RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 CT45A7P0DMV0 189 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 VSIG10L2P0DP72 767 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 PTHLHP12272 177 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 ZBTB25P24278 435 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 IL3RAP26951 378 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 CD1BP29016 333 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 F2RL1P55085 397 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 LSAMPQ13449 338 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 ARFRP1Q13795 201 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 HES1Q14469 280 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 PRR31Q5SQ13 230 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 C10orf99Q6UWK7 81 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 C5orf56Q8N8D9 126 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 OR2AK2Q8NG84 335 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 OR4A4PQ8NGN8 299 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 SGMS2Q8NHU3 365 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 SLC25A46Q96AG3 418 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 C5orf30Q96GV9 206 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 CABLES2Q9BTV7 478 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 TOLLIPQ9H0E2 274 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 MOB4Q9Y3A3 225 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 ETV7Q9Y603 341 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 TRBV6-7A0A0A0MS04 114 aa8.84□□□□□ -0.99
VRK3-210ENST00000596121 ITGB1BP1O14713 200 aa8.84□□□□□ -0.99
VRK3-210ENST00000596121 CD28P10747 220 aa8.84□□□□□ -0.99
VRK3-210ENST00000596121 SERPINB10P48595 397 aa8.84□□□□□ -0.99
VRK3-210ENST00000596121 SCAND1P57086 179 aa8.84□□□□□ -0.99
VRK3-210ENST00000596121 TCTEX1D4Q5JR98 221 aa8.84□□□□□ -0.99
VRK3-210ENST00000596121 GPR107Q5VW38 600 aa8.84□□□□□ -0.99
VRK3-210ENST00000596121 Q6ZS49 121 aa8.84□□□□□ -0.99
VRK3-210ENST00000596121 ANKRD13BQ86YJ7 626 aa8.84□□□□□ -0.99
VRK3-210ENST00000596121 Q8N9W7 124 aa8.84□□□□□ -0.99
VRK3-210ENST00000596121 OR2T10Q8NGZ9 312 aa8.84□□□□□ -0.99
VRK3-210ENST00000596121 ST6GALNAC5Q9BVH7 336 aa8.84□□□□□ -0.99
VRK3-210ENST00000596121 MRPS26Q9BYN8 205 aaKnown RBP8.84□□□□□ -0.99
VRK3-210ENST00000596121 RDH8Q9NYR8 311 aa8.84□□□□□ -0.99
VRK3-210ENST00000596121 MGAT4AQ9UM21 535 aa8.84□□□□□ -0.99
VRK3-210ENST00000596121 SPATA2Q9UM82 520 aa8.84□□□□□ -0.99
VRK3-210ENST00000596121 BET1O15155 118 aa8.83□□□□□ -1
VRK3-210ENST00000596121 HSPA12AO43301 675 aa8.83□□□□□ -1
VRK3-210ENST00000596121 GABARAPO95166 117 aa8.83□□□□□ -1
VRK3-210ENST00000596121 MOSP00540 346 aa8.83□□□□□ -1
VRK3-210ENST00000596121 GSTP1P09211 210 aaKnown RBP8.83□□□□□ -1
VRK3-210ENST00000596121 DTYMKP23919 212 aa8.83□□□□□ -1
VRK3-210ENST00000596121 CNTFRP26992 372 aa8.83□□□□□ -1
VRK3-210ENST00000596121 VDAC2P45880 294 aaPredicted RBP8.83□□□□□ -1
VRK3-210ENST00000596121 MRPS15P82914 257 aaKnown RBP8.83□□□□□ -1
VRK3-210ENST00000596121 SRSF7Q16629 238 aaKnown RBP eCLIP8.83□□□□□ -1
VRK3-210ENST00000596121 C9orf152Q5JTZ5 239 aa8.83□□□□□ -1
VRK3-210ENST00000596121 GLDNQ6ZMI3 551 aaPredicted RBP8.83□□□□□ -1
VRK3-210ENST00000596121 AKR1E2Q96JD6 320 aa8.83□□□□□ -1
VRK3-210ENST00000596121 ABCG5Q9H222 651 aa8.83□□□□□ -1
VRK3-210ENST00000596121 AUNIPQ9H7T9 357 aa8.83□□□□□ -1
VRK3-210ENST00000596121 NCBP2LA6PVI3 153 aaKnown RBP8.82□□□□□ -1
VRK3-210ENST00000596121 ADARB2-AS1A8MUL3 147 aa8.82□□□□□ -1
VRK3-210ENST00000596121 M0QZK8 103 aa8.82□□□□□ -1
VRK3-210ENST00000596121 RAB29O14966 203 aa8.82□□□□□ -1
VRK3-210ENST00000596121 FGF16O43320 207 aa8.82□□□□□ -1
VRK3-210ENST00000596121 TXNL1O43396 289 aa8.82□□□□□ -1
VRK3-210ENST00000596121 TMEM127O75204 238 aa8.82□□□□□ -1
VRK3-210ENST00000596121 TSPAN15O95858 294 aa8.82□□□□□ -1
VRK3-210ENST00000596121 TALDO1P37837 337 aa8.82□□□□□ -1
VRK3-210ENST00000596121 KIR2DS1Q14954 304 aa8.82□□□□□ -1
VRK3-210ENST00000596121 PNLIPRP3Q17RR3 467 aa8.82□□□□□ -1
VRK3-210ENST00000596121 CROCCP3Q8IVE0 287 aa8.82□□□□□ -1
VRK3-210ENST00000596121 H1FOOQ8IZA3 346 aaPredicted RBP8.82□□□□□ -1
VRK3-210ENST00000596121 GVQW1Q8N7I0 195 aa8.82□□□□□ -1
VRK3-210ENST00000596121 SAMD12Q8N8I0 201 aa8.82□□□□□ -1
VRK3-210ENST00000596121 ZNF383Q8NA42 475 aa8.82□□□□□ -1
VRK3-210ENST00000596121 DRAXINQ8NBI3 349 aaPredicted RBP8.82□□□□□ -1
VRK3-210ENST00000596121 NOL4LQ96MY1 436 aaPredicted RBP8.82□□□□□ -1
VRK3-210ENST00000596121 S1PR3Q99500 378 aa8.82□□□□□ -1
VRK3-210ENST00000596121 H0YJW9 148 aa8.81□□□□□ -1
VRK3-210ENST00000596121 SCGNO76038 276 aa8.81□□□□□ -1
VRK3-210ENST00000596121 EIF4EP06730 217 aaKnown RBP8.81□□□□□ -1
VRK3-210ENST00000596121 FCER2P06734 321 aa8.81□□□□□ -1
VRK3-210ENST00000596121 OR8U9P0C7N5 309 aa8.81□□□□□ -1
VRK3-210ENST00000596121 GNG2P59768 71 aa8.81□□□□□ -1
VRK3-210ENST00000596121 SPCS2Q15005 226 aa8.81□□□□□ -1
VRK3-210ENST00000596121 ARL6IP1Q15041 203 aa8.81□□□□□ -1
VRK3-210ENST00000596121 UBE2NLQ5JXB2 153 aa8.81□□□□□ -1
VRK3-210ENST00000596121 FAM71F2Q6NXP2 309 aa8.81□□□□□ -1
VRK3-210ENST00000596121 FAM131AQ6UXB0 335 aa8.81□□□□□ -1
VRK3-210ENST00000596121 FAM71E2Q8N5Q1 922 aa8.81□□□□□ -1
VRK3-210ENST00000596121 OR5AU1Q8NGC0 362 aa8.81□□□□□ -1
VRK3-210ENST00000596121 OR8U1Q8NH10 309 aa8.81□□□□□ -1
VRK3-210ENST00000596121 OR10J5Q8NHC4 309 aa8.81□□□□□ -1
VRK3-210ENST00000596121 CITED2Q99967 270 aaPredicted RBP8.81□□□□□ -1
VRK3-210ENST00000596121 HSPB9Q9BQS6 159 aa8.81□□□□□ -1
VRK3-210ENST00000596121 DCSTAMPQ9H295 470 aa8.81□□□□□ -1
VRK3-210ENST00000596121 SDHAF2Q9NX18 166 aa8.81□□□□□ -1
VRK3-210ENST00000596121 PIPOXQ9P0Z9 390 aa8.81□□□□□ -1
VRK3-210ENST00000596121 COMMD3Q9UBI1 195 aa8.81□□□□□ -1
VRK3-210ENST00000596121 LINC00527Q9UJ94 153 aa8.81□□□□□ -1
VRK3-210ENST00000596121 A0A0A6YYH2 397 aa8.8□□□□□ -1
VRK3-210ENST00000596121 IGKV1D-13A0A0B4J2D9 117 aa8.8□□□□□ -1
VRK3-210ENST00000596121 MEIS3P1A6NDR6 274 aa8.8□□□□□ -1
VRK3-210ENST00000596121 A6NJ64 397 aa8.8□□□□□ -1
VRK3-210ENST00000596121 J3QRK9 145 aa8.8□□□□□ -1
VRK3-210ENST00000596121 XRCC3O43542 346 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms