RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 EHFQ9NZC4 300 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 AMMECR1Q9Y4X0 333 aaPredicted RBP8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 SAA2-SAA4A0A096LPE2 208 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 ANKRD20A5PA0PJZ0 165 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 ZNF736B4DX44 427 aaPredicted RBP8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 PROP1O75360 226 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 CD74P04233 296 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 SAA2P0DJI9 122 aaPredicted RBP8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 CEACAM3P40198 252 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 RAB7AP51149 207 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 ZNF137PP52743 207 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 ZNF45Q02386 682 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 SSBP1Q04837 148 aaKnown RBP8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 SCGB2A2Q13296 93 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 DYRK1AQ13627 763 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 BAK1Q16611 211 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 RPL39P5Q59GN2 51 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 ZNF660Q6AZW8 331 aaPredicted RBP8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 FAAP20Q6NZ36 180 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 DHRS11Q6UWP2 260 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 LINC00299Q6ZSB3 139 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 GIMAP1Q8WWP7 306 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 TOMM40LQ969M1 308 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 ZDHHC16Q969W1 377 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 RPEQ96AT9 228 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 CREB3L1Q96BA8 519 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 C5orf30Q96GV9 206 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 DUX5Q96PT3 197 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 SSX3Q99909 188 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 ZNF251Q9BRH9 671 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 ESM1Q9NQ30 184 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 OR2W1Q9Y3N9 320 aa8.63□□□□□ -1.03
SMARCA4-213ENST00000587988 A0A1W2PPI3 338 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 HSD17B6O14756 317 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 RAB29O14966 203 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 HOXA3O43365 443 aaPredicted RBP8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 PPYP01298 95 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 IGLV2-14P01704 120 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 IGHV4-59P01825 116 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 CD24P25063 80 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 IL3RAP26951 378 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 IER3P46695 156 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 LINC00205P59089 165 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 TAS2R19P59542 299 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 SRSF2Q01130 221 aaKnown RBP8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 ZNF816Q0VGE8 651 aaPredicted RBP8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 BAMBIQ13145 260 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 FBLN7Q53RD9 439 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 VAX1Q5SQQ9 334 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 STEAP1BQ6NZ63 245 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 ZNF833PQ6ZTB9 187 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 ZDHHC22Q8N966 263 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 GDPD1Q8N9F7 314 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 PIFOQ8TCI5 191 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 ZNF418Q8TF45 676 aaPredicted RBP8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 RTN4IP1Q8WWV3 396 aaPredicted RBP8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 ZNF2Q9BSG1 426 aaPredicted RBP8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 OR2D2Q9H210 308 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 TNFRSF19Q9NS68 423 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 SDHAF2Q9NX18 166 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 PIPOXQ9P0Z9 390 aa8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 ZNF107Q9UII5 783 aaPredicted RBP8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 RBM7Q9Y580 266 aaKnown RBP8.62□□□□□ -1.03
SMARCA4-213ENST00000587988 IGHV3-72A0A0B4J1Y9 119 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 IGHV1-3A0A0C4DH29 117 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 DNAJC9-AS1A6NH13 148 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 VGLL3A8MV65 326 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 OOSP1A8MZH6 123 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 TIMM23O14925 209 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 VENTXO95231 258 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 RAB3DO95716 219 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 GAPDHP04406 335 aaKnown RBP8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 CSF1P09603 554 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 ZNF735P0CB33 412 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 GPR12P47775 334 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 LUMP51884 338 aaPredicted RBP8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 FXYD4P59646 89 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 HILS1P60008 231 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 TSPAN5P62079 268 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 KLF9Q13886 244 aaPredicted RBP8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 SLC9A3R2Q15599 337 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 LRRC75BQ2VPJ9 315 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 ACTBL2Q562R1 376 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 RNASE10Q5GAN6 216 aaKnown RBP8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 RBMS3Q6XE24 437 aaKnown RBP8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 PRIMA1Q86XR5 153 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 TGIF2LXQ8IUE1 241 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 DRAM1Q8N682 238 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 DRAXINQ8NBI3 349 aaPredicted RBP8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 OR4C16Q8NGL9 310 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 OR6F1Q8NGZ6 308 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 S100ZQ8WXG8 99 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 CFHR4Q92496 578 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 MRPL20Q9BYC9 149 aaKnown RBP8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 FXYD6Q9H0Q3 95 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 CCL28Q9NRJ3 127 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 TAS2R8Q9NYW2 309 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 ZNF221Q9UK13 617 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 GAB2Q9UQC2 676 aa8.61□□□□□ -1.03
SMARCA4-213ENST00000587988 OR5H14A6NHG9 310 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms