RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 PAQR4Q8N4S7 273 aaPredicted RBP9□□□□□ -0.97
LIG1-220ENST00000601091 CYYR1Q96J86 154 aa9□□□□□ -0.97
LIG1-220ENST00000601091 OR51I2Q9H344 312 aa9□□□□□ -0.97
LIG1-220ENST00000601091 CLN8Q9UBY8 286 aa9□□□□□ -0.97
LIG1-220ENST00000601091 A0A0J9YW62 118 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 A0A1B0GU03 582 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 ZNF732B4DXR9 585 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 ZNF207O43670 478 aaKnown RBP8.99□□□□□ -0.97
LIG1-220ENST00000601091 UMODP07911 640 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 AREGP15514 252 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 MSMO1Q15800 293 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 HIST1H2BLQ99880 126 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 BET1LQ9NYM9 111 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 FBLN5Q9UBX5 448 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 ESPL1Q14674 2120 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 LAMA1P25391 3075 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 C3orf85A0A1B0GTC6 90 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 WIPF3A6NGB9 483 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 CST7O76096 145 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 TIAF1O95411 115 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 GABRA2P47869 451 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 NRIP2Q9BQI9 281 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 FSCN3Q9NQT6 498 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 PARP11Q9NR21 331 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 THYN1Q9P016 225 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 COL4A3Q01955 1670 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 LRP5LA4QPB2 252 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 DNPH1O43598 174 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 GCGP01275 180 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 CCL4P13236 92 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 TMEM50BP56557 158 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 PRR31Q5SQ13 230 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 CDCP2Q5VXM1 449 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 C12orf54Q6X4T0 127 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 LYZL2Q7Z4W2 148 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 C17orf82Q86X59 251 aaPredicted RBP8.99□□□□□ -0.97
LIG1-220ENST00000601091 APOBEC3DQ96AK3 386 aaPredicted RBP8.99□□□□□ -0.97
LIG1-220ENST00000601091 AP1S3Q96PC3 154 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 P2RX4Q99571 388 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.99□□□□□ -0.97
LIG1-220ENST00000601091 DOCK8Q8NF50 2099 aa8.99□□□□□ -0.97
LIG1-220ENST00000601091 RAMP1O60894 148 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 SULT1A2P50226 295 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 GPM6AP51674 278 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 SRSF2Q01130 221 aaKnown RBP8.98□□□□□ -0.97
LIG1-220ENST00000601091 NFAM1Q8NET5 270 aaPredicted RBP8.98□□□□□ -0.97
LIG1-220ENST00000601091 CARHSP1Q9Y2V2 147 aaKnown RBP8.98□□□□□ -0.97
LIG1-220ENST00000601091 AMDHD2Q9Y303 409 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 KIF26AQ9ULI4 1882 aaPredicted RBP8.98□□□□□ -0.97
LIG1-220ENST00000601091 GAGE12BA1L429 117 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 GAPDHP04406 335 aaKnown RBP8.98□□□□□ -0.97
LIG1-220ENST00000601091 USF1P22415 310 aaPredicted RBP8.98□□□□□ -0.97
LIG1-220ENST00000601091 OTX1P32242 354 aaPredicted RBP8.98□□□□□ -0.97
LIG1-220ENST00000601091 PERPQ96FX8 193 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 NAA38Q9BRA0 125 aaKnown RBP8.98□□□□□ -0.97
LIG1-220ENST00000601091 SLC35B3Q9H1N7 401 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 TMEM38BQ9NVV0 291 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 TRAV30A0A087WSZ9 112 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 FAM24AA6NFZ4 105 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 CELA2AP08217 269 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 MPZP25189 248 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 P2RY1P47900 373 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 ARG2P78540 354 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 PIGYQ3MUY2 71 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 OR52E5Q8NH55 327 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 IP6K3Q96PC2 410 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 QTRT1Q9BXR0 403 aaKnown RBP8.98□□□□□ -0.97
LIG1-220ENST00000601091 SLC39A9Q9NUM3 307 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 PEF1Q9UBV8 284 aaKnown RBP8.98□□□□□ -0.97
LIG1-220ENST00000601091 SMPXQ9UHP9 88 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 CELSR3Q9NYQ7 3312 aa8.98□□□□□ -0.97
LIG1-220ENST00000601091 A0A1W2PQM1 296 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 CDIPTO14735 213 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 TUSC2O75896 110 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 TRGC2P03986 189 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 SEC11BP0C7V7 166 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 CFPP27918 469 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 UQCRFS1P47985 274 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 CFHR1Q03591 330 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 C1QL2Q7Z5L3 287 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 UBALD2Q8IYN6 164 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 RNASEH2CQ8TDP1 164 aaKnown RBP8.97□□□□□ -0.97
LIG1-220ENST00000601091 TBX15Q96SF7 602 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 LOXL2Q9Y4K0 774 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 IGLV3-12A0A075B6K2 115 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 ZFP92A6NM28 416 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 MPPED1O15442 326 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 GNG3P63215 75 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 EIF3IQ13347 325 aaKnown RBP8.97□□□□□ -0.97
LIG1-220ENST00000601091 TMEM211Q6ICI0 200 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 TMEM18Q96B42 140 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 TRIB1Q96RU8 372 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 GPR27Q9NS67 375 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 FKBP11Q9NYL4 201 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 KIAA1671Q9BY89 1806 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 RP1L1Q8IWN7 2480 aaPredicted RBP8.97□□□□□ -0.97
LIG1-220ENST00000601091 MSGN1A6NI15 193 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 DEDDO75618 318 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 CLDN1O95832 211 aa8.97□□□□□ -0.97
LIG1-220ENST00000601091 PPYP01298 95 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms