000619119 OR4A47Q6IF82 309 aa13.52□□□□□ -0.25
SEMA3B-214ENST00000619119 RTTNQ86VV8 2226 aa13.52□□□□□ -0.25
SEMA3B-214ENST00000619119 ODF3L1Q8IXM7 274 aa13.52□□□□□ -0.25
SEMA3B-214ENST00000619119 OR5AS1Q8N127 324 aa13.52□□□□□ -0.25
SEMA3B-214ENST00000619119 ASB10Q8WXI3 467 aa13.52□□□□□ -0.25
SEMA3B-214ENST00000619119 FAM71F1Q96KD3 344 aaPredicted RBP13.52□□□□□ -0.25
SEMA3B-214ENST00000619119 DUXBA0A1W2PPF3 345 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 A0A1W2PR80 420 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 A0A1W2PRS3 328 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 SNAI3Q3KNW1 292 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 PPP1R32Q7Z5V6 425 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 RNF138Q8WVD3 245 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 WNT10AQ9GZT5 417 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 ZNF286AQ9HBT8 521 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 PCNX2A6NKB5 2137 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 A0A1W2PNU3 283 aaPredicted RBP13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 K7ERU9 68 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 IFNA5P01569 189 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 C1QL2Q7Z5L3 287 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 ANAPC16Q96DE5 110 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 MEF2BQ02080 365 aaPredicted RBP13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 Q0VFX4 171 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 OR2V1Q8NHB1 315 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 PBOV1Q9GZY1 135 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 C11orf1Q9H5F2 150 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 SLC35D1Q9NTN3 355 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 ALKBH4Q9NXW9 302 aa13.51□□□□□ -0.25
SEMA3B-214ENST00000619119 IGHV3-15A0A0B4J1V0 119 aa13.5□□□□□ -0.25
SEMA3B-214ENST00000619119 C9orf172C9J069 976 aa13.5□□□□□ -0.25
SEMA3B-214ENST00000619119 NBEAP1P0C6P0 100 aa13.5□□□□□ -0.25
SEMA3B-214ENST00000619119 ZNF883P0CG24 379 aa13.5□□□□□ -0.25
SEMA3B-214ENST00000619119 TSPOP30536 169 aa13.5□□□□□ -0.25
SEMA3B-214ENST00000619119 TMEM267Q0VDI3 215 aaPredicted RBP13.5□□□□□ -0.25
SEMA3B-214ENST00000619119 OR4F5Q8NH21 305 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms