RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 OPN1MW3P0DN78 364 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 MST1LQ2TV78 715 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 MKI67P46013 3256 aaKnown RBP7.4□□□□□ -1.22
LIG4-204ENST00000611712 NEURL1O76050 574 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 CHRNA7P36544 502 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 GALR1P47211 349 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 TMEM105Q8N8V8 129 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 ZBTB34Q8NCN2 500 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 DEFB124Q8NES8 71 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 OR4D5Q8NGN0 318 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 MRPL30Q8TCC3 161 aaKnown RBP7.4□□□□□ -1.22
LIG4-204ENST00000611712 H1FXQ92522 213 aaKnown RBP7.4□□□□□ -1.22
LIG4-204ENST00000611712 R3HDM4Q96D70 268 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 BTF3L4Q96K17 158 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 NAT8Q9UHE5 227 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 ZNF320A2RRD8 509 aa7.4□□□□□ -1.23
LIG4-204ENST00000611712 TMEM210A6NLX4 147 aa7.4□□□□□ -1.23
LIG4-204ENST00000611712 SEC14L6B5MCN3 397 aa7.4□□□□□ -1.23
LIG4-204ENST00000611712 MDKP21741 143 aaPredicted RBP7.4□□□□□ -1.23
LIG4-204ENST00000611712 ERVS71-1P61550 626 aa7.4□□□□□ -1.23
LIG4-204ENST00000611712 ZNF880Q6PDB4 577 aa7.4□□□□□ -1.23
LIG4-204ENST00000611712 FAM214BQ7L5A3 538 aa7.4□□□□□ -1.23
LIG4-204ENST00000611712 DRAM1Q8N682 238 aa7.4□□□□□ -1.23
LIG4-204ENST00000611712 SAMD10Q9BYL1 202 aa7.4□□□□□ -1.23
LIG4-204ENST00000611712 LIME1Q9H400 295 aa7.4□□□□□ -1.23
LIG4-204ENST00000611712 LAMA2P24043 3122 aaKnown RBP7.39□□□□□ -1.23
LIG4-204ENST00000611712 C9orf172C9J069 976 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 CCL20P78556 96 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 GABRA6Q16445 453 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 ZNF343Q6P1L6 599 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 TAF15Q92804 592 aaKnown RBP eCLIP7.39□□□□□ -1.23
LIG4-204ENST00000611712 NEIL1Q96FI4 390 aaPredicted RBP7.39□□□□□ -1.23
LIG4-204ENST00000611712 RFNGQ9Y644 331 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 F6UZH7 168 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 PHOX2AO14813 284 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 PAGE4O60829 102 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 TRGC2P03986 189 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 GFRA1P56159 465 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 RPS23P62266 143 aaKnown RBP7.39□□□□□ -1.23
LIG4-204ENST00000611712 SLC35E3Q7Z769 313 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 LYG1Q8N1E2 194 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 SNX22Q96L94 193 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 DYNLRB1Q9NP97 96 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 CHD7Q9P2D1 2997 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 TRGV10A0A0A0MS01 117 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 C9JQL5 133 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 K7N7A8 449 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 NTF4P34130 210 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 ID3Q02535 119 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 KLF14Q8TD94 323 aaPredicted RBP7.39□□□□□ -1.23
LIG4-204ENST00000611712 LSM10Q969L4 123 aaKnown RBP7.39□□□□□ -1.23
LIG4-204ENST00000611712 RBKSQ9H477 322 aa7.39□□□□□ -1.23
LIG4-204ENST00000611712 CTXND1A0A1B0GTU2 59 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 COLCA2A8K830 154 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 NKX2-8O15522 239 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 COL10A1Q03692 680 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 ZNF90Q03938 601 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 DIDO1Q9BTC0 2240 aaKnown RBP7.38□□□□□ -1.23
LIG4-204ENST00000611712 IGKV3D-15A0A087WSY6 115 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 TGIF2-C20orf24A0A0A6YYL0 155 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 TRAV24A0A0B4J272 114 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 AQP7O14520 342 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 SRP19P09132 144 aaKnown RBP7.38□□□□□ -1.23
LIG4-204ENST00000611712 GZMHP20718 246 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 GNG10P50151 68 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 TRAT1Q6PIZ9 186 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 CISD2Q8N5K1 135 aaKnown RBP7.38□□□□□ -1.23
LIG4-204ENST00000611712 RNF138Q8WVD3 245 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 HSD17B10Q99714 261 aaKnown RBP7.38□□□□□ -1.23
LIG4-204ENST00000611712 C5orf42Q9H799 3197 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 NKX6-3A6NJ46 265 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 C11orf94C9JXX5 98 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 WNT9BO14905 357 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 ENSAO43768 121 aaKnown RBP7.38□□□□□ -1.23
LIG4-204ENST00000611712 OR7C2O60412 319 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 TNFRSF9Q07011 255 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 OR10A7Q8NGE5 316 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 C22orf15Q8WYQ4 148 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 SPSB4Q96A44 273 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 FER1L5A0AVI2 2057 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 LRRC30A6NM36 301 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 CELA3BP08861 270 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 MGST1P10620 155 aaKnown RBP7.38□□□□□ -1.23
LIG4-204ENST00000611712 MEF2BQ02080 365 aaPredicted RBP7.38□□□□□ -1.23
LIG4-204ENST00000611712 ZNF506Q5JVG8 444 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 ASCL4Q6XD76 172 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 BAGE3Q86Y29 109 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 BAGE2Q86Y30 109 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 ZNF645Q8N7E2 425 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 BCL2L2Q92843 193 aaPredicted RBP7.38□□□□□ -1.23
LIG4-204ENST00000611712 DECR2Q9NUI1 292 aa7.38□□□□□ -1.23
LIG4-204ENST00000611712 AURKAIP1Q9NWT8 199 aaPredicted RBP7.38□□□□□ -1.23
LIG4-204ENST00000611712 IGHV3OR15-7A0A075B7D8 119 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 SPAARA0A1B0GVQ0 90 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 NAPSAO96009 420 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 IGLV3-1P01715 115 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 APOA2P02652 100 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 PRDX2P32119 198 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 KLF3P57682 345 aaPredicted RBP7.37□□□□□ -1.23
LIG4-204ENST00000611712 HABP2Q14520 560 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms