RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	FRYL	O94915	3013 aa		3.21	□□□□□ -1.9
TUBD1-208	ENST00000588009	SSC5D	A1L4H1	1573 aa		3.21	□□□□□ -1.9
TUBD1-208	ENST00000588009	RGPD5	Q99666	1765 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	ANKAR	Q7Z5J8	1434 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	TECTA	O75443	2155 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	GMNC	A6NCL1	334 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	LRCOL1	A6NCL2	159 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009		F5H5K5	113 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	LIN7A	O14910	233 aa	Predicted RBP	3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	TCF21	O43680	179 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	CRTAP	O75718	401 aa	Predicted RBP	3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	IGHV1-46	P01743	117 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	IGKV3-11	P04433	115 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	PYCR1	P32322	319 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	TGM4	P49221	684 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	RPL14	P50914	215 aa	Known RBP	3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	FAM3A	P98173	230 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	MOBP	Q13875	183 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	ZNF235	Q14590	738 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	GOLGA7B	Q2TAP0	167 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	OR5L1	Q8NGL2	311 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	DNAJB3	Q8WWF6	145 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	LINC00477	Q96M19	166 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	PEBP4	Q96S96	227 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	EBPL	Q9BY08	206 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	PARD6G	Q9BYG4	376 aa	Predicted RBP	3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	UCK1	Q9HA47	277 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	FAM60A	Q9NP50	221 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	NAGK	Q9UJ70	344 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	ZNF835	Q9Y2P0	537 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	POLR3A	O14802	1390 aa	Predicted RBP	3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	DMD	P11532	3685 aa		3.2	□□□□□ -1.9
TUBD1-208	ENST00000588009	NBEAL1	Q6ZS30	2694 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	OTOGL	Q3ZCN5	2332 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	IZUMO1R	A6ND01	250 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	RPL36A-HNRNPH2	H7BZ11	118 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	MFNG	O00587	321 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	CYTH3	O43739	400 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	PSIP1	O75475	530 aa	Known RBP	3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	ATP6V1G2	O95670	118 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	EPPIN	O95925	133 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	NRAS	P01111	189 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	HRAS	P01112	189 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	KRAS	P01116	189 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	RCVRN	P35243	200 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	CDC34	P49427	236 aa	Predicted RBP	3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	DYNLL1	P63167	89 aa	Known RBP	3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	TMEM215	Q68D42	235 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	FAM151B	Q6UXP7	276 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	OLIG3	Q7RTU3	272 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	NEGR1	Q7Z3B1	354 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	MARCH3	Q86UD3	253 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	SLC13A5	Q86YT5	568 aa	Predicted RBP	3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	BLID	Q8IZY5	108 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	MUC15	Q8N387	334 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	C1orf50	Q9BV19	199 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	CYTL1	Q9NRR1	136 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	DMAC2	Q9NW81	257 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	HMGXB4	Q9UGU5	601 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	POMP	Q9Y244	141 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	SLC22A7	Q9Y694	548 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	KIF24	Q5T7B8	1368 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	KMT2E	Q8IZD2	1858 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	RP1L1	Q8IWN7	2480 aa	Predicted RBP	3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	SLX4	Q8IY92	1834 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009		A0A0G2JMZ2	1700 aa		3.19	□□□□□ -1.9
TUBD1-208	ENST00000588009	CHD9	Q3L8U1	2897 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	LRRK2	Q5S007	2527 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	FREM2	Q5SZK8	3169 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	COL12A1	Q99715	3063 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009		A8MUU9	505 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	GOLGA8K	D6RF30	607 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	GOLGA8M	H3BSY2	632 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	ATP8B1	O43520	1251 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	ZNF286B	P0CG31	522 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	F8A1	P23610	371 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	HAAO	P46952	286 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	IDH2	P48735	452 aa	Known RBP	3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	ZNF83	P51522	516 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	KRTAP21-3	Q3LHN1	58 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	MRPL2	Q5T653	305 aa	Known RBP	3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	TBPL2	Q6SJ96	375 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	DAZ4	Q86SG3	579 aa	Known RBP	3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	OR4P4	Q8NGL7	312 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	DTD1	Q8TEA8	209 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	PRSS27	Q9BQR3	290 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	C11orf49	Q9H6J7	331 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	DAZ1	Q9NQZ3	744 aa	Known RBP	3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	PLEKHJ1	Q9NW61	149 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	TBL2	Q9Y4P3	447 aa	Known RBP	3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	ZSWIM8	A7E2V4	1837 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	KIF26A	Q9ULI4	1882 aa	Predicted RBP	3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	BRWD1	Q9NSI6	2320 aa		3.18	□□□□□ -1.9
TUBD1-208	ENST00000588009	AFDN	P55196	1824 aa	Known RBP	3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	C16orf90	A8MZG2	172 aa		3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	CDRT1	O95170	752 aa		3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	HLA-A	P01891	365 aa	Known RBP	3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	GTF2F2	P13984	249 aa		3.17	□□□□□ -1.9
TUBD1-208	ENST00000588009	GRPR	P30550	384 aa		3.17	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms