RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 GTF3AQ92664 365 aaKnown RBP9.26□□□□□ -0.93
POLR2A-209ENST00000617998 UQCC1Q9NVA1 299 aa9.26□□□□□ -0.93
POLR2A-209ENST00000617998 CLCF1Q9UBD9 225 aa9.26□□□□□ -0.93
POLR2A-209ENST00000617998 EXOGQ9Y2C4 368 aaKnown RBP9.26□□□□□ -0.93
POLR2A-209ENST00000617998 C17orf51A8MQB3 221 aa9.26□□□□□ -0.93
POLR2A-209ENST00000617998 OR4P4Q8NGL7 312 aa9.26□□□□□ -0.93
POLR2A-209ENST00000617998 ZNRF4Q8WWF5 429 aa9.26□□□□□ -0.93
POLR2A-209ENST00000617998 JPT1Q9UK76 154 aa9.26□□□□□ -0.93
POLR2A-209ENST00000617998 HSPB11Q9Y547 144 aa9.26□□□□□ -0.93
POLR2A-209ENST00000617998 IGHV3-23P01764 117 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 TDGF1P13385 188 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 COL8A2P25067 703 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 ISL1P61371 349 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 C10orf128Q5T292 105 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 CLEC19AQ6UXS0 136 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 ACP7Q6ZNF0 438 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 PDPNQ86YL7 162 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 OR14K1Q8NGZ2 314 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 SCARB1Q8WTV0 552 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 LINC00527Q9UJ94 153 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 CHD5Q8TDI0 1954 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 C3orf85A0A1B0GTC6 90 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 K7EM74 188 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 MGPP08493 103 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 PTBP1P26599 531 aaKnown RBP eCLIP9.25□□□□□ -0.93
POLR2A-209ENST00000617998 CHATP28329 748 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 MMP15P51511 669 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 TMEM249Q2WGJ8 235 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 RTN4RQ9BZR6 473 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 MED9Q9NWA0 146 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 LINC00312Q9Y6C7 94 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 A0A0D9SG52 128 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 CD24P25063 80 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 RPRMLQ8N4K4 120 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 OR2T35Q8NGX2 323 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 OR2G3Q8NGZ4 309 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 BCL7BQ9BQE9 202 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 PRELID1Q9Y255 219 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 OR2W1Q9Y3N9 320 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 HIST2H3PS2Q5TEC6 136 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 LRRTM1Q86UE6 522 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 C10orf111Q8N326 155 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 MRM2Q9UI43 246 aaKnown RBP9.25□□□□□ -0.93
POLR2A-209ENST00000617998 ZNF207O43670 478 aaKnown RBP9.25□□□□□ -0.93
POLR2A-209ENST00000617998 SLC45A2Q9UMX9 530 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 KPTNQ9Y664 436 aa9.25□□□□□ -0.93
POLR2A-209ENST00000617998 IQCF6A8MYZ5 107 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 ZFPL1O95159 310 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 TIAL1Q01085 375 aaKnown RBP eCLIP9.24□□□□□ -0.93
POLR2A-209ENST00000617998 MGAT2Q10469 447 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 GABARAPL3Q9BY60 117 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 SEC14L6B5MCN3 397 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 SLC25A4P12235 298 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 RPL35AP18077 110 aaKnown RBP9.24□□□□□ -0.93
POLR2A-209ENST00000617998 DUX3Q96PT4 197 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 ZNF331Q9NQX6 463 aaPredicted RBP9.24□□□□□ -0.93
POLR2A-209ENST00000617998 IGHV3OR16-13A0A075B7E8 117 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 ARPC4-TTLL3A0A0A6YYG9 625 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 IGHV3-74A0A0B4J1X5 117 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 SPDEFO95238 335 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 METTL15P1P0C7V9 234 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 MMP16P51512 607 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 SAMD13Q5VXD3 122 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 A0A0B4J2A0 478 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 WT1P19544 449 aaPredicted RBP9.24□□□□□ -0.93
POLR2A-209ENST00000617998 SP6Q3SY56 376 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 PIP4P2Q8N4L2 257 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 OR5P3Q8WZ94 311 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 TMEM133Q9H2Q1 129 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 SHPKQ9UHJ6 478 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 H0YL77 283 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 RD3LP0DJH9 198 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 KLF9Q13886 244 aaPredicted RBP9.24□□□□□ -0.93
POLR2A-209ENST00000617998 RHOUQ7L0Q8 258 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 DTX2Q86UW9 622 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 CYB5R1Q9UHQ9 305 aa9.24□□□□□ -0.93
POLR2A-209ENST00000617998 FNDC1Q4ZHG4 1894 aaPredicted RBP9.24□□□□□ -0.93
POLR2A-209ENST00000617998 TGFBR3LH3BV60 316 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 SLC31A2O15432 143 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 CCL3L1P16619 93 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 G6PCP35575 357 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 CRYBB2P43320 205 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 OR51J1Q9H342 316 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 Q9N2K0 584 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 IGHV3-49A0A0A0MS15 119 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 PLPP2O43688 288 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 MCCD1P59942 119 aaPredicted RBP9.23□□□□□ -0.93
POLR2A-209ENST00000617998 FAM3AP98173 230 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 G6PC2Q9NQR9 355 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 SOX15O60248 233 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 NPBWR2P48146 333 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 CDK5Q00535 292 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 FAM120AOSQ5T036 256 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 HSD17B13Q7Z5P4 300 aaPredicted RBP9.23□□□□□ -0.93
POLR2A-209ENST00000617998 FGF20Q9NP95 211 aaPredicted RBP9.23□□□□□ -0.93
POLR2A-209ENST00000617998 PDGFAP04085 211 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 LIMS3P0CW19 117 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 LIMS4P0CW20 117 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 PMS2P11Q13670 270 aa9.23□□□□□ -0.93
POLR2A-209ENST00000617998 C10orf113Q5VZT2 155 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms