RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 RPS19P39019 145 aaKnown RBP13.94□□□□□ -0.18
H3F3B-207ENST00000589417 PITPNAQ00169 270 aa13.94□□□□□ -0.18
H3F3B-207ENST00000589417 HNF4GQ14541 408 aa13.94□□□□□ -0.18
H3F3B-207ENST00000589417 PNLIPRP3Q17RR3 467 aa13.94□□□□□ -0.18
H3F3B-207ENST00000589417 ZNF260Q3ZCT1 412 aa13.94□□□□□ -0.18
H3F3B-207ENST00000589417 IDNKQ5T6J7 187 aa13.94□□□□□ -0.18
H3F3B-207ENST00000589417 TREML4Q6UXN2 200 aa13.94□□□□□ -0.18
H3F3B-207ENST00000589417 OR5H6Q8NGV6 325 aa13.94□□□□□ -0.18
H3F3B-207ENST00000589417 SLC25A38Q96DW6 304 aa13.94□□□□□ -0.18
H3F3B-207ENST00000589417 PARP12Q9H0J9 701 aaKnown RBP13.94□□□□□ -0.18
H3F3B-207ENST00000589417 DCSTAMPQ9H295 470 aa13.94□□□□□ -0.18
H3F3B-207ENST00000589417 GAB2Q9UQC2 676 aa13.94□□□□□ -0.18
H3F3B-207ENST00000589417 VWFP04275 2813 aa13.93□□□□□ -0.18
H3F3B-207ENST00000589417 ST8SIA5O15466 376 aa13.93□□□□□ -0.18
H3F3B-207ENST00000589417 HSPA12AO43301 675 aa13.93□□□□□ -0.18
H3F3B-207ENST00000589417 IGHG2P01859 326 aa13.93□□□□□ -0.18
H3F3B-207ENST00000589417 OR3A3P47888 321 aa13.93□□□□□ -0.18
H3F3B-207ENST00000589417 ARFRP1Q13795 201 aa13.93□□□□□ -0.18
H3F3B-207ENST00000589417 Q8N9W7 124 aa13.93□□□□□ -0.18
H3F3B-207ENST00000589417 S1PR3Q99500 378 aa13.93□□□□□ -0.18
H3F3B-207ENST00000589417 FUNDC2Q9BWH2 189 aa13.93□□□□□ -0.18
H3F3B-207ENST00000589417 LIN7CQ9NUP9 197 aaKnown RBP13.93□□□□□ -0.18
H3F3B-207ENST00000589417 A0A075B6Q4 140 aa13.92□□□□□ -0.18
H3F3B-207ENST00000589417 PROP1O75360 226 aa13.92□□□□□ -0.18
H3F3B-207ENST00000589417 FBXO24O75426 580 aa13.92□□□□□ -0.18
H3F3B-207ENST00000589417 GSTT2P0CG29 244 aa13.92□□□□□ -0.18
H3F3B-207ENST00000589417 GSTT2BP0CG30 244 aa13.92□□□□□ -0.18
H3F3B-207ENST00000589417 TALDO1P37837 337 aa13.92□□□□□ -0.18
H3F3B-207ENST00000589417 C2orf68Q2NKX9 166 aa13.92□□□□□ -0.18
H3F3B-207ENST00000589417 TMEM95Q3KNT9 176 aa13.92□□□□□ -0.18
H3F3B-207ENST00000589417 FAM71E2Q8N5Q1 922 aa13.92□□□□□ -0.18
H3F3B-207ENST00000589417 MRPL20Q9BYC9 149 aaKnown RBP13.92□□□□□ -0.18
H3F3B-207ENST00000589417 ABCG5Q9H222 651 aa13.92□□□□□ -0.18
H3F3B-207ENST00000589417 MMP27Q9H306 513 aa13.92□□□□□ -0.18
H3F3B-207ENST00000589417 RDH8Q9NYR8 311 aa13.92□□□□□ -0.18
H3F3B-207ENST00000589417 ELF5Q9UKW6 265 aaPredicted RBP13.92□□□□□ -0.18
H3F3B-207ENST00000589417 PEX14O75381 377 aa13.91□□□□□ -0.18
H3F3B-207ENST00000589417 CT45A6P0DMU7 189 aa13.91□□□□□ -0.18
H3F3B-207ENST00000589417 CT45A5P0DMU8 189 aa13.91□□□□□ -0.18
H3F3B-207ENST00000589417 CT45A7P0DMV0 189 aa13.91□□□□□ -0.18
H3F3B-207ENST00000589417 TGFBR1P36897 503 aa13.91□□□□□ -0.18
H3F3B-207ENST00000589417 CD83Q01151 205 aa13.91□□□□□ -0.18
H3F3B-207ENST00000589417 ARSJQ5FYB0 599 aaPredicted RBP13.91□□□□□ -0.18
H3F3B-207ENST00000589417 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.91□□□□□ -0.18
H3F3B-207ENST00000589417 OR5AN1Q8NGI8 311 aa13.91□□□□□ -0.18
H3F3B-207ENST00000589417 SLC25A46Q96AG3 418 aa13.91□□□□□ -0.18
H3F3B-207ENST00000589417 KCTD12Q96CX2 325 aaKnown RBP13.91□□□□□ -0.18
H3F3B-207ENST00000589417 ABHD14BQ96IU4 210 aa13.91□□□□□ -0.18
H3F3B-207ENST00000589417 ZNF230Q9UIE0 474 aaPredicted RBP13.91□□□□□ -0.18
H3F3B-207ENST00000589417 WNK1Q9H4A3 2382 aa13.91□□□□□ -0.18
H3F3B-207ENST00000589417 OR5H14A6NHG9 310 aa13.9□□□□□ -0.18
H3F3B-207ENST00000589417 SH2D7A6NKC9 451 aaPredicted RBP13.9□□□□□ -0.18
H3F3B-207ENST00000589417 NCBP2LA6PVI3 153 aaKnown RBP13.9□□□□□ -0.18
H3F3B-207ENST00000589417 CTXN2P0C2S0 81 aa13.9□□□□□ -0.18
H3F3B-207ENST00000589417 CD28P10747 220 aa13.9□□□□□ -0.18
H3F3B-207ENST00000589417 MC5RP33032 325 aa13.9□□□□□ -0.18
H3F3B-207ENST00000589417 F2RL1P55085 397 aa13.9□□□□□ -0.18
H3F3B-207ENST00000589417 IGSF11Q5DX21 431 aa13.9□□□□□ -0.18
H3F3B-207ENST00000589417 CENPVQ7Z7K6 275 aaPredicted RBP13.9□□□□□ -0.18
H3F3B-207ENST00000589417 NDUFA11Q86Y39 141 aa13.9□□□□□ -0.18
H3F3B-207ENST00000589417 ANKRD13BQ86YJ7 626 aa13.9□□□□□ -0.18
H3F3B-207ENST00000589417 NPBQ8NG41 125 aa13.9□□□□□ -0.18
H3F3B-207ENST00000589417 OR5AU1Q8NGC0 362 aa13.9□□□□□ -0.18
H3F3B-207ENST00000589417 OR10J5Q8NHC4 309 aa13.9□□□□□ -0.18
H3F3B-207ENST00000589417 PHF21AQ96BD5 680 aa13.9□□□□□ -0.18
H3F3B-207ENST00000589417 ZNF580Q9UK33 172 aa13.9□□□□□ -0.18
H3F3B-207ENST00000589417 CMYA5Q8N3K9 4069 aa13.9□□□□□ -0.19
H3F3B-207ENST00000589417 IGKV1D-8A0A087WSZ0 117 aa13.89□□□□□ -0.19
H3F3B-207ENST00000589417 ADARB2-AS1A8MUL3 147 aa13.89□□□□□ -0.19
H3F3B-207ENST00000589417 SSX5O60225 188 aa13.89□□□□□ -0.19
H3F3B-207ENST00000589417 ALDH3B2P48448 385 aa13.89□□□□□ -0.19
H3F3B-207ENST00000589417 LSM3P62310 102 aaKnown RBP13.89□□□□□ -0.19
H3F3B-207ENST00000589417 RPL39P5Q59GN2 51 aa13.89□□□□□ -0.19
H3F3B-207ENST00000589417 RNF5Q99942 180 aa13.89□□□□□ -0.19
H3F3B-207ENST00000589417 MRPS26Q9BYN8 205 aaKnown RBP13.89□□□□□ -0.19
H3F3B-207ENST00000589417 DIABLOQ9NR28 239 aa13.89□□□□□ -0.19
H3F3B-207ENST00000589417 TMEM235A6NFC5 223 aa13.88□□□□□ -0.19
H3F3B-207ENST00000589417 H0YJW9 148 aa13.88□□□□□ -0.19
H3F3B-207ENST00000589417 GABARAPO95166 117 aa13.88□□□□□ -0.19
H3F3B-207ENST00000589417 CSF1P09603 554 aa13.88□□□□□ -0.19
H3F3B-207ENST00000589417 GPR12P47775 334 aa13.88□□□□□ -0.19
H3F3B-207ENST00000589417 ACTBP60709 375 aa13.88□□□□□ -0.19
H3F3B-207ENST00000589417 NCS1P62166 190 aa13.88□□□□□ -0.19
H3F3B-207ENST00000589417 TCTEX1D4Q5JR98 221 aa13.88□□□□□ -0.19
H3F3B-207ENST00000589417 C9orf152Q5JTZ5 239 aa13.88□□□□□ -0.19
H3F3B-207ENST00000589417 SLC35E3Q7Z769 313 aa13.88□□□□□ -0.19
H3F3B-207ENST00000589417 H1FOOQ8IZA3 346 aaPredicted RBP13.88□□□□□ -0.19
H3F3B-207ENST00000589417 C11orf44Q8N8P7 122 aa13.88□□□□□ -0.19
H3F3B-207ENST00000589417 CHPT1Q8WUD6 406 aa13.88□□□□□ -0.19
H3F3B-207ENST00000589417 MAFIPQ8WZ33 124 aa13.88□□□□□ -0.19
H3F3B-207ENST00000589417 CMTM3Q96MX0 182 aa13.88□□□□□ -0.19
H3F3B-207ENST00000589417 CITED2Q99967 270 aaPredicted RBP13.88□□□□□ -0.19
H3F3B-207ENST00000589417 RASL11BQ9BPW5 248 aa13.88□□□□□ -0.19
H3F3B-207ENST00000589417 AUNIPQ9H7T9 357 aa13.88□□□□□ -0.19
H3F3B-207ENST00000589417 ZNF221Q9UK13 617 aa13.88□□□□□ -0.19
H3F3B-207ENST00000589417 TRAV18A0A075B6X5 111 aa13.87□□□□□ -0.19
H3F3B-207ENST00000589417 BET1O15155 118 aa13.87□□□□□ -0.19
H3F3B-207ENST00000589417 KCNAB3O43448 404 aa13.87□□□□□ -0.19
H3F3B-207ENST00000589417 XRCC3O43542 346 aa13.87□□□□□ -0.19
H3F3B-207ENST00000589417 RBBP9O75884 186 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms