RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 DENND4CQ5VZ89 1909 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 TDRD6O60522 2096 aaKnown RBP10.57□□□□□ -0.72
MATR3-227ENST00000618441 LRP5LA4QPB2 252 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 FAM166BA8MTA8 275 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 FSTP19883 344 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 PDLIM4P50479 330 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 RPL27P61353 136 aaKnown RBP10.57□□□□□ -0.72
MATR3-227ENST00000618441 OR8I2Q8N0Y5 310 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 PTX4Q96A99 478 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 SHISA8B8ZZ34 492 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 M0R1X1 148 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 SPINT1O43278 529 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 SPRY1O43609 319 aaPredicted RBP10.57□□□□□ -0.72
MATR3-227ENST00000618441 SEMA4FO95754 770 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 TMEM215Q68D42 235 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 RAB11FIP5Q9BXF6 653 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 SERTAD4Q9NUC0 356 aa10.57□□□□□ -0.72
MATR3-227ENST00000618441 ZNF318Q5VUA4 2279 aa10.56□□□□□ -0.72
MATR3-227ENST00000618441 NDUFB4O95168 129 aa10.56□□□□□ -0.72
MATR3-227ENST00000618441 FUT6P51993 359 aa10.56□□□□□ -0.72
MATR3-227ENST00000618441 POU3F1Q03052 451 aaPredicted RBP10.56□□□□□ -0.72
MATR3-227ENST00000618441 VN1R4Q7Z5H5 301 aa10.56□□□□□ -0.72
MATR3-227ENST00000618441 MRPL52Q86TS9 123 aaKnown RBP10.56□□□□□ -0.72
MATR3-227ENST00000618441 KLRC4-KLRK1H3BQV0 150 aa10.56□□□□□ -0.72
MATR3-227ENST00000618441 HAND1O96004 215 aa10.56□□□□□ -0.72
MATR3-227ENST00000618441 GTF2H5Q6ZYL4 71 aa10.56□□□□□ -0.72
MATR3-227ENST00000618441 C3orf85A0A1B0GTC6 90 aa10.56□□□□□ -0.72
MATR3-227ENST00000618441 C2orf72A6NCS6 295 aa10.56□□□□□ -0.72
MATR3-227ENST00000618441 CORTO00230 105 aa10.56□□□□□ -0.72
MATR3-227ENST00000618441 ETV2O00321 342 aaPredicted RBP10.56□□□□□ -0.72
MATR3-227ENST00000618441 ZIC1Q15915 447 aa10.56□□□□□ -0.72
MATR3-227ENST00000618441 FAM69BQ5VUD6 431 aa10.56□□□□□ -0.72
MATR3-227ENST00000618441 LIME1Q9H400 295 aa10.56□□□□□ -0.72
MATR3-227ENST00000618441 ADH5P11766 374 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 CDAP32320 146 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 PLPPR1Q8TBJ4 325 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 DERL1Q9BUN8 251 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 MUC21A0A0G2JKD1 596 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 MUC21A0A140T8X8 626 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 TMEM50AO95807 157 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 FAHP16930 419 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 KISS1Q15726 138 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 MUC21Q5SSG8 566 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 OR2AE1Q8NHA4 323 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 RAB37Q96AX2 223 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 SRSF8Q9BRL6 282 aaKnown RBP10.55□□□□□ -0.72
MATR3-227ENST00000618441 WDR61Q9GZS3 305 aaKnown RBP10.55□□□□□ -0.72
MATR3-227ENST00000618441 NOTCH4Q99466 2003 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 LAMA1P25391 3075 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 C11orf94C9JXX5 98 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 DAP3P51398 398 aaKnown RBP10.55□□□□□ -0.72
MATR3-227ENST00000618441 MZT1Q08AG7 82 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 METRNLQ641Q3 311 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 NHLRC2Q8NBF2 726 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 KIAA1549Q9HCM3 1950 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 H3BML4 177 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 NRASP01111 189 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 KRASP01116 189 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 PGCP20142 388 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 MRPL54Q6P161 138 aaKnown RBP10.55□□□□□ -0.72
MATR3-227ENST00000618441 SMIM20Q8N5G0 67 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 OR2V1Q8NHB1 315 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 HOXB13Q92826 284 aaPredicted RBP10.55□□□□□ -0.72
MATR3-227ENST00000618441 NEIL1Q96FI4 390 aaPredicted RBP10.55□□□□□ -0.72
MATR3-227ENST00000618441 PXMP4Q9Y6I8 212 aa10.55□□□□□ -0.72
MATR3-227ENST00000618441 WDFY4Q6ZS81 3184 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 OR5B21A6NL26 309 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 ZNF732B4DXR9 585 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 HSBP1O75506 76 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 FRMD6-AS1P0C7T7 363 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 SRP14P37108 136 aaKnown RBP10.54□□□□□ -0.72
MATR3-227ENST00000618441 MTCP1P56278 107 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 EGR4Q05215 589 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 ZNF726P1Q15940 193 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 ARHGEF39Q8N4T4 335 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 LMX1AQ8TE12 382 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 C8orf44Q96CB5 159 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 SS18L2Q9UHA2 77 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 M0QXV9 152 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 CEACAM5P06731 702 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 C3orf79P0CE67 100 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 OR1D4P47884 311 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 BAXQ07812 192 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 PRICKLE4Q2TBC4 344 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 ARRDC3Q96B67 414 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 WNT16Q9UBV4 365 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 SSUH2Q9Y2M2 353 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 GPR179Q6PRD1 2367 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 CEP250Q9BV73 2442 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 CACNA1EQ15878 2313 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 EPOPA6NHQ4 379 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 ZNF207O43670 478 aaKnown RBP10.54□□□□□ -0.72
MATR3-227ENST00000618441 CCL2P13500 99 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 USF1P22415 310 aaPredicted RBP10.54□□□□□ -0.72
MATR3-227ENST00000618441 PLP1P60201 277 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 PSG9Q00887 426 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 HLA-BQ31612 363 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 DEFB119Q8N690 84 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 BCORP1Q8N888 145 aa10.54□□□□□ -0.72
MATR3-227ENST00000618441 TMEM116Q8NCL8 245 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms