RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 NPFFR1Q9GZQ6 430 aa15.77■□□□□ 0.12
SHKBP1-214ENST00000597396 C11orf54Q9H0W9 315 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-214ENST00000597396 IFI27L2Q9H2X8 130 aa15.77■□□□□ 0.12
SHKBP1-214ENST00000597396 CCDC59Q9P031 241 aaKnown RBP15.77■□□□□ 0.12
SHKBP1-214ENST00000597396 MRPS7Q9Y2R9 242 aaKnown RBP15.77■□□□□ 0.12
SHKBP1-214ENST00000597396 SAA2-SAA4A0A096LPE2 208 aa15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 TRBV6-7A0A0A0MS04 114 aa15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 IGHV3-72A0A0B4J1Y9 119 aa15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 RGS5O15539 181 aa15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 SAA2P0DJI9 122 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 MDKP21741 143 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 CBX5P45973 191 aa15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 COMPP49747 757 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 C16orf82Q7Z2V1 217 aa15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 THNSL2Q86YJ6 484 aa15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 ODF3L1Q8IXM7 274 aa15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 OR4C13Q8NGP0 309 aa15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 ABHD14BQ96IU4 210 aa15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 AKR1E2Q96JD6 320 aa15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 S1PR3Q99500 378 aa15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 SLC25A33Q9BSK2 321 aa15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 BEX1Q9HBH7 125 aa15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 IFT46Q9NQC8 304 aa15.76■□□□□ 0.11
SHKBP1-214ENST00000597396 A0A1B0GUS0 222 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 MEIS3P1A6NDR6 274 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 FAM90A9PA6NNJ1 464 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 RAB29O14966 203 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 IGKV1D-33P01593 117 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 IGKV1-33P01594 117 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 CTXN2P0C2S0 81 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 TMEM11P17152 192 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 OR3A3P47888 321 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 ARPC4P59998 168 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 CNIH2Q6PI25 160 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 GVQW1Q8N7I0 195 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 BEST4Q8NFU0 473 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 TOLLIPQ9H0E2 274 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 GHITMQ9H3K2 345 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 RANBP3Q9H6Z4 567 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 ANXA10Q9UJ72 324 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 ZNF221Q9UK13 617 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 ADAM30Q9UKF2 790 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 RNF150Q9ULK6 438 aa15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 RBM7Q9Y580 266 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-214ENST00000597396 TSPAN9O75954 239 aa15.74■□□□□ 0.11
SHKBP1-214ENST00000597396 OR2F2O95006 317 aa15.74■□□□□ 0.11
SHKBP1-214ENST00000597396 FCER2P06734 321 aa15.74■□□□□ 0.11
SHKBP1-214ENST00000597396 CD1BP29016 333 aa15.74■□□□□ 0.11
SHKBP1-214ENST00000597396 PRSS3P35030 304 aa15.74■□□□□ 0.11
SHKBP1-214ENST00000597396 HABP2Q14520 560 aaPredicted RBP15.74■□□□□ 0.11
SHKBP1-214ENST00000597396 FAM71F2Q6NXP2 309 aa15.74■□□□□ 0.11
SHKBP1-214ENST00000597396 ZNF833PQ6ZTB9 187 aa15.74■□□□□ 0.11
SHKBP1-214ENST00000597396 HOGA1Q86XE5 327 aa15.74■□□□□ 0.11
SHKBP1-214ENST00000597396 RBM14Q96PK6 669 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-214ENST00000597396 MRPL20Q9BYC9 149 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-214ENST00000597396 EXTL2Q9UBQ6 330 aa15.74■□□□□ 0.11
SHKBP1-214ENST00000597396 RSL24D1Q9UHA3 163 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-214ENST00000597396 ANK2Q01484 3957 aa15.74■□□□□ 0.11
SHKBP1-214ENST00000597396 CLPSL1A2RUU4 121 aa15.73■□□□□ 0.11
SHKBP1-214ENST00000597396 GPR12P47775 334 aa15.73■□□□□ 0.11
SHKBP1-214ENST00000597396 HNF4GQ14541 408 aa15.73■□□□□ 0.11
SHKBP1-214ENST00000597396 FBLN7Q53RD9 439 aa15.73■□□□□ 0.11
SHKBP1-214ENST00000597396 RPL39P5Q59GN2 51 aa15.73■□□□□ 0.11
SHKBP1-214ENST00000597396 SNX29P2Q8IUI4 249 aa15.73■□□□□ 0.11
SHKBP1-214ENST00000597396 H1FOOQ8IZA3 346 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-214ENST00000597396 C3orf56Q8N813 242 aa15.73■□□□□ 0.11
SHKBP1-214ENST00000597396 OR2T10Q8NGZ9 312 aa15.73■□□□□ 0.11
SHKBP1-214ENST00000597396 AGMATQ9BSE5 352 aa15.73■□□□□ 0.11
SHKBP1-214ENST00000597396 C16orf95Q9H693 158 aa15.73■□□□□ 0.11
SHKBP1-214ENST00000597396 MMP24Q9Y5R2 645 aa15.73■□□□□ 0.11
SHKBP1-214ENST00000597396 HLA-DQB1P01920 261 aa15.72■□□□□ 0.11
SHKBP1-214ENST00000597396 OR8U9P0C7N5 309 aa15.72■□□□□ 0.11
SHKBP1-214ENST00000597396 LSAMPQ13449 338 aa15.72■□□□□ 0.11
SHKBP1-214ENST00000597396 ARSJQ5FYB0 599 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-214ENST00000597396 OR8U1Q8NH10 309 aa15.72■□□□□ 0.11
SHKBP1-214ENST00000597396 LINC01006Q8NI28 216 aa15.72■□□□□ 0.11
SHKBP1-214ENST00000597396 NABP2Q9BQ15 211 aa15.72■□□□□ 0.11
SHKBP1-214ENST00000597396 PRSS22Q9GZN4 317 aa15.72■□□□□ 0.11
SHKBP1-214ENST00000597396 RBM38Q9H0Z9 239 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-214ENST00000597396 OR2D2Q9H210 308 aa15.72■□□□□ 0.11
SHKBP1-214ENST00000597396 MOB4Q9Y3A3 225 aa15.72■□□□□ 0.11
SHKBP1-214ENST00000597396 RNF114Q9Y508 228 aa15.72■□□□□ 0.11
SHKBP1-214ENST00000597396 CTDSP2O14595 271 aa15.71■□□□□ 0.11
SHKBP1-214ENST00000597396 LAX1Q8IWV1 398 aa15.71■□□□□ 0.11
SHKBP1-214ENST00000597396 OR2T6Q8NHC8 308 aa15.71■□□□□ 0.11
SHKBP1-214ENST00000597396 EAF1Q96JC9 268 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-214ENST00000597396 ZNF251Q9BRH9 671 aa15.71■□□□□ 0.11
SHKBP1-214ENST00000597396 C6orf62Q9GZU0 229 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-214ENST00000597396 MIXL1Q9H2W2 232 aa15.71■□□□□ 0.11
SHKBP1-214ENST00000597396 ZNF736B4DX44 427 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-214ENST00000597396 M0QZK8 103 aa15.7■□□□□ 0.1
SHKBP1-214ENST00000597396 ZNF701M0R085 212 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-214ENST00000597396 MOSP00540 346 aa15.7■□□□□ 0.1
SHKBP1-214ENST00000597396 NFYAP23511 347 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-214ENST00000597396 EBI3Q14213 229 aa15.7■□□□□ 0.1
SHKBP1-214ENST00000597396 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-214ENST00000597396 DCUN1D5Q9BTE7 237 aa15.7■□□□□ 0.1
SHKBP1-214ENST00000597396 SCPEP1Q9HB40 452 aa15.7■□□□□ 0.1
SHKBP1-214ENST00000597396 NECAP2Q9NVZ3 263 aa15.7■□□□□ 0.1
SHKBP1-214ENST00000597396 J3QRK9 145 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms