RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 RAB29O14966 203 aa18.5■□□□□ 0.55
LSM4-202ENST00000593564 ST8SIA5O15466 376 aa18.5■□□□□ 0.55
LSM4-202ENST00000593564 NAPSAO96009 420 aa18.5■□□□□ 0.55
LSM4-202ENST00000593564 CHRNA7P36544 502 aa18.5■□□□□ 0.55
LSM4-202ENST00000593564 CX3CL1P78423 397 aa18.5■□□□□ 0.55
LSM4-202ENST00000593564 C8orf59Q8N0T1 100 aaPredicted RBP18.5■□□□□ 0.55
LSM4-202ENST00000593564 SVOPQ8N4V2 548 aa18.5■□□□□ 0.55
LSM4-202ENST00000593564 NANOGP1Q8N7R0 232 aa18.5■□□□□ 0.55
LSM4-202ENST00000593564 DLX4Q92988 240 aaPredicted RBP18.5■□□□□ 0.55
LSM4-202ENST00000593564 TMEM59Q9BXS4 323 aa18.5■□□□□ 0.55
LSM4-202ENST00000593564 PLCXD1Q9NUJ7 323 aa18.5■□□□□ 0.55
LSM4-202ENST00000593564 SLC23A1Q9UHI7 598 aa18.5■□□□□ 0.55
LSM4-202ENST00000593564 OR5H14A6NHG9 310 aa18.49■□□□□ 0.55
LSM4-202ENST00000593564 LINC01619G3V211 115 aa18.49■□□□□ 0.55
LSM4-202ENST00000593564 SAP30O75446 220 aa18.49■□□□□ 0.55
LSM4-202ENST00000593564 LGALS1P09382 135 aaKnown RBP18.49■□□□□ 0.55
LSM4-202ENST00000593564 GNAO1P09471 354 aa18.49■□□□□ 0.55
LSM4-202ENST00000593564 CT45A6P0DMU7 189 aa18.49■□□□□ 0.55
LSM4-202ENST00000593564 CT45A5P0DMU8 189 aa18.49■□□□□ 0.55
LSM4-202ENST00000593564 CT45A7P0DMV0 189 aa18.49■□□□□ 0.55
LSM4-202ENST00000593564 GABPB1Q06547 395 aaPredicted RBP18.49■□□□□ 0.55
LSM4-202ENST00000593564 INSL4Q14641 139 aa18.49■□□□□ 0.55
LSM4-202ENST00000593564 ACSM3Q53FZ2 586 aa18.49■□□□□ 0.55
LSM4-202ENST00000593564 C1orf100Q5SVJ3 147 aa18.49■□□□□ 0.55
LSM4-202ENST00000593564 GLT8D1Q68CQ7 371 aa18.49■□□□□ 0.55
LSM4-202ENST00000593564 ZNF880Q6PDB4 577 aa18.49■□□□□ 0.55
LSM4-202ENST00000593564 LRRTM1Q86UE6 522 aa18.49■□□□□ 0.55
LSM4-202ENST00000593564 FBLIM1Q8WUP2 373 aa18.49■□□□□ 0.55
LSM4-202ENST00000593564 TM2D1Q9BX74 207 aa18.49■□□□□ 0.55
LSM4-202ENST00000593564 FBXL15Q9H469 300 aa18.49■□□□□ 0.55
LSM4-202ENST00000593564 TPSG1Q9NRR2 321 aa18.49■□□□□ 0.55
LSM4-202ENST00000593564 H0YJW9 148 aa18.48■□□□□ 0.55
LSM4-202ENST00000593564 HTR2CP28335 458 aa18.48■□□□□ 0.55
LSM4-202ENST00000593564 SLURP1P55000 103 aa18.48■□□□□ 0.55
LSM4-202ENST00000593564 RPL39P5Q59GN2 51 aa18.48■□□□□ 0.55
LSM4-202ENST00000593564 MOB1BQ7L9L4 216 aa18.48■□□□□ 0.55
LSM4-202ENST00000593564 SBSPONQ8IVN8 264 aa18.48■□□□□ 0.55
LSM4-202ENST00000593564 MS4A15Q8N5U1 240 aa18.48■□□□□ 0.55
LSM4-202ENST00000593564 KCNG3Q8TAE7 436 aa18.48■□□□□ 0.55
LSM4-202ENST00000593564 PHYHIPQ92561 330 aa18.48■□□□□ 0.55
LSM4-202ENST00000593564 NUBP2Q9Y5Y2 271 aa18.48■□□□□ 0.55
LSM4-202ENST00000593564 EBAG9O00559 213 aa18.47■□□□□ 0.55
LSM4-202ENST00000593564 ITGB1BP1O14713 200 aa18.47■□□□□ 0.55
LSM4-202ENST00000593564 RBBP9O75884 186 aa18.47■□□□□ 0.55
LSM4-202ENST00000593564 EGR2P11161 476 aaPredicted RBP18.47■□□□□ 0.55
LSM4-202ENST00000593564 SPNP16150 400 aa18.47■□□□□ 0.55
LSM4-202ENST00000593564 MC5RP33032 325 aa18.47■□□□□ 0.55
LSM4-202ENST00000593564 TMEM267Q0VDI3 215 aaPredicted RBP18.47■□□□□ 0.55
LSM4-202ENST00000593564 UNC119Q13432 240 aa18.47■□□□□ 0.55
LSM4-202ENST00000593564 PLGLAQ15195 96 aa18.47■□□□□ 0.55
LSM4-202ENST00000593564 PYHIN1Q6K0P9 492 aa18.47■□□□□ 0.55
LSM4-202ENST00000593564 CD200R1LQ6Q8B3 271 aa18.47■□□□□ 0.55
LSM4-202ENST00000593564 CASTOR1Q8WTX7 329 aa18.47■□□□□ 0.55
LSM4-202ENST00000593564 RCHY1Q96PM5 261 aa18.47■□□□□ 0.55
LSM4-202ENST00000593564 NICN1Q9BSH3 213 aa18.47■□□□□ 0.55
LSM4-202ENST00000593564 GHITMQ9H3K2 345 aa18.47■□□□□ 0.55
LSM4-202ENST00000593564 CHMP1AQ9HD42 196 aaPredicted RBP18.47■□□□□ 0.55
LSM4-202ENST00000593564 FKBP14Q9NWM8 211 aa18.47■□□□□ 0.55
LSM4-202ENST00000593564 WASHC3Q9Y3C0 194 aa18.47■□□□□ 0.55
LSM4-202ENST00000593564 A3GALT2U3KPV4 340 aa18.47■□□□□ 0.55
LSM4-202ENST00000593564 SACSQ9NZJ4 4579 aa18.47■□□□□ 0.55
LSM4-202ENST00000593564 IGHV4OR15-8A0A075B7B6 117 aa18.46■□□□□ 0.55
LSM4-202ENST00000593564 A0A087WW49 117 aa18.46■□□□□ 0.55
LSM4-202ENST00000593564 FCN1O00602 326 aa18.46■□□□□ 0.55
LSM4-202ENST00000593564 GP9P14770 177 aa18.46■□□□□ 0.55
LSM4-202ENST00000593564 RBM48Q5RL73 367 aaKnown RBP18.46■□□□□ 0.55
LSM4-202ENST00000593564 ACSM6Q6P461 480 aa18.46■□□□□ 0.55
LSM4-202ENST00000593564 GLDNQ6ZMI3 551 aaPredicted RBP18.46■□□□□ 0.55
LSM4-202ENST00000593564 BPIFB6Q8NFQ5 453 aa18.46■□□□□ 0.55
LSM4-202ENST00000593564 OR5AN1Q8NGI8 311 aa18.46■□□□□ 0.55
LSM4-202ENST00000593564 OR6Q1Q8NGQ2 317 aa18.46■□□□□ 0.55
LSM4-202ENST00000593564 MUC7Q8TAX7 377 aa18.46■□□□□ 0.55
LSM4-202ENST00000593564 RNF5Q99942 180 aa18.46■□□□□ 0.55
LSM4-202ENST00000593564 AGMATQ9BSE5 352 aa18.46■□□□□ 0.55
LSM4-202ENST00000593564 PARP12Q9H0J9 701 aaKnown RBP18.46■□□□□ 0.55
LSM4-202ENST00000593564 RIMS4Q9H426 269 aaPredicted RBP18.46■□□□□ 0.55
LSM4-202ENST00000593564 RNF150Q9ULK6 438 aa18.46■□□□□ 0.55
LSM4-202ENST00000593564 TRBV6-6A0A0A6YYG2 114 aa18.45■□□□□ 0.54
LSM4-202ENST00000593564 TMEM14DPA8MWL7 114 aa18.45■□□□□ 0.54
LSM4-202ENST00000593564 GSTP1P09211 210 aaKnown RBP18.45■□□□□ 0.54
LSM4-202ENST00000593564 CD37P11049 281 aa18.45■□□□□ 0.54
LSM4-202ENST00000593564 QRFPP83859 136 aa18.45■□□□□ 0.54
LSM4-202ENST00000593564 SETD6Q8TBK2 473 aa18.45■□□□□ 0.54
LSM4-202ENST00000593564 ABHD5Q8WTS1 349 aa18.45■□□□□ 0.54
LSM4-202ENST00000593564 ARPC1AQ92747 370 aa18.45■□□□□ 0.54
LSM4-202ENST00000593564 ABHD14BQ96IU4 210 aa18.45■□□□□ 0.54
LSM4-202ENST00000593564 KCNK15Q9H427 330 aa18.45■□□□□ 0.54
LSM4-202ENST00000593564 H7C2Y5 167 aa18.44■□□□□ 0.54
LSM4-202ENST00000593564 SLC22A1O15245 554 aa18.44■□□□□ 0.54
LSM4-202ENST00000593564 OR8U9P0C7N5 309 aa18.44■□□□□ 0.54
LSM4-202ENST00000593564 FRMD6-AS1P0C7T7 363 aa18.44■□□□□ 0.54
LSM4-202ENST00000593564 AKIRIN2Q53H80 203 aa18.44■□□□□ 0.54
LSM4-202ENST00000593564 ACTBL2Q562R1 376 aa18.44■□□□□ 0.54
LSM4-202ENST00000593564 RNLSQ5VYX0 342 aa18.44■□□□□ 0.54
LSM4-202ENST00000593564 OVCH2Q7RTZ1 564 aa18.44■□□□□ 0.54
LSM4-202ENST00000593564 PPP1R27Q86WC6 154 aa18.44■□□□□ 0.54
LSM4-202ENST00000593564 TMED9Q9BVK6 235 aa18.44■□□□□ 0.54
LSM4-202ENST00000593564 MND1Q9BWT6 205 aa18.44■□□□□ 0.54
LSM4-202ENST00000593564 PLEKHJ1Q9NW61 149 aa18.44■□□□□ 0.54
LSM4-202ENST00000593564 GAB2Q9UQC2 676 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms