RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 CLCF1Q9UBD9 225 aa16.18■□□□□ 0.18
PCDHGB3-202ENST00000618934 METTL1Q9UBP6 276 aaKnown RBP16.18■□□□□ 0.18
PCDHGB3-202ENST00000618934 METRNQ9UJH8 293 aa16.18■□□□□ 0.18
PCDHGB3-202ENST00000618934 MRPL49Q13405 166 aaKnown RBP16.18■□□□□ 0.18
PCDHGB3-202ENST00000618934 FAM180AQ6UWF9 173 aa16.18■□□□□ 0.18
PCDHGB3-202ENST00000618934 TPRX1Q8N7U7 411 aa16.18■□□□□ 0.18
PCDHGB3-202ENST00000618934 SNIP1Q8TAD8 396 aaKnown RBP16.18■□□□□ 0.18
PCDHGB3-202ENST00000618934 NIT2Q9NQR4 276 aa16.18■□□□□ 0.18
PCDHGB3-202ENST00000618934 HEATR1Q9H583 2144 aaKnown RBP16.18■□□□□ 0.18
PCDHGB3-202ENST00000618934 TRAV1-1A0A0B4J248 108 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 G6PCP35575 357 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 RPS10P46783 165 aaKnown RBP16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 ZNF816Q0VGE8 651 aaPredicted RBP16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 ELOBQ15370 118 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 LRRC75BQ2VPJ9 315 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 KHDC3LQ587J8 217 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 PRAMEF6Q5VXH4 476 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 VWA1Q6PCB0 445 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 DPPA3Q6W0C5 159 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 CNEP1R1Q8N9A8 125 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 RCC1LQ96I51 464 aaKnown RBP16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 OR2D2Q9H210 308 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 HES4Q9HCC6 221 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 INTS1Q8N201 2190 aaKnown RBP16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 KRASP01116 189 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 HBE1P02100 147 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 S100A9P06702 114 aaKnown RBP16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 NCMAPQ5T1S8 102 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 FAM90A2PQ658T7 463 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 OR8G2PQ6IF36 304 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 BEND4Q6ZU67 534 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 TMEM178AQ8NBL3 297 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 COQ2Q96H96 371 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 ZNF251Q9BRH9 671 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 RBKSQ9H477 322 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 UFSP2Q9NUQ7 469 aa16.17■□□□□ 0.18
PCDHGB3-202ENST00000618934 CCL11P51671 97 aa16.16■□□□□ 0.18
PCDHGB3-202ENST00000618934 ELLP55199 621 aaPredicted RBP16.16■□□□□ 0.18
PCDHGB3-202ENST00000618934 RPS16P62249 146 aaKnown RBP16.16■□□□□ 0.18
PCDHGB3-202ENST00000618934 RAB11AP62491 216 aa16.16■□□□□ 0.18
PCDHGB3-202ENST00000618934 ZNF787Q6DD87 383 aa16.16■□□□□ 0.18
PCDHGB3-202ENST00000618934 BTNL3Q6UXE8 466 aa16.16■□□□□ 0.18
PCDHGB3-202ENST00000618934 LILRB2Q8N423 598 aa16.16■□□□□ 0.18
PCDHGB3-202ENST00000618934 TVP23CQ96ET8 276 aa16.16■□□□□ 0.18
PCDHGB3-202ENST00000618934 UNKLQ9H9P5 680 aaKnown RBP16.16■□□□□ 0.18
PCDHGB3-202ENST00000618934 EP300Q09472 2414 aaPredicted RBP16.16■□□□□ 0.18
PCDHGB3-202ENST00000618934 TGIF2-C20orf24A0A0A6YYL0 155 aa16.16■□□□□ 0.18
PCDHGB3-202ENST00000618934 PPIHO43447 177 aaKnown RBP16.16■□□□□ 0.18
PCDHGB3-202ENST00000618934 TGFBR3Q03167 851 aa16.16■□□□□ 0.18
PCDHGB3-202ENST00000618934 TLE1Q04724 770 aa16.16■□□□□ 0.18
PCDHGB3-202ENST00000618934 WDR31Q8NA23 367 aa16.16■□□□□ 0.18
PCDHGB3-202ENST00000618934 NIPSNAP3BQ9BS92 247 aa16.16■□□□□ 0.18
PCDHGB3-202ENST00000618934 CACNA1HO95180 2353 aa16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 C17orf98A8MV24 154 aa16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 C1QTNF9BB2RNN3 333 aa16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 J3QW42 95 aa16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 IGKV1D-33P01593 117 aa16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 IGKV1-33P01594 117 aa16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 HBZP02008 142 aa16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 FAM214BQ7L5A3 538 aa16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 MRGPRDQ8TDS7 321 aa16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 WDR61Q9GZS3 305 aaKnown RBP16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 MSL2Q9HCI7 577 aa16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 UBE2L5PA0A1B0GUS4 154 aa16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 AP4M1O00189 453 aa16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 CLN5O75503 358 aa16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 TNFRSF9Q07011 255 aa16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 EIF4EBP1Q13541 118 aaPredicted RBP16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 FDCSPQ8NFU4 85 aa16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 GALMQ96C23 342 aa16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 LOXL4Q96JB6 756 aa16.15■□□□□ 0.18
PCDHGB3-202ENST00000618934 IGHV3-43A0A0B4J1X8 118 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 TMEM30CPA0ZSE6 113 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 S1PR2O95136 353 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 PTBP3O95758 552 aaKnown RBP16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 CLDN1O95832 211 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 IGHV3-43DP0DP04 118 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 CD200P41217 278 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 KIR2DL2P43627 348 aaPredicted RBP16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 RAB2AP61019 212 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 FOXF2Q12947 444 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 Q6ZT83 130 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 ZNF645Q8N7E2 425 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 C9orf106Q8NAJ2 232 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 MBD3L1Q8WWY6 194 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 DCTN5Q9BTE1 182 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 CLN8Q9UBY8 286 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 CADP27708 2225 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 A0A087WWC5 75 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 BCL2P10415 239 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 GLIPR1P48060 266 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 SLC38A11Q08AI6 406 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 GUSBP1Q15486 140 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 C1QL4Q86Z23 238 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 RFESDQ8TAC1 157 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 CA5BP1Q8WTZ4 195 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 KCNIP1Q9NZI2 227 aa16.14■□□□□ 0.17
PCDHGB3-202ENST00000618934 DEFB108AA8MXU0 73 aa16.13■□□□□ 0.17
PCDHGB3-202ENST00000618934 HMGB3O15347 200 aaKnown RBP16.13■□□□□ 0.17
PCDHGB3-202ENST00000618934 YIF1AO95070 293 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms