RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 IFI27L2Q9H2X8 130 aa16.32■□□□□ 0.2
PNKP-212ENST00000599454 SMPD3Q9NY59 655 aaPredicted RBP16.32■□□□□ 0.2
PNKP-212ENST00000599454 FBXO7Q9Y3I1 522 aa16.32■□□□□ 0.2
PNKP-212ENST00000599454 NUBP2Q9Y5Y2 271 aa16.32■□□□□ 0.2
PNKP-212ENST00000599454 A0A1W2PPK0 400 aa16.31■□□□□ 0.2
PNKP-212ENST00000599454 TRIM64CA6NLI5 447 aa16.31■□□□□ 0.2
PNKP-212ENST00000599454 RAB29O14966 203 aa16.31■□□□□ 0.2
PNKP-212ENST00000599454 RBBP9O75884 186 aa16.31■□□□□ 0.2
PNKP-212ENST00000599454 HSPB1P04792 205 aaKnown RBP16.31■□□□□ 0.2
PNKP-212ENST00000599454 MC5RP33032 325 aa16.31■□□□□ 0.2
PNKP-212ENST00000599454 PLGLAQ15195 96 aa16.31■□□□□ 0.2
PNKP-212ENST00000599454 FAM131AQ6UXB0 335 aa16.31■□□□□ 0.2
PNKP-212ENST00000599454 PQLC1Q8N2U9 271 aa16.31■□□□□ 0.2
PNKP-212ENST00000599454 NEDD4LQ96PU5 975 aa16.31■□□□□ 0.2
PNKP-212ENST00000599454 DERL3Q96Q80 235 aa16.31■□□□□ 0.2
PNKP-212ENST00000599454 TM2D3Q9BRN9 247 aa16.31■□□□□ 0.2
PNKP-212ENST00000599454 FBXL15Q9H469 300 aa16.31■□□□□ 0.2
PNKP-212ENST00000599454 LDLRAD4O15165 306 aa16.3■□□□□ 0.2
PNKP-212ENST00000599454 CD40LGP29965 261 aa16.3■□□□□ 0.2
PNKP-212ENST00000599454 LRRC36Q1X8D7 754 aa16.3■□□□□ 0.2
PNKP-212ENST00000599454 AKIRIN2Q53H80 203 aa16.3■□□□□ 0.2
PNKP-212ENST00000599454 ACTBL2Q562R1 376 aa16.3■□□□□ 0.2
PNKP-212ENST00000599454 ABHD5Q8WTS1 349 aa16.3■□□□□ 0.2
PNKP-212ENST00000599454 RNF5Q99942 180 aa16.3■□□□□ 0.2
PNKP-212ENST00000599454 ELOVL1Q9BW60 279 aa16.3■□□□□ 0.2
PNKP-212ENST00000599454 SLA2Q9H6Q3 261 aa16.3■□□□□ 0.2
PNKP-212ENST00000599454 S100A14Q9HCY8 104 aa16.3■□□□□ 0.2
PNKP-212ENST00000599454 A8MZ25 164 aa16.29■□□□□ 0.2
PNKP-212ENST00000599454 CD1AP06126 327 aa16.29■□□□□ 0.2
PNKP-212ENST00000599454 UBBP0CG47 229 aa16.29■□□□□ 0.2
PNKP-212ENST00000599454 MAPK3P27361 379 aaPredicted RBP16.29■□□□□ 0.2
PNKP-212ENST00000599454 C5orf24Q7Z6I8 188 aa16.29■□□□□ 0.2
PNKP-212ENST00000599454 FAM46BQ96A09 425 aa16.29■□□□□ 0.2
PNKP-212ENST00000599454 SLC23A1Q9UHI7 598 aa16.29■□□□□ 0.2
PNKP-212ENST00000599454 STUB1Q9UNE7 303 aa16.29■□□□□ 0.2
PNKP-212ENST00000599454 WASHC3Q9Y3C0 194 aa16.29■□□□□ 0.2
PNKP-212ENST00000599454 A3GALT2U3KPV4 340 aa16.29■□□□□ 0.2
PNKP-212ENST00000599454 ST8SIA5O15466 376 aa16.28■□□□□ 0.2
PNKP-212ENST00000599454 HSPA12AO43301 675 aa16.28■□□□□ 0.2
PNKP-212ENST00000599454 BAG2O95816 211 aa16.28■□□□□ 0.2
PNKP-212ENST00000599454 GSTP1P09211 210 aaKnown RBP16.28■□□□□ 0.2
PNKP-212ENST00000599454 CT45A6P0DMU7 189 aa16.28■□□□□ 0.2
PNKP-212ENST00000599454 CT45A5P0DMU8 189 aa16.28■□□□□ 0.2
PNKP-212ENST00000599454 CT45A7P0DMV0 189 aa16.28■□□□□ 0.2
PNKP-212ENST00000599454 EGR2P11161 476 aaPredicted RBP16.28■□□□□ 0.2
PNKP-212ENST00000599454 SRSF7Q16629 238 aaKnown RBP eCLIP16.28■□□□□ 0.2
PNKP-212ENST00000599454 UNQ5815/PRO19632Q6UWF5 114 aa16.28■□□□□ 0.2
PNKP-212ENST00000599454 PPP1R27Q86WC6 154 aa16.28■□□□□ 0.2
PNKP-212ENST00000599454 SGPP2Q8IWX5 399 aa16.28■□□□□ 0.2
PNKP-212ENST00000599454 CASTOR1Q8WTX7 329 aa16.28■□□□□ 0.2
PNKP-212ENST00000599454 IL1F10Q8WWZ1 152 aa16.28■□□□□ 0.2
PNKP-212ENST00000599454 RHOVQ96L33 236 aa16.28■□□□□ 0.2
PNKP-212ENST00000599454 SULT4A1Q9BR01 284 aa16.28■□□□□ 0.2
PNKP-212ENST00000599454 H0YJW9 148 aa16.27■□□□□ 0.2
PNKP-212ENST00000599454 ITGB1BP1O14713 200 aa16.27■□□□□ 0.2
PNKP-212ENST00000599454 IGHV3-11P01762 117 aa16.27■□□□□ 0.2
PNKP-212ENST00000599454 TPPP2P59282 170 aa16.27■□□□□ 0.2
PNKP-212ENST00000599454 ZNF562Q6V9R5 426 aa16.27■□□□□ 0.2
PNKP-212ENST00000599454 MOB1BQ7L9L4 216 aa16.27■□□□□ 0.2
PNKP-212ENST00000599454 SETD9Q8NE22 299 aa16.27■□□□□ 0.2
PNKP-212ENST00000599454 OR5AN1Q8NGI8 311 aa16.27■□□□□ 0.2
PNKP-212ENST00000599454 ISOC1Q96CN7 298 aa16.27■□□□□ 0.2
PNKP-212ENST00000599454 CYYR1Q96J86 154 aa16.27■□□□□ 0.2
PNKP-212ENST00000599454 CNOT2Q9NZN8 540 aaKnown RBP16.27■□□□□ 0.2
PNKP-212ENST00000599454 SACSQ9NZJ4 4579 aa16.26■□□□□ 0.19
PNKP-212ENST00000599454 PNMA8CA0A1B0GUJ8 204 aa16.26■□□□□ 0.19
PNKP-212ENST00000599454 EFCAB10A6NFE3 127 aa16.26■□□□□ 0.19
PNKP-212ENST00000599454 H7C2Y5 167 aa16.26■□□□□ 0.19
PNKP-212ENST00000599454 FCN1O00602 326 aa16.26■□□□□ 0.19
PNKP-212ENST00000599454 IGLV1-51P01701 117 aa16.26■□□□□ 0.19
PNKP-212ENST00000599454 TFAP2AP05549 437 aa16.26■□□□□ 0.19
PNKP-212ENST00000599454 IGHV4-30-4P0DP06 118 aa16.26■□□□□ 0.19
PNKP-212ENST00000599454 ST3GAL4Q11206 333 aa16.26■□□□□ 0.19
PNKP-212ENST00000599454 RPL39P5Q59GN2 51 aa16.26■□□□□ 0.19
PNKP-212ENST00000599454 ZNF880Q6PDB4 577 aa16.26■□□□□ 0.19
PNKP-212ENST00000599454 Q8N1Y9 231 aa16.26■□□□□ 0.19
PNKP-212ENST00000599454 SVOPQ8N4V2 548 aa16.26■□□□□ 0.19
PNKP-212ENST00000599454 C19orf73Q9NVV2 129 aa16.26■□□□□ 0.19
PNKP-212ENST00000599454 SLC22A1O15245 554 aa16.25■□□□□ 0.19
PNKP-212ENST00000599454 NAPSAO96009 420 aa16.25■□□□□ 0.19
PNKP-212ENST00000599454 CELP19835 753 aa16.25■□□□□ 0.19
PNKP-212ENST00000599454 ZP3P21754 424 aa16.25■□□□□ 0.19
PNKP-212ENST00000599454 TTC23Q5W5X9 447 aa16.25■□□□□ 0.19
PNKP-212ENST00000599454 ANKRD13BQ86YJ7 626 aa16.25■□□□□ 0.19
PNKP-212ENST00000599454 LFNGQ8NES3 379 aa16.25■□□□□ 0.19
PNKP-212ENST00000599454 EDARADDQ8WWZ3 215 aa16.25■□□□□ 0.19
PNKP-212ENST00000599454 FAAP24Q9BTP7 215 aa16.25■□□□□ 0.19
PNKP-212ENST00000599454 TMEM59Q9BXS4 323 aa16.25■□□□□ 0.19
PNKP-212ENST00000599454 RIMS4Q9H426 269 aaPredicted RBP16.25■□□□□ 0.19
PNKP-212ENST00000599454 EDA2RQ9HAV5 297 aa16.25■□□□□ 0.19
PNKP-212ENST00000599454 RANGRFQ9HD47 186 aaPredicted RBP16.25■□□□□ 0.19
PNKP-212ENST00000599454 METTL1Q9UBP6 276 aaKnown RBP16.25■□□□□ 0.19
PNKP-212ENST00000599454 SPDEFO95238 335 aa16.24■□□□□ 0.19
PNKP-212ENST00000599454 RPS27AP62979 156 aaKnown RBP16.24■□□□□ 0.19
PNKP-212ENST00000599454 ZFAND6Q6FIF0 208 aa16.24■□□□□ 0.19
PNKP-212ENST00000599454 GLDNQ6ZMI3 551 aaPredicted RBP16.24■□□□□ 0.19
PNKP-212ENST00000599454 C6orf201Q7Z4U5 140 aa16.24■□□□□ 0.19
PNKP-212ENST00000599454 GGHQ92820 318 aa16.24■□□□□ 0.19
PNKP-212ENST00000599454 MS4A10Q96PG2 267 aa16.24■□□□□ 0.19
PNKP-212ENST00000599454 TSNAXQ99598 290 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms