RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 PHLDA2Q53GA4 152 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 Q5PR19 223 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 SLC25A48Q6ZT89 311 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 LINC00311Q8N616 119 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 DRAM1Q8N682 238 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 ZBTB34Q8NCN2 500 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 OR2AK2Q8NG84 335 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 OR52B4Q8NGK2 314 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 ZNF431Q8TF32 576 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 ABHD14AQ9BUJ0 271 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 SUCNR1Q9BXA5 334 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 OR2D2Q9H210 308 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 PSG11Q9UQ72 335 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 ABCA1O95477 2261 aa12.06□□□□□ -0.48
SHKBP1-211ENST00000595945 FLNAP21333 2647 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-211ENST00000595945 ZANQ9Y493 2812 aa12.05□□□□□ -0.48
SHKBP1-211ENST00000595945 PGLYRP1O75594 196 aaPredicted RBP12.05□□□□□ -0.48
SHKBP1-211ENST00000595945 C4orf46Q504U0 113 aa12.05□□□□□ -0.48
SHKBP1-211ENST00000595945 CCDC71LQ8N9Z2 235 aa12.05□□□□□ -0.48
SHKBP1-211ENST00000595945 RTN4IP1Q8WWV3 396 aaPredicted RBP12.05□□□□□ -0.48
SHKBP1-211ENST00000595945 SIRPDQ9H106 197 aa12.05□□□□□ -0.48
SHKBP1-211ENST00000595945 TMEM133Q9H2Q1 129 aa12.05□□□□□ -0.48
SHKBP1-211ENST00000595945 NAA60Q9H7X0 242 aa12.05□□□□□ -0.48
SHKBP1-211ENST00000595945 UNKLQ9H9P5 680 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-211ENST00000595945 ONECUT1Q9UBC0 465 aa12.05□□□□□ -0.48
SHKBP1-211ENST00000595945 RNF150Q9ULK6 438 aa12.05□□□□□ -0.48
SHKBP1-211ENST00000595945 RBM7Q9Y580 266 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-211ENST00000595945 CSPG4Q6UVK1 2322 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 FLNBO75369 2602 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 A0A0B4J2A0 478 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 HMX3A6NHT5 357 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 MPPED1O15442 326 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 CREBL2O60519 120 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 PROP1O75360 226 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 DUS4LO95620 317 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 IGHV3-7P01780 117 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 HLA-AP01891 365 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 TRAPPC2P0DI81 140 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 TRAPPC2BP0DI82 140 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 ARF6P62330 175 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 LOXL1Q08397 574 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 KCTD9Q7L273 389 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 SGPP2Q8IWX5 399 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 ODF3L1Q8IXM7 274 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 MITD1Q8WV92 249 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 TNFRSF14Q92956 283 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 GALNT14Q96FL9 552 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 ABHD14BQ96IU4 210 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 ZNF251Q9BRH9 671 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 MMP26Q9NRE1 261 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 SHPKQ9UHJ6 478 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 KCNS2Q9ULS6 477 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 KPTNQ9Y664 436 aa12.04□□□□□ -0.48
SHKBP1-211ENST00000595945 TEX13DA0A0J9YY54 714 aaPredicted RBP12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 hCG_1809904A0A1W2PP81 198 aa12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 A0A1W2PPE2 198 aa12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 A0A1W2PPE3 182 aa12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 A0A1W2PR64 198 aa12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 A0A1W2PRV1 198 aa12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 J3QR06 171 aa12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 PRTN3P24158 256 aa12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 RRAS2P62070 204 aaPredicted RBP12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 CBX3Q13185 183 aa12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 C1orf229Q6ZS94 237 aaPredicted RBP12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 TBC1D26Q86UD7 250 aa12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 CMTM1Q8IZ96 169 aa12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 C12orf45Q8N5I9 185 aaPredicted RBP12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 OR9G1Q8NH87 305 aa12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 METTL8Q9H825 291 aaKnown RBP12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 SDHAF2Q9NX18 166 aa12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 INSIG2Q9Y5U4 225 aa12.03□□□□□ -0.48
SHKBP1-211ENST00000595945 IGHV2-26A0A0B4J1V2 119 aa12.02□□□□□ -0.49
SHKBP1-211ENST00000595945 IGLV1-47P01700 117 aa12.02□□□□□ -0.49
SHKBP1-211ENST00000595945 MMP9P14780 707 aa12.02□□□□□ -0.49
SHKBP1-211ENST00000595945 VAMP1P23763 118 aa12.02□□□□□ -0.49
SHKBP1-211ENST00000595945 F2RP25116 425 aa12.02□□□□□ -0.49
SHKBP1-211ENST00000595945 GPR12P47775 334 aa12.02□□□□□ -0.49
SHKBP1-211ENST00000595945 GNG10P50151 68 aa12.02□□□□□ -0.49
SHKBP1-211ENST00000595945 DVL1P1P54792 670 aaPredicted RBP12.02□□□□□ -0.49
SHKBP1-211ENST00000595945 TMEM187Q14656 261 aa12.02□□□□□ -0.49
SHKBP1-211ENST00000595945 FCN2Q15485 313 aa12.02□□□□□ -0.49
SHKBP1-211ENST00000595945 SLC9A3R2Q15599 337 aa12.02□□□□□ -0.49
SHKBP1-211ENST00000595945 ANKRD55Q3KP44 614 aa12.02□□□□□ -0.49
SHKBP1-211ENST00000595945 HCP5Q6MZN7 132 aa12.02□□□□□ -0.49
SHKBP1-211ENST00000595945 ABHD12Q8N2K0 398 aa12.02□□□□□ -0.49
SHKBP1-211ENST00000595945 GPHA2Q96T91 129 aa12.02□□□□□ -0.49
SHKBP1-211ENST00000595945 REG4Q9BYZ8 158 aa12.02□□□□□ -0.49
SHKBP1-211ENST00000595945 MED28Q9H204 178 aa12.02□□□□□ -0.49
SHKBP1-211ENST00000595945 TLN2Q9Y4G6 2542 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 BAHCC1Q9P281 2608 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 SAA2-SAA4A0A096LPE2 208 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 C3orf85A0A1B0GTC6 90 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 RAB29O14966 203 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 TNFSF12O43508 249 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 IFNA2P01563 188 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 OR5AC1P0C628 307 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 SAA2P0DJI9 122 aaPredicted RBP12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 SULT1A3P0DMM9 295 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 SULT1A4P0DMN0 295 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms