RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 HSPB1P04792 205 aaKnown RBP6.24□□□□□ -1.41
ZNF540-206ENST00000589117 OR8U8P0C7N1 319 aa6.24□□□□□ -1.41
ZNF540-206ENST00000589117 OR13C7P0DN81 318 aa6.24□□□□□ -1.41
ZNF540-206ENST00000589117 PTAFRP25105 342 aa6.24□□□□□ -1.41
ZNF540-206ENST00000589117 EIF2S3P41091 472 aaKnown RBP6.24□□□□□ -1.41
ZNF540-206ENST00000589117 IGFL2Q6UWQ7 119 aa6.24□□□□□ -1.41
ZNF540-206ENST00000589117 ZNF645Q8N7E2 425 aa6.24□□□□□ -1.41
ZNF540-206ENST00000589117 FDCSPQ8NFU4 85 aa6.24□□□□□ -1.41
ZNF540-206ENST00000589117 EGLN1Q9GZT9 426 aa6.24□□□□□ -1.41
ZNF540-206ENST00000589117 MMP24Q9Y5R2 645 aa6.24□□□□□ -1.41
ZNF540-206ENST00000589117 DNAJC13O75165 2243 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 TRAV1-1A0A0B4J248 108 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 A0A1W2PR80 420 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 MEX3AA1L020 520 aaKnown RBP6.23□□□□□ -1.41
ZNF540-206ENST00000589117 NKX2-8O15522 239 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 LY86O95711 162 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 COX5AP20674 150 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 PAX9P55771 341 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 KHDC3LQ587J8 217 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 C5orf24Q7Z6I8 188 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 PIP4P1Q86T03 277 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 WDR86Q86TI4 376 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 FGFRL1Q8N441 504 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 DRAM1Q8N682 238 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 CIB3Q96Q77 187 aaPredicted RBP6.23□□□□□ -1.41
ZNF540-206ENST00000589117 CLCC1Q96S66 551 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 NIPSNAP3BQ9BS92 247 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 PSMG3Q9BT73 122 aaPredicted RBP6.23□□□□□ -1.41
ZNF540-206ENST00000589117 HES4Q9HCC6 221 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 PLSCR4Q9NRQ2 329 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 TINAGQ9UJW2 476 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 ZNF407Q9C0G0 2248 aa6.23□□□□□ -1.41
ZNF540-206ENST00000589117 A0A1B0GV50 99 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 SPINT2O43291 252 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 NXPH3O95157 252 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 TMEM50AO95807 157 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 IFNA1P01562 189 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 KITLGP21583 273 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 PPP1CCP36873 323 aaKnown RBP6.22□□□□□ -1.41
ZNF540-206ENST00000589117 GABRA2P47869 451 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 PMP22Q01453 160 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 ATP6V1FQ16864 119 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 ACSF3Q4G176 576 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-206ENST00000589117 KRBOX4Q5JUW0 171 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 LINC00518Q8N0U6 118 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 ZADH2Q8N4Q0 377 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 FAM216AQ8WUB2 273 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 LURAP1Q96LR2 239 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 SCRT1Q9BWW7 348 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 PARD6GQ9BYG4 376 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-206ENST00000589117 RAB9BQ9NP90 201 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-206ENST00000589117 PROCRQ9UNN8 238 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 KLF2Q9Y5W3 355 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-206ENST00000589117 PUS1Q9Y606 427 aaKnown RBP eCLIP6.22□□□□□ -1.41
ZNF540-206ENST00000589117 DMDP11532 3685 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 COL6A3P12111 3177 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 B4DEV8 164 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 H3BP45 60 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 J3KRW8 73 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 ADH4P08319 380 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 FTH1P19P0C7X4 201 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 KIR2DL2P43627 348 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-206ENST00000589117 UBE2KP61086 200 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 ERVS71-1P61550 626 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 NKX6-1P78426 367 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-206ENST00000589117 GUSBP1Q15486 140 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 EIF2S3LQ2VIR3 472 aaKnown RBP6.22□□□□□ -1.41
ZNF540-206ENST00000589117 ACP7Q6ZNF0 438 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 OR10G4Q8NGN3 311 aa6.22□□□□□ -1.41
ZNF540-206ENST00000589117 HSD17B10Q99714 261 aaKnown RBP6.22□□□□□ -1.41
ZNF540-206ENST00000589117 TRAV39A0A0B4J263 110 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 CXorf65A6NEN9 183 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 KIAA1324LA8MWY0 1029 aaPredicted RBP6.21□□□□□ -1.41
ZNF540-206ENST00000589117 OR2C1O95371 312 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 IFNA17P01571 189 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 IGLV2-14P01704 120 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 MBP02144 154 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 S100A9P06702 114 aaKnown RBP6.21□□□□□ -1.41
ZNF540-206ENST00000589117 METTL15P1P0C7V9 234 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 GZMHP20718 246 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 TAGLN2P37802 199 aaKnown RBP6.21□□□□□ -1.41
ZNF540-206ENST00000589117 OR3A1P47881 315 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 FABP6P51161 128 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 TMEM267Q0VDI3 215 aaPredicted RBP6.21□□□□□ -1.41
ZNF540-206ENST00000589117 HAGHQ16775 308 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 ZNF585BQ52M93 769 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 ZNF506Q5JVG8 444 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 SPANXN5Q5MJ07 72 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 RBMS3Q6XE24 437 aaKnown RBP6.21□□□□□ -1.41
ZNF540-206ENST00000589117 ZNF66Q6ZN08 573 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 WDR31Q8NA23 367 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 HIST1H2BAQ96A08 127 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 RARRES2Q99969 163 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 TOLLIPQ9H0E2 274 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 OR2D2Q9H210 308 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 PLA2G2DQ9UNK4 145 aa6.21□□□□□ -1.41
ZNF540-206ENST00000589117 ARHGAP21Q5T5U3 1957 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 A0A087WWC5 75 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 A0A0G2JRQ6 117 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms