RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 CFHR4Q92496 578 aa17.09■□□□□ 0.33
ATG4D-212ENST00000590096 AKR1E2Q96JD6 320 aa17.09■□□□□ 0.33
ATG4D-212ENST00000590096 NPFFR1Q9GZQ6 430 aa17.09■□□□□ 0.33
ATG4D-212ENST00000590096 PARP12Q9H0J9 701 aaKnown RBP17.09■□□□□ 0.33
ATG4D-212ENST00000590096 C11orf54Q9H0W9 315 aaPredicted RBP17.09■□□□□ 0.33
ATG4D-212ENST00000590096 IFI27L2Q9H2X8 130 aa17.09■□□□□ 0.33
ATG4D-212ENST00000590096 GHITMQ9H3K2 345 aa17.09■□□□□ 0.33
ATG4D-212ENST00000590096 BEX1Q9HBH7 125 aa17.09■□□□□ 0.33
ATG4D-212ENST00000590096 SAA2-SAA4A0A096LPE2 208 aa17.08■□□□□ 0.32
ATG4D-212ENST00000590096 A0A1B0GUS0 222 aa17.08■□□□□ 0.32
ATG4D-212ENST00000590096 RAB29O14966 203 aa17.08■□□□□ 0.32
ATG4D-212ENST00000590096 CTXN2P0C2S0 81 aa17.08■□□□□ 0.32
ATG4D-212ENST00000590096 SAA2P0DJI9 122 aaPredicted RBP17.08■□□□□ 0.32
ATG4D-212ENST00000590096 PTHLHP12272 177 aa17.08■□□□□ 0.32
ATG4D-212ENST00000590096 Q6ZSV7 163 aa17.08■□□□□ 0.32
ATG4D-212ENST00000590096 ODF3L1Q8IXM7 274 aa17.08■□□□□ 0.32
ATG4D-212ENST00000590096 OR4C13Q8NGP0 309 aa17.08■□□□□ 0.32
ATG4D-212ENST00000590096 DYNC2LI1Q8TCX1 351 aa17.08■□□□□ 0.32
ATG4D-212ENST00000590096 S1PR3Q99500 378 aa17.08■□□□□ 0.32
ATG4D-212ENST00000590096 MRPS7Q9Y2R9 242 aaKnown RBP17.08■□□□□ 0.32
ATG4D-212ENST00000590096 FAM90A9PA6NNJ1 464 aa17.07■□□□□ 0.32
ATG4D-212ENST00000590096 MDKP21741 143 aaPredicted RBP17.07■□□□□ 0.32
ATG4D-212ENST00000590096 OR3A3P47888 321 aa17.07■□□□□ 0.32
ATG4D-212ENST00000590096 HABP2Q14520 560 aaPredicted RBP17.07■□□□□ 0.32
ATG4D-212ENST00000590096 FAM71F2Q6NXP2 309 aa17.07■□□□□ 0.32
ATG4D-212ENST00000590096 CNIH2Q6PI25 160 aa17.07■□□□□ 0.32
ATG4D-212ENST00000590096 ZNF833PQ6ZTB9 187 aa17.07■□□□□ 0.32
ATG4D-212ENST00000590096 BEST4Q8NFU0 473 aa17.07■□□□□ 0.32
ATG4D-212ENST00000590096 SLC25A33Q9BSK2 321 aa17.07■□□□□ 0.32
ATG4D-212ENST00000590096 TOLLIPQ9H0E2 274 aa17.07■□□□□ 0.32
ATG4D-212ENST00000590096 RANBP3Q9H6Z4 567 aaPredicted RBP17.07■□□□□ 0.32
ATG4D-212ENST00000590096 IFT46Q9NQC8 304 aa17.07■□□□□ 0.32
ATG4D-212ENST00000590096 ANXA10Q9UJ72 324 aa17.07■□□□□ 0.32
ATG4D-212ENST00000590096 ZNF221Q9UK13 617 aa17.07■□□□□ 0.32
ATG4D-212ENST00000590096 ADAM30Q9UKF2 790 aa17.07■□□□□ 0.32
ATG4D-212ENST00000590096 IGHV3-72A0A0B4J1Y9 119 aa17.06■□□□□ 0.32
ATG4D-212ENST00000590096 RGS5O15539 181 aa17.06■□□□□ 0.32
ATG4D-212ENST00000590096 TSPAN9O75954 239 aa17.06■□□□□ 0.32
ATG4D-212ENST00000590096 OR2F2O95006 317 aa17.06■□□□□ 0.32
ATG4D-212ENST00000590096 IGKV1D-33P01593 117 aa17.06■□□□□ 0.32
ATG4D-212ENST00000590096 IGKV1-33P01594 117 aa17.06■□□□□ 0.32
ATG4D-212ENST00000590096 TMEM11P17152 192 aa17.06■□□□□ 0.32
ATG4D-212ENST00000590096 PRSS3P35030 304 aa17.06■□□□□ 0.32
ATG4D-212ENST00000590096 ARPC4P59998 168 aa17.06■□□□□ 0.32
ATG4D-212ENST00000590096 HOGA1Q86XE5 327 aa17.06■□□□□ 0.32
ATG4D-212ENST00000590096 GVQW1Q8N7I0 195 aa17.06■□□□□ 0.32
ATG4D-212ENST00000590096 ABHD14BQ96IU4 210 aa17.06■□□□□ 0.32
ATG4D-212ENST00000590096 RBM14Q96PK6 669 aaKnown RBP17.06■□□□□ 0.32
ATG4D-212ENST00000590096 AGMATQ9BSE5 352 aa17.06■□□□□ 0.32
ATG4D-212ENST00000590096 RSL24D1Q9UHA3 163 aaKnown RBP17.06■□□□□ 0.32
ATG4D-212ENST00000590096 RBM7Q9Y580 266 aaKnown RBP17.06■□□□□ 0.32
ATG4D-212ENST00000590096 MMP24Q9Y5R2 645 aa17.06■□□□□ 0.32
ATG4D-212ENST00000590096 CLPSL1A2RUU4 121 aa17.05■□□□□ 0.32
ATG4D-212ENST00000590096 MEIS3P1A6NDR6 274 aa17.05■□□□□ 0.32
ATG4D-212ENST00000590096 CD1BP29016 333 aa17.05■□□□□ 0.32
ATG4D-212ENST00000590096 GPR12P47775 334 aa17.05■□□□□ 0.32
ATG4D-212ENST00000590096 C3orf56Q8N813 242 aa17.05■□□□□ 0.32
ATG4D-212ENST00000590096 MRPL20Q9BYC9 149 aaKnown RBP17.05■□□□□ 0.32
ATG4D-212ENST00000590096 C16orf95Q9H693 158 aa17.05■□□□□ 0.32
ATG4D-212ENST00000590096 EXTL2Q9UBQ6 330 aa17.05■□□□□ 0.32
ATG4D-212ENST00000590096 RNF150Q9ULK6 438 aa17.05■□□□□ 0.32
ATG4D-212ENST00000590096 HNF4GQ14541 408 aa17.04■□□□□ 0.32
ATG4D-212ENST00000590096 RPL39P5Q59GN2 51 aa17.04■□□□□ 0.32
ATG4D-212ENST00000590096 SNX29P2Q8IUI4 249 aa17.04■□□□□ 0.32
ATG4D-212ENST00000590096 H1FOOQ8IZA3 346 aaPredicted RBP17.04■□□□□ 0.32
ATG4D-212ENST00000590096 OR2T10Q8NGZ9 312 aa17.04■□□□□ 0.32
ATG4D-212ENST00000590096 LINC01006Q8NI28 216 aa17.04■□□□□ 0.32
ATG4D-212ENST00000590096 RBM38Q9H0Z9 239 aaKnown RBP17.04■□□□□ 0.32
ATG4D-212ENST00000590096 M0QZK8 103 aa17.03■□□□□ 0.32
ATG4D-212ENST00000590096 ZNF701M0R085 212 aaPredicted RBP17.03■□□□□ 0.32
ATG4D-212ENST00000590096 HLA-DQB1P01920 261 aa17.03■□□□□ 0.32
ATG4D-212ENST00000590096 FCER2P06734 321 aa17.03■□□□□ 0.32
ATG4D-212ENST00000590096 OR8U9P0C7N5 309 aa17.03■□□□□ 0.32
ATG4D-212ENST00000590096 LSAMPQ13449 338 aa17.03■□□□□ 0.32
ATG4D-212ENST00000590096 FBLN7Q53RD9 439 aa17.03■□□□□ 0.32
ATG4D-212ENST00000590096 OR8U1Q8NH10 309 aa17.03■□□□□ 0.32
ATG4D-212ENST00000590096 OR2T6Q8NHC8 308 aa17.03■□□□□ 0.32
ATG4D-212ENST00000590096 NABP2Q9BQ15 211 aa17.03■□□□□ 0.32
ATG4D-212ENST00000590096 PRSS22Q9GZN4 317 aa17.03■□□□□ 0.32
ATG4D-212ENST00000590096 C6orf62Q9GZU0 229 aaPredicted RBP17.03■□□□□ 0.32
ATG4D-212ENST00000590096 OR2D2Q9H210 308 aa17.03■□□□□ 0.32
ATG4D-212ENST00000590096 MOB4Q9Y3A3 225 aa17.03■□□□□ 0.32
ATG4D-212ENST00000590096 RNF114Q9Y508 228 aa17.03■□□□□ 0.32
ATG4D-212ENST00000590096 CTDSP2O14595 271 aa17.02■□□□□ 0.32
ATG4D-212ENST00000590096 MOSP00540 346 aa17.02■□□□□ 0.32
ATG4D-212ENST00000590096 EBI3Q14213 229 aa17.02■□□□□ 0.32
ATG4D-212ENST00000590096 ARSJQ5FYB0 599 aaPredicted RBP17.02■□□□□ 0.32
ATG4D-212ENST00000590096 LAX1Q8IWV1 398 aa17.02■□□□□ 0.32
ATG4D-212ENST00000590096 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.02■□□□□ 0.32
ATG4D-212ENST00000590096 EAF1Q96JC9 268 aaPredicted RBP17.02■□□□□ 0.32
ATG4D-212ENST00000590096 ZNF251Q9BRH9 671 aa17.02■□□□□ 0.32
ATG4D-212ENST00000590096 SCPEP1Q9HB40 452 aa17.02■□□□□ 0.32
ATG4D-212ENST00000590096 NECAP2Q9NVZ3 263 aa17.02■□□□□ 0.32
ATG4D-212ENST00000590096 ZNF736B4DX44 427 aaPredicted RBP17.01■□□□□ 0.31
ATG4D-212ENST00000590096 NFYAP23511 347 aaPredicted RBP17.01■□□□□ 0.31
ATG4D-212ENST00000590096 C15orf40Q8WUR7 153 aa17.01■□□□□ 0.31
ATG4D-212ENST00000590096 SNAPC3Q92966 411 aa17.01■□□□□ 0.31
ATG4D-212ENST00000590096 SLIRPQ9GZT3 109 aaKnown RBP17.01■□□□□ 0.31
ATG4D-212ENST00000590096 MIXL1Q9H2W2 232 aa17.01■□□□□ 0.31
ATG4D-212ENST00000590096 ZNF702PQ9H963 129 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms