RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 OR5H14A6NHG9 310 aa17.52■□□□□ 0.4
SSBP4-203ENST00000593641 RRHO14718 337 aa17.52■□□□□ 0.4
SSBP4-203ENST00000593641 GP9P14770 177 aa17.52■□□□□ 0.4
SSBP4-203ENST00000593641 CRIP2P52943 208 aaPredicted RBP17.52■□□□□ 0.4
SSBP4-203ENST00000593641 WNT4P56705 351 aa17.52■□□□□ 0.4
SSBP4-203ENST00000593641 CX3CL1P78423 397 aa17.52■□□□□ 0.4
SSBP4-203ENST00000593641 TMEM267Q0VDI3 215 aaPredicted RBP17.52■□□□□ 0.4
SSBP4-203ENST00000593641 LRRC36Q1X8D7 754 aa17.52■□□□□ 0.4
SSBP4-203ENST00000593641 PYHIN1Q6K0P9 492 aa17.52■□□□□ 0.4
SSBP4-203ENST00000593641 OVCH2Q7RTZ1 564 aa17.52■□□□□ 0.4
SSBP4-203ENST00000593641 TMEM59Q9BXS4 323 aa17.52■□□□□ 0.4
SSBP4-203ENST00000593641 FBXL15Q9H469 300 aa17.52■□□□□ 0.4
SSBP4-203ENST00000593641 CHMP1AQ9HD42 196 aaPredicted RBP17.52■□□□□ 0.4
SSBP4-203ENST00000593641 CNOT2Q9NZN8 540 aaKnown RBP17.52■□□□□ 0.4
SSBP4-203ENST00000593641 RNF150Q9ULK6 438 aa17.52■□□□□ 0.4
SSBP4-203ENST00000593641 SOX15O60248 233 aa17.51■□□□□ 0.39
SSBP4-203ENST00000593641 GSTP1P09211 210 aaKnown RBP17.51■□□□□ 0.39
SSBP4-203ENST00000593641 OR8U9P0C7N5 309 aa17.51■□□□□ 0.39
SSBP4-203ENST00000593641 C19orf54Q5BKX5 351 aa17.51■□□□□ 0.39
SSBP4-203ENST00000593641 CASC10Q5T4H9 136 aa17.51■□□□□ 0.39
SSBP4-203ENST00000593641 C6orf201Q7Z4U5 140 aa17.51■□□□□ 0.39
SSBP4-203ENST00000593641 DHRSXQ8N5I4 330 aa17.51■□□□□ 0.39
SSBP4-203ENST00000593641 CASTOR1Q8WTX7 329 aa17.51■□□□□ 0.39
SSBP4-203ENST00000593641 FAAP24Q9BTP7 215 aa17.51■□□□□ 0.39
SSBP4-203ENST00000593641 ZMAT4Q9H898 229 aa17.51■□□□□ 0.39
SSBP4-203ENST00000593641 SLC23A1Q9UHI7 598 aa17.51■□□□□ 0.39
SSBP4-203ENST00000593641 RYR2Q92736 4967 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 IGHV4OR15-8A0A075B7B6 117 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 A0A087WW49 117 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 H7C2Y5 167 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 FRMD6-AS1P0C7T7 363 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 CD40LGP29965 261 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 MC5RP33032 325 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 PITPNAQ00169 270 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 RPL39P5Q59GN2 51 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 GLT8D1Q68CQ7 371 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 OR10K2Q6IF99 312 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 ACSM6Q6P461 480 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 AHSA2Q719I0 299 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 SVOPQ8N4V2 548 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 SETD6Q8TBK2 473 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 ARPC1AQ92747 370 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 C8orf4Q9NR00 106 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 WASHC3Q9Y3C0 194 aa17.5■□□□□ 0.39
SSBP4-203ENST00000593641 RBBP9O75884 186 aa17.49■□□□□ 0.39
SSBP4-203ENST00000593641 CT45A6P0DMU7 189 aa17.49■□□□□ 0.39
SSBP4-203ENST00000593641 CT45A5P0DMU8 189 aa17.49■□□□□ 0.39
SSBP4-203ENST00000593641 CT45A7P0DMV0 189 aa17.49■□□□□ 0.39
SSBP4-203ENST00000593641 RPS27AP62979 156 aaKnown RBP17.49■□□□□ 0.39
SSBP4-203ENST00000593641 ACTBL2Q562R1 376 aa17.49■□□□□ 0.39
SSBP4-203ENST00000593641 GLDNQ6ZMI3 551 aaPredicted RBP17.49■□□□□ 0.39
SSBP4-203ENST00000593641 MOB1BQ7L9L4 216 aa17.49■□□□□ 0.39
SSBP4-203ENST00000593641 FLYWCH2Q96CP2 140 aaKnown RBP17.49■□□□□ 0.39
SSBP4-203ENST00000593641 OR4C12Q96R67 309 aa17.49■□□□□ 0.39
SSBP4-203ENST00000593641 H0YJW9 148 aa17.48■□□□□ 0.39
SSBP4-203ENST00000593641 RBM48Q5RL73 367 aaKnown RBP17.48■□□□□ 0.39
SSBP4-203ENST00000593641 CD200R1LQ6Q8B3 271 aa17.48■□□□□ 0.39
SSBP4-203ENST00000593641 UNQ5815/PRO19632Q6UWF5 114 aa17.48■□□□□ 0.39
SSBP4-203ENST00000593641 PPP1R27Q86WC6 154 aa17.48■□□□□ 0.39
SSBP4-203ENST00000593641 C8orf59Q8N0T1 100 aaPredicted RBP17.48■□□□□ 0.39
SSBP4-203ENST00000593641 PACRGLQ8N7B6 248 aa17.48■□□□□ 0.39
SSBP4-203ENST00000593641 KCNG3Q8TAE7 436 aa17.48■□□□□ 0.39
SSBP4-203ENST00000593641 TPSG1Q9NRR2 321 aa17.48■□□□□ 0.39
SSBP4-203ENST00000593641 PSORS1C1Q9UIG5 152 aa17.48■□□□□ 0.39
SSBP4-203ENST00000593641 NUBP2Q9Y5Y2 271 aa17.48■□□□□ 0.39
SSBP4-203ENST00000593641 SACSQ9NZJ4 4579 aa17.48■□□□□ 0.39
SSBP4-203ENST00000593641 NAPSAO96009 420 aa17.47■□□□□ 0.39
SSBP4-203ENST00000593641 IGHV3-11P01762 117 aa17.47■□□□□ 0.39
SSBP4-203ENST00000593641 HSPB1P04792 205 aaKnown RBP17.47■□□□□ 0.39
SSBP4-203ENST00000593641 TPPP2P59282 170 aa17.47■□□□□ 0.39
SSBP4-203ENST00000593641 ACSM3Q53FZ2 586 aa17.47■□□□□ 0.39
SSBP4-203ENST00000593641 AKIRIN2Q53H80 203 aa17.47■□□□□ 0.39
SSBP4-203ENST00000593641 ABHD14BQ96IU4 210 aa17.47■□□□□ 0.39
SSBP4-203ENST00000593641 RNF5Q99942 180 aa17.47■□□□□ 0.39
SSBP4-203ENST00000593641 NICN1Q9BSH3 213 aa17.47■□□□□ 0.39
SSBP4-203ENST00000593641 FAM103A1Q9BTL3 118 aaKnown RBP17.47■□□□□ 0.39
SSBP4-203ENST00000593641 TM2D1Q9BX74 207 aa17.47■□□□□ 0.39
SSBP4-203ENST00000593641 PALMDQ9NP74 551 aa17.47■□□□□ 0.39
SSBP4-203ENST00000593641 PLEKHJ1Q9NW61 149 aa17.47■□□□□ 0.39
SSBP4-203ENST00000593641 TRIM64CA6NLI5 447 aa17.46■□□□□ 0.39
SSBP4-203ENST00000593641 FCN1O00602 326 aa17.46■□□□□ 0.39
SSBP4-203ENST00000593641 HTR2CP28335 458 aa17.46■□□□□ 0.39
SSBP4-203ENST00000593641 SRSF7Q16629 238 aaKnown RBP eCLIP17.46■□□□□ 0.39
SSBP4-203ENST00000593641 ZNF880Q6PDB4 577 aa17.46■□□□□ 0.39
SSBP4-203ENST00000593641 MS4A15Q8N5U1 240 aa17.46■□□□□ 0.39
SSBP4-203ENST00000593641 NANOGP1Q8N7R0 232 aa17.46■□□□□ 0.39
SSBP4-203ENST00000593641 OR5AN1Q8NGI8 311 aa17.46■□□□□ 0.39
SSBP4-203ENST00000593641 EDARADDQ8WWZ3 215 aa17.46■□□□□ 0.39
SSBP4-203ENST00000593641 MS4A10Q96PG2 267 aa17.46■□□□□ 0.39
SSBP4-203ENST00000593641 CLCC1Q96S66 551 aa17.46■□□□□ 0.39
SSBP4-203ENST00000593641 RIMS4Q9H426 269 aaPredicted RBP17.46■□□□□ 0.39
SSBP4-203ENST00000593641 SLA2Q9H6Q3 261 aa17.46■□□□□ 0.39
SSBP4-203ENST00000593641 METTL1Q9UBP6 276 aaKnown RBP17.46■□□□□ 0.39
SSBP4-203ENST00000593641 TENM2Q9NT68 2774 aa17.45■□□□□ 0.38
SSBP4-203ENST00000593641 ITGB1BP1O14713 200 aa17.45■□□□□ 0.38
SSBP4-203ENST00000593641 ARPC1BO15143 372 aaKnown RBP17.45■□□□□ 0.38
SSBP4-203ENST00000593641 HSPA12AO43301 675 aa17.45■□□□□ 0.38
SSBP4-203ENST00000593641 TFAP2AP05549 437 aa17.45■□□□□ 0.38
SSBP4-203ENST00000593641 EGR2P11161 476 aaPredicted RBP17.45■□□□□ 0.38
SSBP4-203ENST00000593641 LYL1P12980 280 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms