RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 DHRS2Q13268 280 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 Q3ZCU0 254 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 TMEM128Q5BJH2 165 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 METTL11BQ5VVY1 283 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 ZNF626Q68DY1 528 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 C1orf229Q6ZS94 237 aaPredicted RBP9.23□□□□□ -0.93
VMP1-207ENST00000588131 SLC25A48Q6ZT89 311 aaKnown RBP9.23□□□□□ -0.93
VMP1-207ENST00000588131 LYG2Q86SG7 212 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 TBC1D26Q86UD7 250 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 ODF3L1Q8IXM7 274 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 MAPK1IP1LQ8NDC0 245 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 BVESQ8NE79 360 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 RTN4IP1Q8WWV3 396 aaPredicted RBP9.23□□□□□ -0.93
VMP1-207ENST00000588131 C1orf159Q96HA4 380 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 REG4Q9BYZ8 158 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 SIRPDQ9H106 197 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 NAA60Q9H7X0 242 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 SIRT7Q9NRC8 400 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 PRR13Q9NZ81 148 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 CSMD2Q7Z408 3487 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 SPG11Q96JI7 2443 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 PTPN13Q12923 2485 aa9.23□□□□□ -0.93
VMP1-207ENST00000588131 ABCA2Q9BZC7 2435 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 IGHV2-26A0A0B4J1V2 119 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 hCG_1809904A0A1W2PP81 198 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 A0A1W2PPE2 198 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 A0A1W2PR64 198 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 A0A1W2PRV1 198 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 J3QR06 171 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 MPPED1O15442 326 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 SFT2D2O95562 160 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 HLA-AP01891 365 aaKnown RBP9.22□□□□□ -0.93
VMP1-207ENST00000588131 MMP9P14780 707 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 VAMP1P23763 118 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 CD34P28906 385 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 GPR12P47775 334 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 RAB7AP51149 207 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 BCAP31P51572 246 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 KLRD1Q13241 179 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 EIF4EBP1Q13541 118 aaPredicted RBP9.22□□□□□ -0.93
VMP1-207ENST00000588131 SLC9A3R2Q15599 337 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 MSMO1Q15800 293 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 RPL39P5Q59GN2 51 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 HCP5Q6MZN7 132 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 FAHD2BQ6P2I3 314 aaPredicted RBP9.22□□□□□ -0.93
VMP1-207ENST00000588131 BTNL3Q6UXE8 466 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 VMO1Q7Z5L0 202 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 LYG1Q8N1E2 194 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 ABHD12Q8N2K0 398 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 CCDC71LQ8N9Z2 235 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 WFDC11Q8NEX6 87 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 OR9G1Q8NH87 305 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 ZNF596Q8TC21 504 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 ZNF431Q8TF32 576 aaPredicted RBP9.22□□□□□ -0.93
VMP1-207ENST00000588131 CASTOR1Q8WTX7 329 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 FAM216AQ8WUB2 273 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 TNFRSF14Q92956 283 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 FAHD2AQ96GK7 314 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 AKR1E2Q96JD6 320 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 DMRTB1Q96MA1 342 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 FOXC2Q99958 501 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 OR51J1Q9H342 316 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 METTL8Q9H825 291 aaKnown RBP9.22□□□□□ -0.93
VMP1-207ENST00000588131 GPN1Q9HCN4 374 aaPredicted RBP9.22□□□□□ -0.93
VMP1-207ENST00000588131 INSIG2Q9Y5U4 225 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 KPTNQ9Y664 436 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 CELSR2Q9HCU4 2923 aa9.22□□□□□ -0.93
VMP1-207ENST00000588131 SAA2-SAA4A0A096LPE2 208 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 TEX13DA0A0J9YY54 714 aaPredicted RBP9.21□□□□□ -0.94
VMP1-207ENST00000588131 SNRPGP15A8MWD9 76 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 CREBL2O60519 120 aaPredicted RBP9.21□□□□□ -0.94
VMP1-207ENST00000588131 MSMBP08118 114 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 OR5AC1P0C628 307 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 SAA2P0DJI9 122 aaPredicted RBP9.21□□□□□ -0.94
VMP1-207ENST00000588131 PRTN3P24158 256 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 LINC00205P59089 165 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 RPL30P62888 115 aaKnown RBP9.21□□□□□ -0.94
VMP1-207ENST00000588131 SP6Q3SY56 376 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 LIN54Q6MZP7 749 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 C1orf122Q6ZSJ8 110 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 SGPP2Q8IWX5 399 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 CMTM1Q8IZ96 169 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 PNKDQ8N490 385 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 LINC00311Q8N616 119 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 C8orf31Q8N9H6 132 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 TP53RKQ96S44 253 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 TBX15Q96SF7 602 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 ZNF251Q9BRH9 671 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 CLEC7AQ9BXN2 247 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 GAB2Q9UQC2 676 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 CR1P17927 2039 aa9.21□□□□□ -0.94
VMP1-207ENST00000588131 ANKRD17O75179 2603 aaKnown RBP9.2□□□□□ -0.94
VMP1-207ENST00000588131 C3orf85A0A1B0GTC6 90 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 B4DSR2 109 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 RNASEK-C17orf49H0YIS7 233 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 M0R1X1 148 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 TOR1AO14656 332 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 SLC22A5O76082 557 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 TOX4O94842 621 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 DUS4LO95620 317 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms