RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 SLC23A1Q9UHI7 598 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 TRAPPC2LQ9UL33 140 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 KPTNQ9Y664 436 aa8.3□□□□□ -1.08
UPF1-213ENST00000601981 SONP18583 2426 aaKnown RBP8.3□□□□□ -1.08
UPF1-213ENST00000601981 TRGV10A0A0A0MS01 117 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 CRYM-AS1A6NIL9 109 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 DBX1A6NMT0 343 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 G3V3Q6 166 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 M0R1W7 72 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 BET1O15155 118 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 RCC1P18754 421 aaPredicted RBP8.29□□□□□ -1.08
UPF1-213ENST00000601981 PI3P19957 117 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 NFYAP23511 347 aaPredicted RBP8.29□□□□□ -1.08
UPF1-213ENST00000601981 P2RX3P56373 397 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 H2BFSP57053 126 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 FXYD4P59646 89 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 PAX2Q02962 417 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 PAX8Q06710 450 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 ABCA11PQ4W5N1 156 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 KRBOX4Q5JUW0 171 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 LY6G6FQ5SQ64 297 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 FAM120AOSQ5T036 256 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 C6orf183Q5T699 404 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 LIN54Q6MZP7 749 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 TRAT1Q6PIZ9 186 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 Q71RC1 249 aaPredicted RBP8.29□□□□□ -1.08
UPF1-213ENST00000601981 SGPP2Q8IWX5 399 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 CCDC71LQ8N9Z2 235 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 LY6G5BQ8NDX9 201 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 NANPQ8TBE9 248 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 CASTOR1Q8WTX7 329 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 COQ2Q96H96 371 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 TMPRSS13Q9BYE2 586 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 GAL3ST2Q9H3Q3 398 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 NCOR1P1Q9H4R4 102 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 RAB9BQ9NP90 201 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 KCNIP1Q9NZI2 227 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 OR6C3Q9NZP0 311 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 OPN4Q9UHM6 478 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 LINC00312Q9Y6C7 94 aa8.29□□□□□ -1.08
UPF1-213ENST00000601981 NAV3Q8IVL0 2385 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 SNAPC5O75971 98 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 TOX4O94842 621 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 IFNA2P01563 188 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 PIGPP57054 158 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 RND3P61587 244 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 ARF6P62330 175 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 AESQ08117 197 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 C1orf122Q6ZSJ8 110 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 H1FOOQ8IZA3 346 aaPredicted RBP8.28□□□□□ -1.08
UPF1-213ENST00000601981 FGFRL1Q8N441 504 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 ZNF565Q8N9K5 539 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 OR10J5Q8NHC4 309 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 GALNT14Q96FL9 552 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 KIRREL1Q96J84 757 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 ZNF714Q96N38 554 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 PCGF1Q9BSM1 259 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 CHIAQ9BZP6 476 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 NAA60Q9H7X0 242 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 METTL8Q9H825 291 aaKnown RBP8.28□□□□□ -1.08
UPF1-213ENST00000601981 TAF9BQ9HBM6 251 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 RAB18Q9NP72 206 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 SLC2A9Q9NRM0 540 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 C19orf12Q9NSK7 152 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 KIF25Q9UIL4 384 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 UBE2J1Q9Y385 318 aaPredicted RBP8.28□□□□□ -1.08
UPF1-213ENST00000601981 OR2W1Q9Y3N9 320 aa8.28□□□□□ -1.08
UPF1-213ENST00000601981 NSD1Q96L73 2696 aaPredicted RBP8.28□□□□□ -1.08
UPF1-213ENST00000601981 TEX13DA0A0J9YY54 714 aaPredicted RBP8.27□□□□□ -1.09
UPF1-213ENST00000601981 ODAMA1E959 279 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 INAFM1C9JVW0 142 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 FCN3O75636 299 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 SIX6O95475 246 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 RBP4P02753 201 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 SRD5A1P18405 259 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 ERVFRD-1P60508 538 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 SLC9A3R2Q15599 337 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 ANKRD55Q3KP44 614 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 GPR157Q5UAW9 335 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 NCR3LG1Q68D85 454 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 TMEM200BQ69YZ2 307 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 KCTD9Q7L273 389 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 C9orf62Q8N4C0 152 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 ZBTB8BQ8NAP8 495 aaPredicted RBP8.27□□□□□ -1.09
UPF1-213ENST00000601981 RTN4IP1Q8WWV3 396 aaPredicted RBP8.27□□□□□ -1.09
UPF1-213ENST00000601981 SUCNR1Q9BXA5 334 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 TOLLIPQ9H0E2 274 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 TAS2R3Q9NYW6 316 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 KCNIP3Q9Y2W7 256 aa8.27□□□□□ -1.09
UPF1-213ENST00000601981 IGKV1D-13A0A0B4J2D9 117 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 ZNF729A6NN14 1252 aaPredicted RBP8.26□□□□□ -1.09
UPF1-213ENST00000601981 C12orf77C9JDV5 145 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 GPR31O00270 319 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 IGKV1-13P0DP09 117 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 HOXB4P17483 251 aaPredicted RBP8.26□□□□□ -1.09
UPF1-213ENST00000601981 GNRHRP30968 328 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 GLIPR1P48060 266 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 BPIFB3P59826 476 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 FGL1Q08830 312 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 PHLDA2Q53GA4 152 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms