RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 LEUTXA8MZ59 168 aa11.95□□□□□ -0.5
CD48-203ENST00000613788 RAB29O14966 203 aa11.95□□□□□ -0.5
CD48-203ENST00000613788 ST8SIA5O15466 376 aa11.95□□□□□ -0.5
CD48-203ENST00000613788 FSHBP01225 129 aa11.95□□□□□ -0.5
CD48-203ENST00000613788 ZNF735P0CB33 412 aa11.95□□□□□ -0.5
CD48-203ENST00000613788 SCGB2B2Q4G0G5 96 aa11.95□□□□□ -0.5
CD48-203ENST00000613788 LYG1Q8N1E2 194 aa11.95□□□□□ -0.5
CD48-203ENST00000613788 OR51S1Q8NGJ8 323 aa11.95□□□□□ -0.5
CD48-203ENST00000613788 MOB3AQ96BX8 217 aa11.95□□□□□ -0.5
CD48-203ENST00000613788 MS4A7Q9GZW8 240 aaPredicted RBP11.95□□□□□ -0.5
CD48-203ENST00000613788 GSX1Q9H4S2 264 aaPredicted RBP11.95□□□□□ -0.5
CD48-203ENST00000613788 SLC2A8Q9NY64 477 aa11.95□□□□□ -0.5
CD48-203ENST00000613788 DPM3Q9P2X0 92 aa11.95□□□□□ -0.5
CD48-203ENST00000613788 RNF150Q9ULK6 438 aa11.95□□□□□ -0.5
CD48-203ENST00000613788 CSPG4Q6UVK1 2322 aa11.94□□□□□ -0.5
CD48-203ENST00000613788 ACANP16112 2415 aa11.94□□□□□ -0.5
CD48-203ENST00000613788 SAA4P35542 130 aa11.94□□□□□ -0.5
CD48-203ENST00000613788 SRP14P37108 136 aaKnown RBP11.94□□□□□ -0.5
CD48-203ENST00000613788 ECI1P42126 302 aa11.94□□□□□ -0.5
CD48-203ENST00000613788 GPR12P47775 334 aa11.94□□□□□ -0.5
CD48-203ENST00000613788 FXYD4P59646 89 aa11.94□□□□□ -0.5
CD48-203ENST00000613788 DEFA1P59665 94 aa11.94□□□□□ -0.5
CD48-203ENST00000613788 DEFA3P59666 94 aa11.94□□□□□ -0.5
CD48-203ENST00000613788 LPCAT3Q6P1A2 487 aa11.94□□□□□ -0.5
CD48-203ENST00000613788 LHFPL1Q86WI0 220 aa11.94□□□□□ -0.5
CD48-203ENST00000613788 PIP4P2Q8N4L2 257 aa11.94□□□□□ -0.5
CD48-203ENST00000613788 MALSU1Q96EH3 234 aa11.94□□□□□ -0.5
CD48-203ENST00000613788 S1PR3Q99500 378 aa11.94□□□□□ -0.5
CD48-203ENST00000613788 OR2D2Q9H210 308 aa11.94□□□□□ -0.5
CD48-203ENST00000613788 IFI27L2Q9H2X8 130 aa11.94□□□□□ -0.5
CD48-203ENST00000613788 ZNRD1Q9P1U0 126 aa11.94□□□□□ -0.5
CD48-203ENST00000613788 GAB2Q9UQC2 676 aa11.94□□□□□ -0.5
CD48-203ENST00000613788 PLA2G10O15496 165 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 LYRM1O43325 122 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 EPHA1P21709 976 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 ZNF137PP52743 207 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 UCP3P55916 312 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 IFITM3Q01628 133 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 AADACL3Q5VUY0 350 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 RUSC1-AS1Q66K80 236 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 MZT2BQ6NZ67 158 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 BRD3OSQ6XYD6 125 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 IDO2Q6ZQW0 420 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 ZNF645Q8N7E2 425 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.93□□□□□ -0.5
CD48-203ENST00000613788 SECTM1Q8WVN6 248 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 TOMM40LQ969M1 308 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 ABHD14BQ96IU4 210 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 BEX2Q9BXY8 128 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 SLC5A7Q9GZV3 580 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 PALMDQ9NP74 551 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 CDC42EP3Q9UKI2 254 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 FAM96BQ9Y3D0 163 aa11.93□□□□□ -0.5
CD48-203ENST00000613788 IGKV1D-13A0A0B4J2D9 117 aa11.92□□□□□ -0.5
CD48-203ENST00000613788 OR5H14A6NHG9 310 aa11.92□□□□□ -0.5
CD48-203ENST00000613788 LY6LH3BQJ8 138 aa11.92□□□□□ -0.5
CD48-203ENST00000613788 IGKV1-13P0DP09 117 aa11.92□□□□□ -0.5
CD48-203ENST00000613788 SCGB2A2Q13296 93 aa11.92□□□□□ -0.5
CD48-203ENST00000613788 ASAH1Q13510 395 aa11.92□□□□□ -0.5
CD48-203ENST00000613788 PLA1AQ53H76 456 aa11.92□□□□□ -0.5
CD48-203ENST00000613788 C9orf139Q6ZV77 190 aa11.92□□□□□ -0.5
CD48-203ENST00000613788 LHFPL4Q7Z7J7 247 aa11.92□□□□□ -0.5
CD48-203ENST00000613788 ODF3L1Q8IXM7 274 aa11.92□□□□□ -0.5
CD48-203ENST00000613788 RPEQ96AT9 228 aa11.92□□□□□ -0.5
CD48-203ENST00000613788 SCGB3A2Q96PL1 93 aa11.92□□□□□ -0.5
CD48-203ENST00000613788 SAA2-SAA4A0A096LPE2 208 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 OOSP1A8MZH6 123 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 GAPDHP04406 335 aaKnown RBP11.91□□□□□ -0.5
CD48-203ENST00000613788 SAA2P0DJI9 122 aaPredicted RBP11.91□□□□□ -0.5
CD48-203ENST00000613788 PGAM2P15259 253 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 SURF2Q15527 256 aaPredicted RBP11.91□□□□□ -0.5
CD48-203ENST00000613788 MSMO1Q15800 293 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 TPTE2P1Q5T6R2 138 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 FAM71F2Q6NXP2 309 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 IL17RELQ6ZVW7 336 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 Q71RC1 249 aaPredicted RBP11.91□□□□□ -0.5
CD48-203ENST00000613788 LDLRAD3Q86YD5 345 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 ZBTB34Q8NCN2 500 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 ZFAND1Q8TCF1 268 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 ST6GALNAC6Q969X2 333 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 AKR1E2Q96JD6 320 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 SLC25A21Q9BQT8 299 aaPredicted RBP11.91□□□□□ -0.5
CD48-203ENST00000613788 CCL28Q9NRJ3 127 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 HIVEP1P15822 2718 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 HSD17B6O14756 317 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 TXNL1O43396 289 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 FBP1P09467 338 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 S100GP29377 79 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 ARHGDIBP52566 201 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 DCTN2Q13561 401 aaKnown RBP11.91□□□□□ -0.5
CD48-203ENST00000613788 SSX2Q16385 188 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 CCDC144NLQ6NUI1 221 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 ZNF833PQ6ZTB9 187 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 TGIF2LXQ8IUE1 241 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 CMTM1Q8IZ96 169 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 SLC38A6Q8IZM9 456 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 OR13C8Q8NGS7 320 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 FXYD6Q9H0Q3 95 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 SDHAF2Q9NX18 166 aa11.91□□□□□ -0.5
CD48-203ENST00000613788 TBC1D24Q9ULP9 559 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms