RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 SCCPDHQ8NBX0 429 aa12.03□□□□□ -0.48
RANBP3-229ENST00000592771 RAB39BQ96DA2 213 aa12.03□□□□□ -0.48
RANBP3-229ENST00000592771 POLDIP2Q9Y2S7 368 aa12.03□□□□□ -0.48
RANBP3-229ENST00000592771 SLC25A15Q9Y619 301 aa12.03□□□□□ -0.48
RANBP3-229ENST00000592771 TRAV24A0A0B4J272 114 aa12.03□□□□□ -0.48
RANBP3-229ENST00000592771 IGHV1-18A0A0C4DH31 117 aa12.03□□□□□ -0.48
RANBP3-229ENST00000592771 KIAA1324LA8MWY0 1029 aaPredicted RBP12.03□□□□□ -0.48
RANBP3-229ENST00000592771 TGOLN2O43493 480 aa12.03□□□□□ -0.48
RANBP3-229ENST00000592771 FABP1P07148 127 aa12.03□□□□□ -0.48
RANBP3-229ENST00000592771 KITLGP21583 273 aa12.03□□□□□ -0.48
RANBP3-229ENST00000592771 PNRC1Q12796 327 aaPredicted RBP12.03□□□□□ -0.48
RANBP3-229ENST00000592771 Q6P435 159 aa12.03□□□□□ -0.48
RANBP3-229ENST00000592771 OR13D1Q8NGV5 346 aa12.03□□□□□ -0.48
RANBP3-229ENST00000592771 GPR146Q96CH1 333 aa12.03□□□□□ -0.48
RANBP3-229ENST00000592771 ABHD14AQ9BUJ0 271 aa12.03□□□□□ -0.48
RANBP3-229ENST00000592771 TMEM242Q9NWH2 141 aa12.03□□□□□ -0.48
RANBP3-229ENST00000592771 ACACAQ13085 2346 aa12.02□□□□□ -0.48
RANBP3-229ENST00000592771 IGHV2OR16-5A0A0B4J2B6 119 aa12.02□□□□□ -0.49
RANBP3-229ENST00000592771 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.02□□□□□ -0.49
RANBP3-229ENST00000592771 PGA5P0DJD9 388 aa12.02□□□□□ -0.49
RANBP3-229ENST00000592771 CEACAM8P31997 349 aaPredicted RBP12.02□□□□□ -0.49
RANBP3-229ENST00000592771 ZNF154Q13106 437 aa12.02□□□□□ -0.49
RANBP3-229ENST00000592771 PMS2P11Q13670 270 aa12.02□□□□□ -0.49
RANBP3-229ENST00000592771 RBMS3Q6XE24 437 aaKnown RBP12.02□□□□□ -0.49
RANBP3-229ENST00000592771 SPACA3Q8IXA5 215 aa12.02□□□□□ -0.49
RANBP3-229ENST00000592771 C1orf174Q8IYL3 243 aa12.02□□□□□ -0.49
RANBP3-229ENST00000592771 RPRMLQ8N4K4 120 aa12.02□□□□□ -0.49
RANBP3-229ENST00000592771 OR10V1Q8NGI7 309 aa12.02□□□□□ -0.49
RANBP3-229ENST00000592771 FAM57AQ8TBR7 257 aa12.02□□□□□ -0.49
RANBP3-229ENST00000592771 MBD3L1Q8WWY6 194 aa12.02□□□□□ -0.49
RANBP3-229ENST00000592771 BCL2L14Q9BZR8 327 aa12.02□□□□□ -0.49
RANBP3-229ENST00000592771 LOC102723971A0A1B0GUV8 181 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 A0A1B0GWJ7 208 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 NQO2P16083 231 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 HOXA5P20719 270 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 GLIPR1P48060 266 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 DLK1P80370 383 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 SERF2P84101 59 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 HAGHQ16775 308 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 ZNF474Q6S9Z5 364 aaPredicted RBP12.01□□□□□ -0.49
RANBP3-229ENST00000592771 TMEM217Q8N7C4 229 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 SCGB1C1Q8TD33 95 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 P2RX4Q99571 388 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 CISD1Q9NZ45 108 aaKnown RBP12.01□□□□□ -0.49
RANBP3-229ENST00000592771 ANKRD11Q6UB99 2663 aaPredicted RBP12.01□□□□□ -0.49
RANBP3-229ENST00000592771 A0A1B0GV50 99 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 MED19A0JLT2 244 aaPredicted RBP12.01□□□□□ -0.49
RANBP3-229ENST00000592771 FAM90A26D6RGX4 464 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 MLNRO43193 412 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 EPHA1P21709 976 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 OR2B8PP59922 312 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 C3orf36Q3SXR2 165 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 MBNL2Q5VZF2 373 aaKnown RBP12.01□□□□□ -0.49
RANBP3-229ENST00000592771 FAM180AQ6UWF9 173 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 SLC16A13Q7RTY0 426 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 ABHD17AQ96GS6 310 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 SFXN3Q9BWM7 321 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 NIT2Q9NQR4 276 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 GSN-AS1Q9NRJ2 163 aa12.01□□□□□ -0.49
RANBP3-229ENST00000592771 LIN7CQ9NUP9 197 aaKnown RBP12.01□□□□□ -0.49
RANBP3-229ENST00000592771 SPENQ96T58 3664 aaKnown RBP12□□□□□ -0.49
RANBP3-229ENST00000592771 H0YL77 283 aa12□□□□□ -0.49
RANBP3-229ENST00000592771 SYNGR2O43760 224 aa12□□□□□ -0.49
RANBP3-229ENST00000592771 NDUFS6O75380 124 aaKnown RBP12□□□□□ -0.49
RANBP3-229ENST00000592771 RPS10P46783 165 aaKnown RBP12□□□□□ -0.49
RANBP3-229ENST00000592771 HBG1P69891 147 aa12□□□□□ -0.49
RANBP3-229ENST00000592771 HBG2P69892 147 aa12□□□□□ -0.49
RANBP3-229ENST00000592771 ZNF146Q15072 292 aa12□□□□□ -0.49
RANBP3-229ENST00000592771 ELOBQ15370 118 aa12□□□□□ -0.49
RANBP3-229ENST00000592771 TIMM23BQ5SRD1 257 aa12□□□□□ -0.49
RANBP3-229ENST00000592771 SLC25A24Q6NUK1 477 aa12□□□□□ -0.49
RANBP3-229ENST00000592771 CYB561D1Q8N8Q1 229 aa12□□□□□ -0.49
RANBP3-229ENST00000592771 PINX1Q96BK5 328 aaKnown RBP12□□□□□ -0.49
RANBP3-229ENST00000592771 HEATR1Q9H583 2144 aaKnown RBP12□□□□□ -0.49
RANBP3-229ENST00000592771 HES4Q9HCC6 221 aa12□□□□□ -0.49
RANBP3-229ENST00000592771 ERRFI1Q9UJM3 462 aaPredicted RBP12□□□□□ -0.49
RANBP3-229ENST00000592771 TP53TG5Q9Y2B4 290 aa12□□□□□ -0.49
RANBP3-229ENST00000592771 MMP24Q9Y5R2 645 aa12□□□□□ -0.49
RANBP3-229ENST00000592771 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.99□□□□□ -0.49
RANBP3-229ENST00000592771 C1QTNF9BB2RNN3 333 aa11.99□□□□□ -0.49
RANBP3-229ENST00000592771 C3orf80F5H4A9 247 aa11.99□□□□□ -0.49
RANBP3-229ENST00000592771 CLN5O75503 358 aa11.99□□□□□ -0.49
RANBP3-229ENST00000592771 CDX1P47902 265 aaPredicted RBP11.99□□□□□ -0.49
RANBP3-229ENST00000592771 TDGF1P3P51864 188 aa11.99□□□□□ -0.49
RANBP3-229ENST00000592771 RUNX1Q01196 453 aa11.99□□□□□ -0.49
RANBP3-229ENST00000592771 KIAA0141Q14154 515 aaPredicted RBP11.99□□□□□ -0.49
RANBP3-229ENST00000592771 ZNF718Q3SXZ3 478 aa11.99□□□□□ -0.49
RANBP3-229ENST00000592771 C20orf204Q6ZNR8 217 aa11.99□□□□□ -0.49
RANBP3-229ENST00000592771 THNSL2Q86YJ6 484 aa11.99□□□□□ -0.49
RANBP3-229ENST00000592771 LURAP1LQ8IV03 231 aa11.99□□□□□ -0.49
RANBP3-229ENST00000592771 RNASE11Q8TAA1 199 aaKnown RBP11.99□□□□□ -0.49
RANBP3-229ENST00000592771 RDH5Q92781 318 aa11.99□□□□□ -0.49
RANBP3-229ENST00000592771 TINAGQ9UJW2 476 aa11.99□□□□□ -0.49
RANBP3-229ENST00000592771 LAMA5O15230 3695 aa11.99□□□□□ -0.49
RANBP3-229ENST00000592771 RNF212BA8MTL3 300 aa11.99□□□□□ -0.49
RANBP3-229ENST00000592771 HSPB6O14558 160 aa11.99□□□□□ -0.49
RANBP3-229ENST00000592771 CDIPTO14735 213 aa11.99□□□□□ -0.49
RANBP3-229ENST00000592771 PPIHO43447 177 aaKnown RBP11.99□□□□□ -0.49
RANBP3-229ENST00000592771 PSG2P11465 335 aa11.99□□□□□ -0.49
RANBP3-229ENST00000592771 Q6ZR03 302 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms