RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 IL3RAP26951 378 aa13.76□□□□□ -0.21
PRKCSH-203ENST00000586486 LUMP51884 338 aaPredicted RBP13.76□□□□□ -0.21
PRKCSH-203ENST00000586486 LGALS4P56470 323 aa13.76□□□□□ -0.21
PRKCSH-203ENST00000586486 HERV-K104P61576 105 aa13.76□□□□□ -0.21
PRKCSH-203ENST00000586486 RUSC1-AS1Q66K80 236 aa13.76□□□□□ -0.21
PRKCSH-203ENST00000586486 BRD3OSQ6XYD6 125 aa13.76□□□□□ -0.21
PRKCSH-203ENST00000586486 LDLRAD3Q86YD5 345 aa13.76□□□□□ -0.21
PRKCSH-203ENST00000586486 ODF3L1Q8IXM7 274 aa13.76□□□□□ -0.21
PRKCSH-203ENST00000586486 OR8U1Q8NH10 309 aa13.76□□□□□ -0.21
PRKCSH-203ENST00000586486 BORCS5Q969J3 196 aa13.76□□□□□ -0.21
PRKCSH-203ENST00000586486 PRRT1Q99946 306 aa13.76□□□□□ -0.21
PRKCSH-203ENST00000586486 PIPOXQ9P0Z9 390 aa13.76□□□□□ -0.21
PRKCSH-203ENST00000586486 DPM3Q9P2X0 92 aa13.76□□□□□ -0.21
PRKCSH-203ENST00000586486 CDC42EP3Q9UKI2 254 aa13.76□□□□□ -0.21
PRKCSH-203ENST00000586486 SONP18583 2426 aaKnown RBP13.76□□□□□ -0.21
PRKCSH-203ENST00000586486 IGKV1D-13A0A0B4J2D9 117 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 A0A1W2PRD5 423 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 A0A1W2PRF3 423 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 A0A1W2PRM7 423 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 NAP1L6A6NFF2 107 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 LEUTXA8MZ59 168 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 LY6LH3BQJ8 138 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 IGKV1-13P0DP09 117 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 CEACAM3P40198 252 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 LDLRAD2Q5SZI1 272 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 AADACL3Q5VUY0 350 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 FAM71F2Q6NXP2 309 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 LYG1Q8N1E2 194 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 ST6GALNAC6Q969X2 333 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 AJUBAQ96IF1 538 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 FXYD6Q9H0Q3 95 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 GAB2Q9UQC2 676 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 NSD1Q96L73 2696 aaPredicted RBP13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 NAV3Q8IVL0 2385 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 SAA2-SAA4A0A096LPE2 208 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 RAB29O14966 203 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 PLA2G10O15496 165 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 SLC22A5O76082 557 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 SAA2P0DJI9 122 aaPredicted RBP13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 EPHA1P21709 976 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 IFITM3Q01628 133 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 MSMO1Q15800 293 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 IL17RELQ6ZVW7 336 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 LHFPL4Q7Z7J7 247 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 OR51S1Q8NGJ8 323 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 TERB2Q8NHR7 220 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 MALSU1Q96EH3 234 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 ABHD14BQ96IU4 210 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 OR2D2Q9H210 308 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 MCUBQ9NWR8 336 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 SCP2D1Q9UJQ7 156 aa13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 RBM7Q9Y580 266 aaKnown RBP13.75□□□□□ -0.21
PRKCSH-203ENST00000586486 OR5H14A6NHG9 310 aa13.74□□□□□ -0.21
PRKCSH-203ENST00000586486 CENPXA8MT69 81 aa13.74□□□□□ -0.21
PRKCSH-203ENST00000586486 OOSP1A8MZH6 123 aa13.74□□□□□ -0.21
PRKCSH-203ENST00000586486 SRP14P37108 136 aaKnown RBP13.74□□□□□ -0.21
PRKCSH-203ENST00000586486 UCP3P55916 312 aa13.74□□□□□ -0.21
PRKCSH-203ENST00000586486 FXYD4P59646 89 aa13.74□□□□□ -0.21
PRKCSH-203ENST00000586486 ASAH1Q13510 395 aa13.74□□□□□ -0.21
PRKCSH-203ENST00000586486 SCGB2B2Q4G0G5 96 aa13.74□□□□□ -0.21
PRKCSH-203ENST00000586486 TPTE2P1Q5T6R2 138 aa13.74□□□□□ -0.21
PRKCSH-203ENST00000586486 ZNF833PQ6ZTB9 187 aa13.74□□□□□ -0.21
PRKCSH-203ENST00000586486 ZNF645Q8N7E2 425 aa13.74□□□□□ -0.21
PRKCSH-203ENST00000586486 ZNF251Q9BRH9 671 aa13.74□□□□□ -0.21
PRKCSH-203ENST00000586486 MS4A7Q9GZW8 240 aaPredicted RBP13.74□□□□□ -0.21
PRKCSH-203ENST00000586486 PALMDQ9NP74 551 aa13.74□□□□□ -0.21
PRKCSH-203ENST00000586486 ZNF221Q9UK13 617 aa13.74□□□□□ -0.21
PRKCSH-203ENST00000586486 LYRM1O43325 122 aa13.73□□□□□ -0.21
PRKCSH-203ENST00000586486 TXNL1O43396 289 aa13.73□□□□□ -0.21
PRKCSH-203ENST00000586486 ECI1P42126 302 aa13.73□□□□□ -0.21
PRKCSH-203ENST00000586486 GPR12P47775 334 aa13.73□□□□□ -0.21
PRKCSH-203ENST00000586486 ZNF816Q0VGE8 651 aaPredicted RBP13.73□□□□□ -0.21
PRKCSH-203ENST00000586486 TUSC1Q2TAM9 212 aa13.73□□□□□ -0.21
PRKCSH-203ENST00000586486 IDO2Q6ZQW0 420 aa13.73□□□□□ -0.21
PRKCSH-203ENST00000586486 MRGPRFQ96AM1 343 aa13.73□□□□□ -0.21
PRKCSH-203ENST00000586486 RNF150Q9ULK6 438 aa13.73□□□□□ -0.21
PRKCSH-203ENST00000586486 TBC1D24Q9ULP9 559 aa13.73□□□□□ -0.21
PRKCSH-203ENST00000586486 ANK3Q12955 4377 aaKnown RBP13.73□□□□□ -0.21
PRKCSH-203ENST00000586486 A0A0U1RQK1 487 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 LINC00854A0A1B0GVQ3 168 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 HSD17B6O14756 317 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 IGLV2-14P01704 120 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 BTCP35070 178 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 SCGB2A2Q13296 93 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 LPCAT3Q6P1A2 487 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 C16orf87Q6PH81 154 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 Q71RC1 249 aaPredicted RBP13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 OR13C8Q8NGS7 320 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 SECTM1Q8WVN6 248 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 C17orf50Q8WW18 174 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 TOMM40LQ969M1 308 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 RPEQ96AT9 228 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 S1PR3Q99500 378 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 BEX2Q9BXY8 128 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 SLC5A7Q9GZV3 580 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 SDHAF2Q9NX18 166 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 INAFM1C9JVW0 142 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 PROP1O75360 226 aa13.72□□□□□ -0.21
PRKCSH-203ENST00000586486 SURF2Q15527 256 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms