RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 OR4D5Q8NGN0 318 aa9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 ATG101Q9BSB4 218 aa9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 ZNF318Q5VUA4 2279 aa9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 OR5H1A6NKK0 313 aa9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 ZNF705GA8MUZ8 300 aaPredicted RBP9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 CYB5BO43169 146 aa9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 CLDN1O95832 211 aa9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 S100A8P05109 93 aa9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 RAC2P15153 192 aa9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 CDPF1Q6NVV7 123 aa9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 FAM185AQ8N0U4 392 aa9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 UBAC2Q8NBM4 344 aa9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 NECAP1Q8NC96 275 aa9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 TOLLIPQ9H0E2 274 aa9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 ZNF71Q9NQZ8 489 aaPredicted RBP9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 CLCF1Q9UBD9 225 aa9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 CARHSP1Q9Y2V2 147 aaKnown RBP9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 MED13LQ71F56 2210 aa9.74□□□□□ -0.85
ARHGEF1-220ENST00000600274 CLN5O75503 358 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 CDS2O95674 445 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 AKR1C8PQ5T2L2 129 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 Q6P435 159 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 LRRC29Q8WV35 223 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 SAT2Q96F10 170 aaPredicted RBP9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 SMIM8Q96KF7 97 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 RSG1Q9BU20 258 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 PLEKHF2Q9H8W4 249 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 RELNP78509 3460 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 FAM90A10PA6NDY2 464 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 FAM90A18PA6NE21 464 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 FAM90A16PA6NEW6 464 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 FAM90A20PA6NIJ5 464 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 FAM90A8PA6NJQ4 464 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 FAM90A7PA6NKC0 464 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 FAM90A22PA8MWA6 464 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 FAM90A12PA8MX19 464 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 FAM90A5PA8MXJ8 464 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 FAM90A23PA8MXZ1 464 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 ST8SIA5O15466 376 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 SS18L1O75177 396 aaPredicted RBP9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 PTBP3O95758 552 aaKnown RBP9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 HEXAP06865 529 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 FAM90A15PP0C7V4 464 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 FAM90A13PP0C7W8 464 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 FAM90A14PP0C7W9 464 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 FAM90A24PP0C7X0 464 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 G6PCP35575 357 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 EIF2S3P41091 472 aaKnown RBP9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 CCL20P78556 96 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 ZNF324BQ6AW86 544 aaPredicted RBP9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 LCN15Q6UWW0 184 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 SLC25A31Q9H0C2 315 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 RIMS4Q9H426 269 aaPredicted RBP9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 PSG11Q9UQ72 335 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 RAB11AP62491 216 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 NKX6-1P78426 367 aaPredicted RBP9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 ZNF718Q3SXZ3 478 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 LEAP2Q969E1 77 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 GNG12Q9UBI6 72 aa9.73□□□□□ -0.85
ARHGEF1-220ENST00000600274 RAMP3O60896 148 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 NDUFB7P17568 137 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 FGF8P55075 233 aaPredicted RBP9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 RPL23AP62750 156 aaKnown RBP9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 COL10A1Q03692 680 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 ACSF3Q4G176 576 aaPredicted RBP9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 INO80CQ6PI98 192 aaPredicted RBP9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 DMRTC2Q8IXT2 367 aaPredicted RBP9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 C15orf54Q8N8G6 183 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 GALMQ96C23 342 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 PKIBQ9C010 78 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 PLSCR2Q9NRY7 297 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 CACFD1Q9UGQ2 172 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 C12orf77C9JDV5 145 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 AP4M1O00189 453 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 GAPDHP04406 335 aaKnown RBP9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 FABP4P15090 132 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 UCP1P25874 307 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 ZNF266Q14584 549 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 BATFQ16520 125 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 Q3ZCU0 254 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 H1FOOQ8IZA3 346 aaPredicted RBP9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 DRAM1Q8N682 238 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 ZNF383Q8NA42 475 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 PSENENQ9NZ42 101 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 GNG13Q9P2W3 67 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 KIAA1324LA8MWY0 1029 aaPredicted RBP9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 PRR33A8MZF0 331 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 H0Y980 276 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 IFNA5P01569 189 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 HBZP02008 142 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 PGA5P0DJD9 388 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 TESK1Q15569 626 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 BTNL8Q6UX41 500 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 BHLHA15Q7RTS1 189 aaPredicted RBP9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 LRTM2Q8N967 370 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 LURAP1Q96LR2 239 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 GP6Q9HCN6 339 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 PARP11Q9NR21 331 aa9.72□□□□□ -0.85
ARHGEF1-220ENST00000600274 SCAF4O95104 1147 aaKnown RBP9.71□□□□□ -0.85
ARHGEF1-220ENST00000600274 H2AFB1P0C5Y9 115 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms