RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 CX3CL1P78423 397 aa10.35□□□□□ -0.75
POLR2J3-219ENST00000608621 NDPQ00604 133 aa10.35□□□□□ -0.75
POLR2J3-219ENST00000608621 ACSM3Q53FZ2 586 aa10.35□□□□□ -0.75
POLR2J3-219ENST00000608621 RPL39P5Q59GN2 51 aa10.35□□□□□ -0.75
POLR2J3-219ENST00000608621 C19orf54Q5BKX5 351 aa10.35□□□□□ -0.75
POLR2J3-219ENST00000608621 FAM131AQ6UXB0 335 aa10.35□□□□□ -0.75
POLR2J3-219ENST00000608621 GLDNQ6ZMI3 551 aaPredicted RBP10.35□□□□□ -0.75
POLR2J3-219ENST00000608621 AHSA2Q719I0 299 aa10.35□□□□□ -0.75
POLR2J3-219ENST00000608621 OVCH2Q7RTZ1 564 aa10.35□□□□□ -0.75
POLR2J3-219ENST00000608621 THRSPQ92748 146 aa10.35□□□□□ -0.75
POLR2J3-219ENST00000608621 TOLLIPQ9H0E2 274 aa10.35□□□□□ -0.75
POLR2J3-219ENST00000608621 TPSG1Q9NRR2 321 aa10.35□□□□□ -0.75
POLR2J3-219ENST00000608621 PLCXD1Q9NUJ7 323 aa10.35□□□□□ -0.75
POLR2J3-219ENST00000608621 PIPOXQ9P0Z9 390 aa10.35□□□□□ -0.75
POLR2J3-219ENST00000608621 PSORS1C1Q9UIG5 152 aa10.35□□□□□ -0.75
POLR2J3-219ENST00000608621 A3GALT2U3KPV4 340 aa10.35□□□□□ -0.75
POLR2J3-219ENST00000608621 IGHV4OR15-8A0A075B7B6 117 aa10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 A0A087WW49 117 aa10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 RAB29O14966 203 aa10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 GNAO1P09471 354 aa10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 EGR2P11161 476 aaPredicted RBP10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 CRIP2P52943 208 aaPredicted RBP10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 GABPB1Q06547 395 aaPredicted RBP10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 TMEM267Q0VDI3 215 aaPredicted RBP10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 PLGLAQ15195 96 aa10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 C1orf100Q5SVJ3 147 aa10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 GLT8D1Q68CQ7 371 aa10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 FAM71F2Q6NXP2 309 aa10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 LRRTM1Q86UE6 522 aa10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 C8orf59Q8N0T1 100 aaPredicted RBP10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 PACRGLQ8N7B6 248 aa10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 BPIFB6Q8NFQ5 453 aa10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 SETD6Q8TBK2 473 aa10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 ABHD14BQ96IU4 210 aa10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 NICN1Q9BSH3 213 aa10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 GHITMQ9H3K2 345 aa10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 CHMP1AQ9HD42 196 aaPredicted RBP10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 SLC23A1Q9UHI7 598 aa10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 FOXA2Q9Y261 457 aaPredicted RBP10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 HUWE1Q7Z6Z7 4374 aaKnown RBP10.34□□□□□ -0.75
POLR2J3-219ENST00000608621 H7C2Y5 167 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 EBAG9O00559 213 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 NAPSAO96009 420 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 GSTP1P09211 210 aaKnown RBP10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 LGALS1P09382 135 aaKnown RBP10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 MC5RP33032 325 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 ACSM6Q6P461 480 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 ZNF880Q6PDB4 577 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 PPP1R27Q86WC6 154 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 SVOPQ8N4V2 548 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 MS4A15Q8N5U1 240 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 TCTEX1D1Q8N7M0 179 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 KCNG3Q8TAE7 436 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 ABHD5Q8WTS1 349 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 MS4A10Q96PG2 267 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 RCHY1Q96PM5 261 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 CLCC1Q96S66 551 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 TM2D1Q9BX74 207 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 TMEM59Q9BXS4 323 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 PARP12Q9H0J9 701 aaKnown RBP10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 KCNK15Q9H427 330 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 C8orf4Q9NR00 106 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 PLEKHJ1Q9NW61 149 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 GAB2Q9UQC2 676 aa10.33□□□□□ -0.76
POLR2J3-219ENST00000608621 OR5H14A6NHG9 310 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 H0YJW9 148 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 IGHV3-11P01762 117 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 HSPB1P04792 205 aaKnown RBP10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 FRMD6-AS1P0C7T7 363 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 SNRPBP14678 240 aaKnown RBP10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 GP9P14770 177 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 SRMP19623 302 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 CEACAM6P40199 344 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 UNC119Q13432 240 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 AKIRIN2Q53H80 203 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 RBM48Q5RL73 367 aaKnown RBP10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 CASC10Q5T4H9 136 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 CD200R1LQ6Q8B3 271 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 UNQ5815/PRO19632Q6UWF5 114 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 OR5AN1Q8NGI8 311 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 MUC7Q8TAX7 377 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 PHYHIPQ92561 330 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 ARPC1AQ92747 370 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 AGMATQ9BSE5 352 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 FAM103A1Q9BTL3 118 aaKnown RBP10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 TMED9Q9BVK6 235 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 C11orf54Q9H0W9 315 aaPredicted RBP10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 FKBP14Q9NWM8 211 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 RNF150Q9ULK6 438 aa10.32□□□□□ -0.76
POLR2J3-219ENST00000608621 A0A0A6YYD4 124 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 TRIM64CA6NLI5 447 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 TMEM14DPA8MWL7 114 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 ITGB1BP1O14713 200 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 PROP1O75360 226 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 RBBP9O75884 186 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 CD37P11049 281 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 QRFPP83859 136 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 PSG5Q15238 335 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 ACTBL2Q562R1 376 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 PYHIN1Q6K0P9 492 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms