RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	CLPSL1	A2RUU4	121 aa		10.45	□□□□□ -0.74
SRRM1-223	ENST00000600523	ST8SIA5	O15466	376 aa		10.45	□□□□□ -0.74
SRRM1-223	ENST00000600523	HPGDS	O60760	199 aa		10.45	□□□□□ -0.74
SRRM1-223	ENST00000600523	OR2F2	O95006	317 aa		10.45	□□□□□ -0.74
SRRM1-223	ENST00000600523	SNRNP70	P08621	437 aa	Known RBP	10.45	□□□□□ -0.74
SRRM1-223	ENST00000600523	CD24	P25063	80 aa		10.45	□□□□□ -0.74
SRRM1-223	ENST00000600523	CD1B	P29016	333 aa		10.45	□□□□□ -0.74
SRRM1-223	ENST00000600523	TAS2R20	P59543	309 aa		10.45	□□□□□ -0.74
SRRM1-223	ENST00000600523	SPCS2	Q15005	226 aa		10.45	□□□□□ -0.74
SRRM1-223	ENST00000600523	IGSF11	Q5DX21	431 aa		10.45	□□□□□ -0.74
SRRM1-223	ENST00000600523	BEST4	Q8NFU0	473 aa		10.45	□□□□□ -0.74
SRRM1-223	ENST00000600523	ST6GALNAC6	Q969X2	333 aa		10.45	□□□□□ -0.74
SRRM1-223	ENST00000600523	RBM14	Q96PK6	669 aa	Known RBP	10.45	□□□□□ -0.74
SRRM1-223	ENST00000600523	C11orf54	Q9H0W9	315 aa	Predicted RBP	10.45	□□□□□ -0.74
SRRM1-223	ENST00000600523	ANXA10	Q9UJ72	324 aa		10.45	□□□□□ -0.74
SRRM1-223	ENST00000600523	ELF5	Q9UKW6	265 aa	Predicted RBP	10.45	□□□□□ -0.74
SRRM1-223	ENST00000600523	MMP24	Q9Y5R2	645 aa		10.45	□□□□□ -0.74
SRRM1-223	ENST00000600523	SAA2-SAA4	A0A096LPE2	208 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523		H3BMQ9	156 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	TSPAN9	O75954	239 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	TPPP	O94811	219 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	IGKV1D-33	P01593	117 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	IGKV1-33	P01594	117 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	EIF4E	P06730	217 aa	Known RBP	10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	SAA2	P0DJI9	122 aa	Predicted RBP	10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	ELK1	P19419	428 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	FAM53A	Q6NSI3	398 aa	Predicted RBP	10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523		Q6ZPA2	131 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523		Q6ZSV7	163 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	ZNF833P	Q6ZTB9	187 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	C5orf24	Q7Z6I8	188 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	OR8H1	Q8NGG4	311 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	IFI27L2	Q9H2X8	130 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	C16orf95	Q9H693	158 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	SCPEP1	Q9HB40	452 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	NECAP2	Q9NVZ3	263 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	NDUFA13	Q9P0J0	144 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	RABL2A	Q9UBK7	228 aa	Predicted RBP	10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	RSL24D1	Q9UHA3	163 aa	Known RBP	10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	RABL2B	Q9UNT1	228 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	MOB4	Q9Y3A3	225 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	RNF114	Q9Y508	228 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	CUBN	O60494	3623 aa		10.44	□□□□□ -0.74
SRRM1-223	ENST00000600523	FAM90A9P	A6NNJ1	464 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	NCBP2L	A6PVI3	153 aa	Known RBP	10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	ZNF701	M0R085	212 aa	Predicted RBP	10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	HAX1	O00165	279 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	CHST1	O43916	411 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	SSX5	O60225	188 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	SLC22A5	O76082	557 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	MOS	P00540	346 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	OR8U9	P0C7N5	309 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	MDK	P21741	143 aa	Predicted RBP	10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	MC5R	P33032	325 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	OR3A3	P47888	321 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	TAS2R46	P59540	309 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	CBX3	Q13185	183 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	DIAPH2-AS1	Q14236	149 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	HABP2	Q14520	560 aa	Predicted RBP	10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	HNF4G	Q14541	408 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	HERPUD1	Q15011	391 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	HOGA1	Q86XE5	327 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	OR8U1	Q8NH10	309 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	DYNC2LI1	Q8TCX1	351 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	CFHR4	Q92496	578 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	ABHD14B	Q96IU4	210 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	C6orf62	Q9GZU0	229 aa	Predicted RBP	10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	EXTL2	Q9UBQ6	330 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	RNF150	Q9ULK6	438 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	CEPT1	Q9Y6K0	416 aa		10.43	□□□□□ -0.74
SRRM1-223	ENST00000600523	IGHV3-72	A0A0B4J1Y9	119 aa		10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	IGKV1-6	A0A0C4DH72	117 aa		10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	OR5H14	A6NHG9	310 aa		10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523		H7C2Y5	167 aa		10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	SULT1C2	O00338	296 aa		10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	APOA2	P02652	100 aa		10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	LUM	P51884	338 aa	Predicted RBP	10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	TAGLN	Q01995	201 aa	Known RBP	10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	LSAMP	Q13449	338 aa		10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	SHISA2	Q6UWI4	295 aa		10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	CCBE1	Q6UXH8	406 aa	Predicted RBP	10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	SNX29P2	Q8IUI4	249 aa		10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	MCFD2	Q8NI22	146 aa		10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	LINC01006	Q8NI28	216 aa		10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	BORCS5	Q969J3	196 aa		10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	AGMAT	Q9BSE5	352 aa		10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	TOLLIP	Q9H0E2	274 aa		10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	OR2D2	Q9H210	308 aa		10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	COL6A5	A8TX70	2615 aa		10.42	□□□□□ -0.74
SRRM1-223	ENST00000600523	IGKV1D-8	A0A087WSZ0	117 aa		10.41	□□□□□ -0.74
SRRM1-223	ENST00000600523	FGF16	O43320	207 aa		10.41	□□□□□ -0.74
SRRM1-223	ENST00000600523	S100A5	P33763	92 aa		10.41	□□□□□ -0.74
SRRM1-223	ENST00000600523	RELB	Q01201	579 aa		10.41	□□□□□ -0.74
SRRM1-223	ENST00000600523	EBI3	Q14213	229 aa		10.41	□□□□□ -0.74
SRRM1-223	ENST00000600523	C9orf152	Q5JTZ5	239 aa		10.41	□□□□□ -0.74
SRRM1-223	ENST00000600523	ODF3L1	Q8IXM7	274 aa		10.41	□□□□□ -0.74
SRRM1-223	ENST00000600523	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.41	□□□□□ -0.74
SRRM1-223	ENST00000600523	OR5AP2	Q8NGF4	316 aa		10.41	□□□□□ -0.74
SRRM1-223	ENST00000600523	OR5H2	Q8NGV7	314 aa		10.41	□□□□□ -0.74

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