RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 MAFIPQ8WZ33 124 aa7.33□□□□□ -1.24
CIRBP-218ENST00000588344 ZNF48Q96MX3 618 aaPredicted RBP7.33□□□□□ -1.24
CIRBP-218ENST00000588344 SSX3Q99909 188 aa7.33□□□□□ -1.24
CIRBP-218ENST00000588344 AGMATQ9BSE5 352 aa7.33□□□□□ -1.24
CIRBP-218ENST00000588344 C11orf54Q9H0W9 315 aaPredicted RBP7.33□□□□□ -1.24
CIRBP-218ENST00000588344 OR1A1Q9P1Q5 309 aa7.33□□□□□ -1.24
CIRBP-218ENST00000588344 OR2W1Q9Y3N9 320 aa7.33□□□□□ -1.24
CIRBP-218ENST00000588344 RBM7Q9Y580 266 aaKnown RBP7.33□□□□□ -1.24
CIRBP-218ENST00000588344 MXRA5Q9NR99 2828 aa7.33□□□□□ -1.24
CIRBP-218ENST00000588344 NAV3Q8IVL0 2385 aa7.33□□□□□ -1.24
CIRBP-218ENST00000588344 ZFHX3Q15911 3703 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 IGKV1D-8A0A087WSZ0 117 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 ZNF736B4DX44 427 aaPredicted RBP7.32□□□□□ -1.24
CIRBP-218ENST00000588344 HSD17B6O14756 317 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 HOXA3O43365 443 aaPredicted RBP7.32□□□□□ -1.24
CIRBP-218ENST00000588344 IFNA6P05013 189 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 RNASE1P07998 156 aaKnown RBP7.32□□□□□ -1.24
CIRBP-218ENST00000588344 CSF1P09603 554 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 PTHLHP12272 177 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 CD1BP29016 333 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 MC5RP33032 325 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 GPR12P47775 334 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 LUMP51884 338 aaPredicted RBP7.32□□□□□ -1.24
CIRBP-218ENST00000588344 TAS2R19P59542 299 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 ZNF45Q02386 682 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 SLC9A3R2Q15599 337 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 CNPY1Q3B7I2 92 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 LPCAT3Q6P1A2 487 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 C16orf87Q6PH81 154 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 ZNF833PQ6ZTB9 187 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 C16orf82Q7Z2V1 217 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 LYSMD2Q8IV50 215 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 GDPD1Q8N9F7 314 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 OR52I2Q8NH67 350 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 RTN4IP1Q8WWV3 396 aaPredicted RBP7.32□□□□□ -1.24
CIRBP-218ENST00000588344 SNAPC3Q92966 411 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 AKR1E2Q96JD6 320 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 PTTG2Q9NZH5 202 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 KLK11Q9UBX7 282 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 RBMX2Q9Y388 322 aaKnown RBP7.32□□□□□ -1.24
CIRBP-218ENST00000588344 ARHGAP32A7KAX9 2087 aa7.32□□□□□ -1.24
CIRBP-218ENST00000588344 FN1P02751 2386 aaKnown RBP7.31□□□□□ -1.24
CIRBP-218ENST00000588344 IGHV1-3A0A0C4DH29 117 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 A0A1W2PPE3 182 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 MEIS3P1A6NDR6 274 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 DNAJC9-AS1A6NH13 148 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 SLC31A2O15432 143 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 TUSC2O75896 110 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 CRYBA1P05813 215 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 OR8U9P0C7N5 309 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 NFYAP23511 347 aaPredicted RBP7.31□□□□□ -1.24
CIRBP-218ENST00000588344 HLA-DMAP28067 261 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 FCGR2CP31995 323 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 HRH1P35367 487 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 AP3S2P59780 193 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 HERV-K104P61576 105 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 TSPAN5P62079 268 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 UBA52P62987 128 aaKnown RBP7.31□□□□□ -1.24
CIRBP-218ENST00000588344 HABP2Q14520 560 aaPredicted RBP7.31□□□□□ -1.24
CIRBP-218ENST00000588344 MEF2DQ14814 521 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 PYDC2Q56P42 97 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 RNASE10Q5GAN6 216 aaKnown RBP7.31□□□□□ -1.24
CIRBP-218ENST00000588344 VAX1Q5SQQ9 334 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 LDLRAD2Q5SZI1 272 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 UTF1Q5T230 341 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 C5orf24Q7Z6I8 188 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 ODF3L1Q8IXM7 274 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 Q8N402 240 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 ZDHHC22Q8N966 263 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 ZBTB34Q8NCN2 500 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 OR8U1Q8NH10 309 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 C17orf50Q8WW18 174 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 CAPSLQ8WWF8 208 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 S100ZQ8WXG8 99 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 ADTRPQ96IZ2 230 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 TEP1Q99973 2627 aaKnown RBP7.31□□□□□ -1.24
CIRBP-218ENST00000588344 THAP7Q9BT49 309 aaPredicted RBP7.31□□□□□ -1.24
CIRBP-218ENST00000588344 IFI27L2Q9H2X8 130 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 EHFQ9NZC4 300 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 VPREB3Q9UKI3 123 aa7.31□□□□□ -1.24
CIRBP-218ENST00000588344 SOX21Q9Y651 276 aaPredicted RBP7.31□□□□□ -1.24
CIRBP-218ENST00000588344 SONP18583 2426 aaKnown RBP7.3□□□□□ -1.24
CIRBP-218ENST00000588344 NF1P21359 2839 aa7.3□□□□□ -1.24
CIRBP-218ENST00000588344 SAA2-SAA4A0A096LPE2 208 aa7.3□□□□□ -1.24
CIRBP-218ENST00000588344 MDFIC2A0A1B0GVS7 189 aa7.3□□□□□ -1.24
CIRBP-218ENST00000588344 A0A1W2PPI3 338 aa7.3□□□□□ -1.24
CIRBP-218ENST00000588344 FAM90A9PA6NNJ1 464 aa7.3□□□□□ -1.24
CIRBP-218ENST00000588344 H3BUX3 64 aa7.3□□□□□ -1.24
CIRBP-218ENST00000588344 M0QZK8 103 aa7.3□□□□□ -1.24
CIRBP-218ENST00000588344 TIMM23O14925 209 aa7.3□□□□□ -1.24
CIRBP-218ENST00000588344 ST8SIA5O15466 376 aa7.3□□□□□ -1.24
CIRBP-218ENST00000588344 VENTXO95231 258 aa7.3□□□□□ -1.24
CIRBP-218ENST00000588344 PPYP01298 95 aa7.3□□□□□ -1.24
CIRBP-218ENST00000588344 IGHV4-59P01825 116 aa7.3□□□□□ -1.24
CIRBP-218ENST00000588344 PMP2P02689 132 aa7.3□□□□□ -1.24
CIRBP-218ENST00000588344 CD74P04233 296 aa7.3□□□□□ -1.24
CIRBP-218ENST00000588344 SAA2P0DJI9 122 aaPredicted RBP7.3□□□□□ -1.24
CIRBP-218ENST00000588344 S100GP29377 79 aa7.3□□□□□ -1.24
CIRBP-218ENST00000588344 FAUP35544 74 aaKnown RBP7.3□□□□□ -1.24
CIRBP-218ENST00000588344 ECI1P42126 302 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms