RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 PTHP01270 115 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 OR13C7P0DN81 318 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 IL1RNP18510 177 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 FGF7P21781 194 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 LOXP28300 417 aaPredicted RBP3.39□□□□□ -1.87
LINC00397-202ENST00000606785 CD70P32970 193 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 SULT1A1P50225 295 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 SULT1A2P50226 295 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 TCL1AP56279 114 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 TPI1P60174 286 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 GNG11P61952 73 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 HBA1P69905 142 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 FABP9Q0Z7S8 132 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 EDDM3AQ14507 147 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 TMEM97Q5BJF2 176 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 COL5A1-AS1Q5SY13 56 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 AKR1C8PQ5T2L2 129 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 TOMM20LQ6UXN7 152 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 NAA40Q86UY6 237 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 SNX29P2Q8IUI4 249 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 LRRC25Q8N386 305 aaPredicted RBP3.39□□□□□ -1.87
LINC00397-202ENST00000606785 ZNF676Q8N7Q3 588 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 OR4D11Q8NGI4 311 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 OR13C6PQ8NH95 151 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 HAVCR2Q8TDQ0 301 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 RNF138Q8WVD3 245 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 CYGBQ8WWM9 190 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 GALMQ96C23 342 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 IMP4Q96G21 291 aaKnown RBP3.39□□□□□ -1.87
LINC00397-202ENST00000606785 BTF3L4Q96K17 158 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 SMIM8Q96KF7 97 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 FAM19A4Q96LR4 140 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 LINC00052Q96N35 136 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 OR2A5Q96R48 311 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 SIGMAR1Q99720 223 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 C20orf144Q9BQM9 153 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 NKX6-2Q9C056 277 aaPredicted RBP3.39□□□□□ -1.87
LINC00397-202ENST00000606785 CST9LQ9H4G1 147 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 RDH14Q9HBH5 336 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 U3KQ87 197 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 ARHGAP21Q5T5U3 1957 aa3.39□□□□□ -1.87
LINC00397-202ENST00000606785 ADAMTS9Q9P2N4 1935 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 PLCH2O75038 1416 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 IGLV1-50A0A075B6I6 118 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 TRAV30A0A087WSZ9 112 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 IGHV5-10-1A0A0J9YXX1 117 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 CENPVL3A0A0U1RRI6 287 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 TMEM218A2RU14 115 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 PINLYPA6NC86 204 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 C11orf94C9JXX5 98 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 LINC01619G3V211 115 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 CCL25O15444 150 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 STK16O75716 305 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 CNMDO75829 334 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 UPK1BO75841 260 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 GYPCP04921 128 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 CRYBA1P05813 215 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 MPC1LP0DKB6 136 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 CD79AP11912 226 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 HLA-EP13747 358 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 APLNRP35414 380 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 TMBIM6P55061 237 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 DLX6P56179 175 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 DEFA1P59665 94 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 DEFA3P59666 94 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 SLC35A1P78382 337 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 PRKCDQ05655 676 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 OR2F1Q13607 317 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 ZNF235Q14590 738 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 LTC4SQ16873 150 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 TBC1D28Q2M2D7 210 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 PYY3Q5JQD4 70 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 ACTL10Q5JWF8 245 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 CST9Q5W186 159 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 RASSF6Q6ZTQ3 369 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 GLT6D1Q7Z4J2 308 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 H1FOOQ8IZA3 346 aaPredicted RBP3.38□□□□□ -1.87
LINC00397-202ENST00000606785 C15orf56Q8N910 161 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 SFXN5Q8TD22 340 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 EEF1AKMT1Q8WVE0 214 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 CANT1Q8WVQ1 401 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 LCN9Q8WX39 176 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 HYLS1Q96M11 299 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 RDH12Q96NR8 316 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 GPR22Q99680 433 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 HSD17B10Q99714 261 aaKnown RBP3.38□□□□□ -1.87
LINC00397-202ENST00000606785 RSPO3Q9BXY4 272 aaPredicted RBP3.38□□□□□ -1.87
LINC00397-202ENST00000606785 REG4Q9BYZ8 158 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 FBXO6Q9NRD1 293 aaPredicted RBP3.38□□□□□ -1.87
LINC00397-202ENST00000606785 TMEM38BQ9NVV0 291 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 SPANXCQ9NY87 97 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.38□□□□□ -1.87
LINC00397-202ENST00000606785 BRCA1P38398 1863 aaKnown RBP3.38□□□□□ -1.87
LINC00397-202ENST00000606785 MYH4Q9Y623 1939 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 PTPRJQ12913 1337 aa3.38□□□□□ -1.87
LINC00397-202ENST00000606785 ADGRL2O95490 1459 aa3.37□□□□□ -1.87
LINC00397-202ENST00000606785 IGHV2OR16-5A0A0B4J2B6 119 aa3.37□□□□□ -1.87
LINC00397-202ENST00000606785 TINCRA0A1B0GVN0 87 aa3.37□□□□□ -1.87
LINC00397-202ENST00000606785 A0A1B0GVX0 72 aa3.37□□□□□ -1.87
LINC00397-202ENST00000606785 A0A1B0GX12 115 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms