RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 WI2-2373I1.2A0A1W2PRP0 233 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 FOXI3A8MTJ6 420 aaPredicted RBP12.36□□□□□ -0.43
VRK3-221ENST00000600284 SOCS1O15524 211 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 NDUFA3O95167 84 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 SLC2A2P11168 524 aaPredicted RBP12.36□□□□□ -0.43
VRK3-221ENST00000600284 ZBTB25P24278 435 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 MC5RP33032 325 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 HSPA13P48723 471 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 RAB11BQ15907 218 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 C5orf64Q2M2E5 130 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 DEFB121Q5J5C9 76 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 LIN54Q6MZP7 749 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 LCNL1Q6ZST4 164 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 OR5M8Q8NGP6 311 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 SETD6Q8TBK2 473 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 MYOZ3Q8TDC0 251 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 C4orf3Q8WVX3 66 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 EDARADDQ8WWZ3 215 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 RITA1Q96K30 269 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 MGLLQ99685 303 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 AGMATQ9BSE5 352 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 CCDC90BQ9GZT6 254 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 KIAA1456Q9P272 454 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 AK3Q9UIJ7 227 aa12.36□□□□□ -0.43
VRK3-221ENST00000600284 IGHV7-81A0A0B4J1V7 117 aa12.35□□□□□ -0.43
VRK3-221ENST00000600284 OR5H14A6NHG9 310 aa12.35□□□□□ -0.43
VRK3-221ENST00000600284 ST8SIA5O15466 376 aa12.35□□□□□ -0.43
VRK3-221ENST00000600284 RAMP3O60896 148 aa12.35□□□□□ -0.43
VRK3-221ENST00000600284 CALRP27797 417 aaKnown RBP12.35□□□□□ -0.43
VRK3-221ENST00000600284 TMEM50BP56557 158 aa12.35□□□□□ -0.43
VRK3-221ENST00000600284 P2RY14Q15391 338 aa12.35□□□□□ -0.43
VRK3-221ENST00000600284 TMEM65Q6PI78 240 aa12.35□□□□□ -0.43
VRK3-221ENST00000600284 OR56B1Q8NGI3 324 aa12.35□□□□□ -0.43
VRK3-221ENST00000600284 FAM3DQ96BQ1 224 aa12.35□□□□□ -0.43
VRK3-221ENST00000600284 RBMXL1Q96E39 390 aaKnown RBP12.35□□□□□ -0.43
VRK3-221ENST00000600284 UBE2E2Q96LR5 201 aa12.35□□□□□ -0.43
VRK3-221ENST00000600284 DUX3Q96PT4 197 aa12.35□□□□□ -0.43
VRK3-221ENST00000600284 RNF5Q99942 180 aa12.35□□□□□ -0.43
VRK3-221ENST00000600284 Q9N2K0 584 aa12.35□□□□□ -0.43
VRK3-221ENST00000600284 C12orf4Q9NQ89 552 aa12.35□□□□□ -0.43
VRK3-221ENST00000600284 V9GY05 133 aa12.35□□□□□ -0.43
VRK3-221ENST00000600284 ERICH4A6NGS2 130 aa12.34□□□□□ -0.43
VRK3-221ENST00000600284 RBBP9O75884 186 aa12.34□□□□□ -0.43
VRK3-221ENST00000600284 IGLV1-40P01703 118 aa12.34□□□□□ -0.43
VRK3-221ENST00000600284 CT45A6P0DMU7 189 aa12.34□□□□□ -0.43
VRK3-221ENST00000600284 CT45A5P0DMU8 189 aa12.34□□□□□ -0.43
VRK3-221ENST00000600284 CT45A7P0DMV0 189 aa12.34□□□□□ -0.43
VRK3-221ENST00000600284 CNTFRP26992 372 aa12.34□□□□□ -0.43
VRK3-221ENST00000600284 CEACAM6P40199 344 aa12.34□□□□□ -0.43
VRK3-221ENST00000600284 VEGFCP49767 419 aa12.34□□□□□ -0.43
VRK3-221ENST00000600284 HLA-DRB3P79483 266 aa12.34□□□□□ -0.43
VRK3-221ENST00000600284 DGCR2P98153 550 aa12.34□□□□□ -0.43
VRK3-221ENST00000600284 FABP5Q01469 135 aa12.34□□□□□ -0.43
VRK3-221ENST00000600284 TBCEQ15813 527 aaPredicted RBP12.34□□□□□ -0.43
VRK3-221ENST00000600284 C2orf76Q3KRA6 126 aa12.34□□□□□ -0.43
VRK3-221ENST00000600284 OR5AN1Q8NGI8 311 aa12.34□□□□□ -0.43
VRK3-221ENST00000600284 PTX4Q96A99 478 aa12.34□□□□□ -0.43
VRK3-221ENST00000600284 PECRQ9BY49 303 aa12.34□□□□□ -0.43
VRK3-221ENST00000600284 BLOC1S6Q9UL45 172 aa12.34□□□□□ -0.43
VRK3-221ENST00000600284 TRAV41A0A0B4J266 112 aa12.33□□□□□ -0.44
VRK3-221ENST00000600284 LDLRAD4O15165 306 aa12.33□□□□□ -0.44
VRK3-221ENST00000600284 ATP6V0E1O15342 81 aa12.33□□□□□ -0.44
VRK3-221ENST00000600284 HSPA12AO43301 675 aa12.33□□□□□ -0.44
VRK3-221ENST00000600284 DENRO43583 198 aaKnown RBP12.33□□□□□ -0.44
VRK3-221ENST00000600284 CRIP2P52943 208 aaPredicted RBP12.33□□□□□ -0.44
VRK3-221ENST00000600284 RAB25P57735 213 aa12.33□□□□□ -0.44
VRK3-221ENST00000600284 RUNX1Q01196 453 aa12.33□□□□□ -0.44
VRK3-221ENST00000600284 FHL3Q13643 280 aa12.33□□□□□ -0.44
VRK3-221ENST00000600284 DEFB136Q30KP8 78 aa12.33□□□□□ -0.44
VRK3-221ENST00000600284 RPL39P5Q59GN2 51 aa12.33□□□□□ -0.44
VRK3-221ENST00000600284 C9orf66Q5T8R8 295 aa12.33□□□□□ -0.44
VRK3-221ENST00000600284 ZNF660Q6AZW8 331 aaPredicted RBP12.33□□□□□ -0.44
VRK3-221ENST00000600284 ZNF491Q8N8L2 437 aa12.33□□□□□ -0.44
VRK3-221ENST00000600284 MINDY2Q8NBR6 621 aa12.33□□□□□ -0.44
VRK3-221ENST00000600284 ARHGAP5-AS1Q96IT6 56 aa12.33□□□□□ -0.44
VRK3-221ENST00000600284 CMSS1Q9BQ75 279 aaKnown RBP12.33□□□□□ -0.44
VRK3-221ENST00000600284 HDHD3Q9BSH5 251 aaPredicted RBP12.33□□□□□ -0.44
VRK3-221ENST00000600284 C11orf54Q9H0W9 315 aaPredicted RBP12.33□□□□□ -0.44
VRK3-221ENST00000600284 RAB22AQ9UL26 194 aa12.33□□□□□ -0.44
VRK3-221ENST00000600284 VSIG4Q9Y279 399 aa12.33□□□□□ -0.44
VRK3-221ENST00000600284 WSB1Q9Y6I7 421 aa12.33□□□□□ -0.44
VRK3-221ENST00000600284 TRAV1-2A0A0B4J238 106 aa12.32□□□□□ -0.44
VRK3-221ENST00000600284 G3V318 75 aa12.32□□□□□ -0.44
VRK3-221ENST00000600284 H0YJW9 148 aa12.32□□□□□ -0.44
VRK3-221ENST00000600284 RRHO14718 337 aa12.32□□□□□ -0.44
VRK3-221ENST00000600284 PDCD5O14737 125 aa12.32□□□□□ -0.44
VRK3-221ENST00000600284 SCTP09683 121 aa12.32□□□□□ -0.44
VRK3-221ENST00000600284 MAP2K4P45985 399 aa12.32□□□□□ -0.44
VRK3-221ENST00000600284 RAB9AP51151 201 aa12.32□□□□□ -0.44
VRK3-221ENST00000600284 KIAA0141Q14154 515 aaPredicted RBP12.32□□□□□ -0.44
VRK3-221ENST00000600284 FAM131AQ6UXB0 335 aa12.32□□□□□ -0.44
VRK3-221ENST00000600284 ZNF367Q7RTV3 350 aa12.32□□□□□ -0.44
VRK3-221ENST00000600284 TCTEX1D1Q8N7M0 179 aa12.32□□□□□ -0.44
VRK3-221ENST00000600284 OR11H1Q8NG94 326 aa12.32□□□□□ -0.44
VRK3-221ENST00000600284 ABHD14BQ96IU4 210 aa12.32□□□□□ -0.44
VRK3-221ENST00000600284 TOLLIPQ9H0E2 274 aa12.32□□□□□ -0.44
VRK3-221ENST00000600284 KLK15Q9H2R5 256 aa12.32□□□□□ -0.44
VRK3-221ENST00000600284 PARP11Q9NR21 331 aa12.32□□□□□ -0.44
VRK3-221ENST00000600284 OR1A1Q9P1Q5 309 aa12.32□□□□□ -0.44
VRK3-221ENST00000600284 WASHC3Q9Y3C0 194 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms