RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 RCN1Q15293 331 aa14.67□□□□□ -0.06
CCDC43-205ENST00000592333 ZNF260Q3ZCT1 412 aa14.67□□□□□ -0.06
CCDC43-205ENST00000592333 PYHIN1Q6K0P9 492 aa14.67□□□□□ -0.06
CCDC43-205ENST00000592333 SVOPQ8N4V2 548 aa14.67□□□□□ -0.06
CCDC43-205ENST00000592333 FAAP24Q9BTP7 215 aa14.67□□□□□ -0.06
CCDC43-205ENST00000592333 KLK15Q9H2R5 256 aa14.67□□□□□ -0.06
CCDC43-205ENST00000592333 TMEM14DPA8MWL7 114 aa14.66□□□□□ -0.06
CCDC43-205ENST00000592333 G3V318 75 aa14.66□□□□□ -0.06
CCDC43-205ENST00000592333 ARPC1BO15143 372 aaKnown RBP14.66□□□□□ -0.06
CCDC43-205ENST00000592333 OR3A3P47888 321 aa14.66□□□□□ -0.06
CCDC43-205ENST00000592333 SPHARQ15513 63 aa14.66□□□□□ -0.06
CCDC43-205ENST00000592333 HSD17B12Q53GQ0 312 aa14.66□□□□□ -0.06
CCDC43-205ENST00000592333 C19orf54Q5BKX5 351 aa14.66□□□□□ -0.06
CCDC43-205ENST00000592333 RBM48Q5RL73 367 aaKnown RBP14.66□□□□□ -0.06
CCDC43-205ENST00000592333 C6orf201Q7Z4U5 140 aa14.66□□□□□ -0.06
CCDC43-205ENST00000592333 OR6M1Q8NGM8 313 aa14.66□□□□□ -0.06
CCDC43-205ENST00000592333 EDARADDQ8WWZ3 215 aa14.66□□□□□ -0.06
CCDC43-205ENST00000592333 RITA1Q96K30 269 aa14.66□□□□□ -0.06
CCDC43-205ENST00000592333 URM1Q9BTM9 101 aaKnown RBP14.66□□□□□ -0.06
CCDC43-205ENST00000592333 PARP11Q9NR21 331 aa14.66□□□□□ -0.06
CCDC43-205ENST00000592333 PLEKHJ1Q9NW61 149 aa14.66□□□□□ -0.06
CCDC43-205ENST00000592333 RNF150Q9ULK6 438 aa14.66□□□□□ -0.06
CCDC43-205ENST00000592333 WSB1Q9Y6I7 421 aa14.66□□□□□ -0.06
CCDC43-205ENST00000592333 UCHL1P09936 223 aa14.65□□□□□ -0.06
CCDC43-205ENST00000592333 QRFPP83859 136 aa14.65□□□□□ -0.06
CCDC43-205ENST00000592333 UNC119Q13432 240 aa14.65□□□□□ -0.06
CCDC43-205ENST00000592333 CD200R1LQ6Q8B3 271 aa14.65□□□□□ -0.06
CCDC43-205ENST00000592333 FAM89BQ8N5H3 189 aa14.65□□□□□ -0.06
CCDC43-205ENST00000592333 OR5AN1Q8NGI8 311 aa14.65□□□□□ -0.06
CCDC43-205ENST00000592333 IL1F10Q8WWZ1 152 aa14.65□□□□□ -0.06
CCDC43-205ENST00000592333 AGMATQ9BSE5 352 aa14.65□□□□□ -0.06
CCDC43-205ENST00000592333 GNB4Q9HAV0 340 aa14.65□□□□□ -0.06
CCDC43-205ENST00000592333 HSF4Q9ULV5 492 aa14.65□□□□□ -0.06
CCDC43-205ENST00000592333 ERICH4A6NGS2 130 aa14.64□□□□□ -0.07
CCDC43-205ENST00000592333 RRHO14718 337 aa14.64□□□□□ -0.07
CCDC43-205ENST00000592333 CT45A6P0DMU7 189 aa14.64□□□□□ -0.07
CCDC43-205ENST00000592333 CT45A5P0DMU8 189 aa14.64□□□□□ -0.07
CCDC43-205ENST00000592333 CT45A7P0DMV0 189 aa14.64□□□□□ -0.07
CCDC43-205ENST00000592333 ZBTB25P24278 435 aa14.64□□□□□ -0.07
CCDC43-205ENST00000592333 CNTFRP26992 372 aa14.64□□□□□ -0.07
CCDC43-205ENST00000592333 BLVRBP30043 206 aaPredicted RBP14.64□□□□□ -0.07
CCDC43-205ENST00000592333 TRAM1Q15629 374 aa14.64□□□□□ -0.07
CCDC43-205ENST00000592333 FAM27D1Q5T7N8 215 aa14.64□□□□□ -0.07
CCDC43-205ENST00000592333 ASPHD1Q5U4P2 390 aa14.64□□□□□ -0.07
CCDC43-205ENST00000592333 OR10K2Q6IF99 312 aa14.64□□□□□ -0.07
CCDC43-205ENST00000592333 CEACAM19Q7Z692 300 aa14.64□□□□□ -0.07
CCDC43-205ENST00000592333 PRR25Q96S07 402 aa14.64□□□□□ -0.07
CCDC43-205ENST00000592333 CHMP1AQ9HD42 196 aaPredicted RBP14.64□□□□□ -0.07
CCDC43-205ENST00000592333 SCN3BQ9NY72 215 aa14.64□□□□□ -0.07
CCDC43-205ENST00000592333 FOXA2Q9Y261 457 aaPredicted RBP14.64□□□□□ -0.07
CCDC43-205ENST00000592333 LSM2Q9Y333 95 aaKnown RBP14.64□□□□□ -0.07
CCDC43-205ENST00000592333 WASHC3Q9Y3C0 194 aa14.64□□□□□ -0.07
CCDC43-205ENST00000592333 NUBP2Q9Y5Y2 271 aa14.64□□□□□ -0.07
CCDC43-205ENST00000592333 PSMA1P25786 263 aaKnown RBP14.63□□□□□ -0.07
CCDC43-205ENST00000592333 CX3CL1P78423 397 aa14.63□□□□□ -0.07
CCDC43-205ENST00000592333 AKIRIN2Q53H80 203 aa14.63□□□□□ -0.07
CCDC43-205ENST00000592333 FAM131AQ6UXB0 335 aa14.63□□□□□ -0.07
CCDC43-205ENST00000592333 PTX4Q96A99 478 aa14.63□□□□□ -0.07
CCDC43-205ENST00000592333 TMED9Q9BVK6 235 aa14.63□□□□□ -0.07
CCDC43-205ENST00000592333 SMAD5-AS1Q9Y6J3 95 aa14.63□□□□□ -0.07
CCDC43-205ENST00000592333 H0YJW9 148 aa14.62□□□□□ -0.07
CCDC43-205ENST00000592333 OVOL1O14753 267 aa14.62□□□□□ -0.07
CCDC43-205ENST00000592333 ST8SIA5O15466 376 aa14.62□□□□□ -0.07
CCDC43-205ENST00000592333 SPDEFO95238 335 aa14.62□□□□□ -0.07
CCDC43-205ENST00000592333 ARSBP15848 533 aa14.62□□□□□ -0.07
CCDC43-205ENST00000592333 CD40LGP29965 261 aa14.62□□□□□ -0.07
CCDC43-205ENST00000592333 GNB1P62873 340 aa14.62□□□□□ -0.07
CCDC43-205ENST00000592333 INSL4Q14641 139 aa14.62□□□□□ -0.07
CCDC43-205ENST00000592333 ZNF562Q6V9R5 426 aa14.62□□□□□ -0.07
CCDC43-205ENST00000592333 TOLLIPQ9H0E2 274 aa14.62□□□□□ -0.07
CCDC43-205ENST00000592333 LPAR5Q9H1C0 372 aa14.62□□□□□ -0.07
CCDC43-205ENST00000592333 SLA2Q9H6Q3 261 aa14.62□□□□□ -0.07
CCDC43-205ENST00000592333 ISYNA1Q9NPH2 558 aa14.62□□□□□ -0.07
CCDC43-205ENST00000592333 LINC01619G3V211 115 aa14.61□□□□□ -0.07
CCDC43-205ENST00000592333 SLC17A2O00624 439 aa14.61□□□□□ -0.07
CCDC43-205ENST00000592333 ARL6IP5O75915 188 aa14.61□□□□□ -0.07
CCDC43-205ENST00000592333 GSTP1P09211 210 aaKnown RBP14.61□□□□□ -0.07
CCDC43-205ENST00000592333 LGALS1P09382 135 aaKnown RBP14.61□□□□□ -0.07
CCDC43-205ENST00000592333 TPBGQ13641 420 aa14.61□□□□□ -0.07
CCDC43-205ENST00000592333 IRF3Q14653 427 aa14.61□□□□□ -0.07
CCDC43-205ENST00000592333 MED22Q15528 200 aa14.61□□□□□ -0.07
CCDC43-205ENST00000592333 C5orf24Q7Z6I8 188 aa14.61□□□□□ -0.07
CCDC43-205ENST00000592333 DCUN1D4Q92564 292 aa14.61□□□□□ -0.07
CCDC43-205ENST00000592333 UFD1Q92890 307 aa14.61□□□□□ -0.07
CCDC43-205ENST00000592333 RBMXL1Q96E39 390 aaKnown RBP14.61□□□□□ -0.07
CCDC43-205ENST00000592333 NICN1Q9BSH3 213 aa14.61□□□□□ -0.07
CCDC43-205ENST00000592333 C12orf4Q9NQ89 552 aa14.61□□□□□ -0.07
CCDC43-205ENST00000592333 TPSG1Q9NRR2 321 aa14.61□□□□□ -0.07
CCDC43-205ENST00000592333 A0A1W2PN81 502 aa14.6□□□□□ -0.07
CCDC43-205ENST00000592333 PTGES3LE9PB15 166 aa14.6□□□□□ -0.07
CCDC43-205ENST00000592333 C3orf84H3BNL1 204 aa14.6□□□□□ -0.07
CCDC43-205ENST00000592333 H7C2Y5 167 aa14.6□□□□□ -0.07
CCDC43-205ENST00000592333 CHRNA7P36544 502 aa14.6□□□□□ -0.07
CCDC43-205ENST00000592333 CEACAM6P40199 344 aa14.6□□□□□ -0.07
CCDC43-205ENST00000592333 PSMD7P51665 324 aa14.6□□□□□ -0.07
CCDC43-205ENST00000592333 HLA-DRB3P79483 266 aa14.6□□□□□ -0.07
CCDC43-205ENST00000592333 PLGLAQ15195 96 aa14.6□□□□□ -0.07
CCDC43-205ENST00000592333 RPL39P5Q59GN2 51 aa14.6□□□□□ -0.07
CCDC43-205ENST00000592333 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.6□□□□□ -0.07
CCDC43-205ENST00000592333 FLYWCH2Q96CP2 140 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms