RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 SRSF9Q13242 221 aaKnown RBP eCLIP3.97□□□□□ -1.77
CHD9-221ENST00000615216 COL5A1-AS1Q5SY13 56 aa3.97□□□□□ -1.77
CHD9-221ENST00000615216 ERASQ7Z444 233 aa3.97□□□□□ -1.77
CHD9-221ENST00000615216 OR2I1PQ8NGU4 316 aa3.97□□□□□ -1.77
CHD9-221ENST00000615216 OR10J6PQ8NGY7 276 aa3.97□□□□□ -1.77
CHD9-221ENST00000615216 RBM14Q96PK6 669 aaKnown RBP3.97□□□□□ -1.77
CHD9-221ENST00000615216 NPVFQ9HCQ7 196 aa3.97□□□□□ -1.77
CHD9-221ENST00000615216 CLN8Q9UBY8 286 aa3.97□□□□□ -1.77
CHD9-221ENST00000615216 TINAGQ9UJW2 476 aa3.97□□□□□ -1.77
CHD9-221ENST00000615216 ACAA1P09110 424 aaPredicted RBP3.97□□□□□ -1.77
CHD9-221ENST00000615216 C16orf47Q6ZP98 133 aaPredicted RBP3.97□□□□□ -1.77
CHD9-221ENST00000615216 PRNTQ86SH4 94 aa3.97□□□□□ -1.77
CHD9-221ENST00000615216 STPG3Q8N7X2 389 aa3.97□□□□□ -1.77
CHD9-221ENST00000615216 PMCHL2Q9BQD1 86 aa3.97□□□□□ -1.77
CHD9-221ENST00000615216 ELOVL1Q9BW60 279 aa3.97□□□□□ -1.77
CHD9-221ENST00000615216 IGHV3OR15-7A0A075B7D8 119 aa3.97□□□□□ -1.77
CHD9-221ENST00000615216 TMEM189A5PLL7 270 aa3.97□□□□□ -1.77
CHD9-221ENST00000615216 PATE4P0C8F1 98 aa3.97□□□□□ -1.77
CHD9-221ENST00000615216 ATP6V0CP27449 155 aa3.97□□□□□ -1.77
CHD9-221ENST00000615216 RPL31P62899 125 aaKnown RBP3.97□□□□□ -1.77
CHD9-221ENST00000615216 AMMECR1LQ6DCA0 310 aa3.97□□□□□ -1.77
CHD9-221ENST00000615216 LSM10Q969L4 123 aaKnown RBP3.97□□□□□ -1.77
CHD9-221ENST00000615216 POM121Q96HA1 1249 aa3.97□□□□□ -1.77
CHD9-221ENST00000615216 RPP25Q9BUL9 199 aaKnown RBP3.97□□□□□ -1.77
CHD9-221ENST00000615216 TRAV30A0A087WSZ9 112 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 CEACAM18A8MTB9 384 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 MGST3O14880 152 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 TCL1AP56279 114 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 GAMTQ14353 236 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 C1QL3Q5VWW1 255 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 CYB561D1Q8N8Q1 229 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 TMEM45BQ96B21 275 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 AQP10Q96PS8 301 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 UCN2Q96RP3 112 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 PRR13Q9NZ81 148 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 PXMP4Q9Y6I8 212 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 MPDZO75970 2070 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 TRBV5-7A0A0A0MS05 114 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 M0R3E3 92 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 SPINT1O43278 529 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 NDUFA2O43678 99 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 TSPAN2O60636 221 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 CLDN14O95500 239 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 HLA-DQB1P01920 261 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 MRPL54Q6P161 138 aaKnown RBP3.96□□□□□ -1.77
CHD9-221ENST00000615216 OR4B1Q8NGF8 309 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 RBKSQ9H477 322 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 TUBD1Q9UJT1 453 aa3.96□□□□□ -1.77
CHD9-221ENST00000615216 COL4A1P02462 1669 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 PRR33A8MZF0 331 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 AGFG2O95081 481 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 TCTAP57738 103 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 RPS4XP62701 263 aaKnown RBP3.96□□□□□ -1.78
CHD9-221ENST00000615216 LDLRAD3Q86YD5 345 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 SPNS2Q8IVW8 549 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 MRPL32Q9BYC8 188 aaKnown RBP3.96□□□□□ -1.78
CHD9-221ENST00000615216 KLHDC2Q9Y2U9 406 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 AHRRA9YTQ3 701 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 IGKV1D-16P01601 117 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 TTRP02766 147 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 CSN3P07498 182 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 RPS11P62280 158 aaKnown RBP eCLIP3.96□□□□□ -1.78
CHD9-221ENST00000615216 SLC35B1P78383 322 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 MEF2BQ02080 365 aaPredicted RBP3.96□□□□□ -1.78
CHD9-221ENST00000615216 PMCHL1Q16048 86 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 ECSCRQ19T08 205 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 OR1K1Q8NGR3 316 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 PRDM14Q9GZV8 571 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 S1PR2O95136 353 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 COX5BP10606 129 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 PPP1CCP36873 323 aaKnown RBP3.96□□□□□ -1.78
CHD9-221ENST00000615216 RAB9AP51151 201 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 EIF4EBP2Q13542 120 aaPredicted RBP3.96□□□□□ -1.78
CHD9-221ENST00000615216 SPANXN1Q5VSR9 72 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 FAM222BQ8WU58 562 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 SMIM12Q96EX1 92 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 CDX2Q99626 313 aaPredicted RBP3.96□□□□□ -1.78
CHD9-221ENST00000615216 SFXN3Q9BWM7 321 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 ZNF430Q9H8G1 570 aaPredicted RBP3.96□□□□□ -1.78
CHD9-221ENST00000615216 J3QW42 95 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 EML2O95834 649 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 EFNB2P52799 333 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 SLC25A47Q6Q0C1 308 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 C12orf54Q6X4T0 127 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 SLC16A13Q7RTY0 426 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 OR1N2Q8NGR9 330 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 MRPS16Q9Y3D3 137 aaKnown RBP3.96□□□□□ -1.78
CHD9-221ENST00000615216 FOXS1O43638 330 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 NANOS3P60323 173 aaKnown RBP3.96□□□□□ -1.78
CHD9-221ENST00000615216 LRRC75BQ2VPJ9 315 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 C1orf100Q5SVJ3 147 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 NCMAPQ5T1S8 102 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 EBLN2Q6P2I7 272 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 OR4A5Q8NH83 315 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 DYRK2Q92630 601 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 PILRAQ9UKJ1 303 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 KCNK7Q9Y2U2 307 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 PPIAL4EA0A075B759 164 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 IFITM10A6NMD0 228 aa3.96□□□□□ -1.78
CHD9-221ENST00000615216 FAM157AC9JC47 383 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms