RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 FAM157AC9JC47 383 aa16.44■□□□□ 0.22
CLIP3-206ENST00000593074 TSPAN4O14817 238 aa16.44■□□□□ 0.22
CLIP3-206ENST00000593074 AGPAT2O15120 278 aa16.44■□□□□ 0.22
CLIP3-206ENST00000593074 TXNL1O43396 289 aa16.44■□□□□ 0.22
CLIP3-206ENST00000593074 TSPAN15O95858 294 aa16.44■□□□□ 0.22
CLIP3-206ENST00000593074 CD40P25942 277 aa16.44■□□□□ 0.22
CLIP3-206ENST00000593074 FHITP49789 147 aa16.44■□□□□ 0.22
CLIP3-206ENST00000593074 DVL1P1P54792 670 aaPredicted RBP16.44■□□□□ 0.22
CLIP3-206ENST00000593074 RPL23AP62750 156 aaKnown RBP16.44■□□□□ 0.22
CLIP3-206ENST00000593074 HTD2P86397 168 aa16.44■□□□□ 0.22
CLIP3-206ENST00000593074 RBPJQ06330 500 aa16.44■□□□□ 0.22
CLIP3-206ENST00000593074 ZNF616Q08AN1 781 aa16.44■□□□□ 0.22
CLIP3-206ENST00000593074 STX12Q86Y82 276 aa16.44■□□□□ 0.22
CLIP3-206ENST00000593074 ESRP2Q9H6T0 727 aaKnown RBP16.44■□□□□ 0.22
CLIP3-206ENST00000593074 COA4Q9NYJ1 87 aa16.44■□□□□ 0.22
CLIP3-206ENST00000593074 RNF150Q9ULK6 438 aa16.44■□□□□ 0.22
CLIP3-206ENST00000593074 RAXQ9Y2V3 346 aa16.44■□□□□ 0.22
CLIP3-206ENST00000593074 SYNGR2O43760 224 aa16.43■□□□□ 0.22
CLIP3-206ENST00000593074 C1QL1O75973 258 aa16.43■□□□□ 0.22
CLIP3-206ENST00000593074 LHBP01229 141 aa16.43■□□□□ 0.22
CLIP3-206ENST00000593074 SNCAP37840 140 aa16.43■□□□□ 0.22
CLIP3-206ENST00000593074 GATA4P43694 442 aa16.43■□□□□ 0.22
CLIP3-206ENST00000593074 SELENOVP59797 346 aa16.43■□□□□ 0.22
CLIP3-206ENST00000593074 TMEM182Q6ZP80 229 aaPredicted RBP16.43■□□□□ 0.22
CLIP3-206ENST00000593074 MOGAT3Q86VF5 341 aa16.43■□□□□ 0.22
CLIP3-206ENST00000593074 TMEM217Q8N7C4 229 aa16.43■□□□□ 0.22
CLIP3-206ENST00000593074 ATP5SQ99766 215 aa16.43■□□□□ 0.22
CLIP3-206ENST00000593074 MMP24Q9Y5R2 645 aa16.43■□□□□ 0.22
CLIP3-206ENST00000593074 SPINT2O43291 252 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 SULT1A1P50225 295 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 RPL30P62888 115 aaKnown RBP16.42■□□□□ 0.22
CLIP3-206ENST00000593074 CATR1Q13166 79 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 FGFRL1Q8N441 504 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 SNX22Q96L94 193 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 FAM74A7A6NL05 159 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 UMAD1C9J7I0 102 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 MGST3O14880 152 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 NUPL2O15504 423 aaKnown RBP16.42■□□□□ 0.22
CLIP3-206ENST00000593074 PRH1P02810 166 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 ADH4P08319 380 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 SFTA3P0C7M3 94 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 P0C879 139 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 CD80P33681 288 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 EDDM3AQ14507 147 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 CR1LQ2VPA4 569 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 FAM74A3Q4VXF1 159 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 ITLN1Q8WWA0 313 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 MRPL37Q9BZE1 423 aaKnown RBP16.42■□□□□ 0.22
CLIP3-206ENST00000593074 CEP295Q9C0D2 2601 aa16.42■□□□□ 0.22
CLIP3-206ENST00000593074 MAP1BP46821 2468 aaKnown RBP16.41■□□□□ 0.22
CLIP3-206ENST00000593074 ODAMA1E959 279 aa16.41■□□□□ 0.22
CLIP3-206ENST00000593074 FAM90A26D6RGX4 464 aa16.41■□□□□ 0.22
CLIP3-206ENST00000593074 SPRY3O43610 288 aa16.41■□□□□ 0.22
CLIP3-206ENST00000593074 RAMP3O60896 148 aa16.41■□□□□ 0.22
CLIP3-206ENST00000593074 TMEM108Q6UXF1 575 aa16.41■□□□□ 0.22
CLIP3-206ENST00000593074 ZNF808Q8N4W9 903 aaPredicted RBP16.41■□□□□ 0.22
CLIP3-206ENST00000593074 TCTEX1D1Q8N7M0 179 aa16.41■□□□□ 0.22
CLIP3-206ENST00000593074 OR2G3Q8NGZ4 309 aa16.41■□□□□ 0.22
CLIP3-206ENST00000593074 PPP1R35Q8TAP8 253 aa16.41■□□□□ 0.22
CLIP3-206ENST00000593074 GNPNAT1Q96EK6 184 aaPredicted RBP16.41■□□□□ 0.22
CLIP3-206ENST00000593074 SCRT1Q9BWW7 348 aa16.41■□□□□ 0.22
CLIP3-206ENST00000593074 JKAMPQ9P055 326 aa16.41■□□□□ 0.22
CLIP3-206ENST00000593074 CADP27708 2225 aa16.41■□□□□ 0.22
CLIP3-206ENST00000593074 C9JQL5 133 aa16.41■□□□□ 0.22
CLIP3-206ENST00000593074 H3BP45 60 aa16.41■□□□□ 0.22
CLIP3-206ENST00000593074 TOR1AO14656 332 aa16.41■□□□□ 0.22
CLIP3-206ENST00000593074 TAS2R30P59541 319 aa16.41■□□□□ 0.22
CLIP3-206ENST00000593074 FAM216AQ8WUB2 273 aa16.41■□□□□ 0.22
CLIP3-206ENST00000593074 DCTN5Q9BTE1 182 aa16.41■□□□□ 0.22
CLIP3-206ENST00000593074 RP1L1Q8IWN7 2480 aaPredicted RBP16.4■□□□□ 0.22
CLIP3-206ENST00000593074 IGHV3OR15-7A0A075B7D8 119 aa16.4■□□□□ 0.22
CLIP3-206ENST00000593074 IGHV3-43A0A0B4J1X8 118 aa16.4■□□□□ 0.22
CLIP3-206ENST00000593074 DFFBO76075 338 aa16.4■□□□□ 0.22
CLIP3-206ENST00000593074 IGHV3-43DP0DP04 118 aa16.4■□□□□ 0.22
CLIP3-206ENST00000593074 GZMHP20718 246 aa16.4■□□□□ 0.22
CLIP3-206ENST00000593074 BRWD1-AS2P59051 145 aa16.4■□□□□ 0.22
CLIP3-206ENST00000593074 NUP37Q8NFH4 326 aa16.4■□□□□ 0.22
CLIP3-206ENST00000593074 RFESDQ8TAC1 157 aa16.4■□□□□ 0.22
CLIP3-206ENST00000593074 AGMATQ9BSE5 352 aa16.4■□□□□ 0.22
CLIP3-206ENST00000593074 DCHS1Q96JQ0 3298 aa16.4■□□□□ 0.22
CLIP3-206ENST00000593074 SNAPINO95295 136 aa16.39■□□□□ 0.21
CLIP3-206ENST00000593074 TMEM267Q0VDI3 215 aaPredicted RBP16.39■□□□□ 0.21
CLIP3-206ENST00000593074 ZNF66Q6ZN08 573 aa16.39■□□□□ 0.21
CLIP3-206ENST00000593074 FAM213BQ8TBF2 198 aa16.39■□□□□ 0.21
CLIP3-206ENST00000593074 FAM222BQ8WU58 562 aa16.39■□□□□ 0.21
CLIP3-206ENST00000593074 RFNGQ9Y644 331 aa16.39■□□□□ 0.21
CLIP3-206ENST00000593074 ATMQ13315 3056 aa16.39■□□□□ 0.21
CLIP3-206ENST00000593074 PTAFRP25105 342 aa16.39■□□□□ 0.21
CLIP3-206ENST00000593074 WFDC8Q8IUA0 241 aa16.39■□□□□ 0.21
CLIP3-206ENST00000593074 TCTEX1D2Q8WW35 142 aa16.39■□□□□ 0.21
CLIP3-206ENST00000593074 PSENENQ9NZ42 101 aa16.39■□□□□ 0.21
CLIP3-206ENST00000593074 IL19Q9UHD0 177 aa16.39■□□□□ 0.21
CLIP3-206ENST00000593074 JPT1Q9UK76 154 aa16.39■□□□□ 0.21
CLIP3-206ENST00000593074 DMXL2Q8TDJ6 3036 aa16.39■□□□□ 0.21
CLIP3-206ENST00000593074 IAPPP10997 89 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 OR2B11Q5JQS5 317 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 BTNL3Q6UXE8 466 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 LFNGQ8NES3 379 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 EDARADDQ8WWZ3 215 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 RND1Q92730 232 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms