RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 TCTEX1D1Q8N7M0 179 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 ZFP41Q8N8Y5 198 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 GHSRQ92847 366 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 FLYWCH2Q96CP2 140 aaKnown RBP9.07□□□□□ -0.96
BRCA1-225ENST00000586385 Q96MT0 163 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 SPATA25Q9BR10 227 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 SELENOIQ9C0D9 397 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 RETNQ9HD89 108 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 CHCHD3Q9NX63 227 aaKnown RBP9.07□□□□□ -0.96
BRCA1-225ENST00000586385 CNOT2Q9NZN8 540 aaKnown RBP9.07□□□□□ -0.96
BRCA1-225ENST00000586385 NKX1-2Q9UD57 310 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-225ENST00000586385 CLEC2DQ9UHP7 191 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 ADAM30Q9UKF2 790 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 STUB1Q9UNE7 303 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 RPL36Q9Y3U8 105 aaKnown RBP9.07□□□□□ -0.96
BRCA1-225ENST00000586385 ORC6Q9Y5N6 252 aa9.07□□□□□ -0.96
BRCA1-225ENST00000586385 A0A1W2PPK0 400 aa9.06□□□□□ -0.96
BRCA1-225ENST00000586385 PDCD6O75340 191 aa9.06□□□□□ -0.96
BRCA1-225ENST00000586385 BAG2O95816 211 aa9.06□□□□□ -0.96
BRCA1-225ENST00000586385 GLAP06280 429 aa9.06□□□□□ -0.96
BRCA1-225ENST00000586385 ARSBP15848 533 aa9.06□□□□□ -0.96
BRCA1-225ENST00000586385 LINC00205P59089 165 aa9.06□□□□□ -0.96
BRCA1-225ENST00000586385 TPPP2P59282 170 aa9.06□□□□□ -0.96
BRCA1-225ENST00000586385 Q499Y3 187 aa9.06□□□□□ -0.96
BRCA1-225ENST00000586385 AKIRIN2Q53H80 203 aa9.06□□□□□ -0.96
BRCA1-225ENST00000586385 ACTBL2Q562R1 376 aa9.06□□□□□ -0.96
BRCA1-225ENST00000586385 FAM71F2Q6NXP2 309 aa9.06□□□□□ -0.96
BRCA1-225ENST00000586385 UNQ5815/PRO19632Q6UWF5 114 aa9.06□□□□□ -0.96
BRCA1-225ENST00000586385 JAGN1Q8N5M9 183 aa9.06□□□□□ -0.96
BRCA1-225ENST00000586385 LFNGQ8NES3 379 aa9.06□□□□□ -0.96
BRCA1-225ENST00000586385 SULT4A1Q9BR01 284 aa9.06□□□□□ -0.96
BRCA1-225ENST00000586385 AGMATQ9BSE5 352 aa9.06□□□□□ -0.96
BRCA1-225ENST00000586385 BABAM2Q9NXR7 383 aa9.06□□□□□ -0.96
BRCA1-225ENST00000586385 TNCP24821 2201 aa9.05□□□□□ -0.96
BRCA1-225ENST00000586385 LOC100130705A0A1B0GUX0 176 aa9.05□□□□□ -0.96
BRCA1-225ENST00000586385 ARPC1BO15143 372 aaKnown RBP9.05□□□□□ -0.96
BRCA1-225ENST00000586385 KLF5Q13887 457 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-225ENST00000586385 AWAT2Q6E213 333 aa9.05□□□□□ -0.96
BRCA1-225ENST00000586385 PYHIN1Q6K0P9 492 aa9.05□□□□□ -0.96
BRCA1-225ENST00000586385 LINC00322Q6ZN03 302 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-225ENST00000586385 SGPP2Q8IWX5 399 aa9.05□□□□□ -0.96
BRCA1-225ENST00000586385 OR2AK2Q8NG84 335 aa9.05□□□□□ -0.96
BRCA1-225ENST00000586385 OR5AN1Q8NGI8 311 aa9.05□□□□□ -0.96
BRCA1-225ENST00000586385 FAM46BQ96A09 425 aa9.05□□□□□ -0.96
BRCA1-225ENST00000586385 CLCC1Q96S66 551 aa9.05□□□□□ -0.96
BRCA1-225ENST00000586385 RSRP1Q9BUV0 290 aa9.05□□□□□ -0.96
BRCA1-225ENST00000586385 KCNIP1Q9NZI2 227 aa9.05□□□□□ -0.96
BRCA1-225ENST00000586385 ERGIC3Q9Y282 383 aa9.05□□□□□ -0.96
BRCA1-225ENST00000586385 ALMS1Q8TCU4 4167 aa9.05□□□□□ -0.96
BRCA1-225ENST00000586385 IZUMO1RA6ND01 250 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 OR5H14A6NHG9 310 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 CRTAPO75718 401 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-225ENST00000586385 RGS11O94810 467 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 CA2P00918 260 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 TRGV3P03979 118 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 DCKP27707 260 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 DEFA5Q01523 94 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 PSG5Q15238 335 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 YIF1BQ5BJH7 314 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 ZNF880Q6PDB4 577 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 ZNF562Q6V9R5 426 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 ANKRD13BQ86YJ7 626 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 SVOPQ8N4V2 548 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 ABHD5Q8WTS1 349 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 GALMQ96C23 342 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 ABHD14BQ96IU4 210 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 DERL3Q96Q80 235 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 ELOVL1Q9BW60 279 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 SLC23A1Q9UHI7 598 aa9.04□□□□□ -0.96
BRCA1-225ENST00000586385 ANKRD34BA5PLL1 514 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 RBMXL2O75526 392 aaKnown RBP9.03□□□□□ -0.96
BRCA1-225ENST00000586385 NAPSAO96009 420 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 TRBV12-3P01733 135 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 IGKV1-16P04430 117 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 CSN3P07498 182 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 MECP2P51608 486 aaKnown RBP9.03□□□□□ -0.96
BRCA1-225ENST00000586385 SYNJ2BPP57105 145 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 TMEM267Q0VDI3 215 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-225ENST00000586385 PLGLAQ15195 96 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 OR10K2Q6IF99 312 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 TMPRSS11AQ6ZMR5 421 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 C6orf201Q7Z4U5 140 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 CDH26Q8IXH8 852 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 FAM110AQ9BQ89 295 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 FAAP24Q9BTP7 215 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 HIPK2Q9H2X6 1198 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 KCNK15Q9H427 330 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 SLA2Q9H6Q3 261 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 FAM53CQ9NYF3 392 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 PIPOXQ9P0Z9 390 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 METTL1Q9UBP6 276 aaKnown RBP9.03□□□□□ -0.96
BRCA1-225ENST00000586385 CKLFQ9UBR5 152 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 DIMT1Q9UNQ2 313 aaKnown RBP9.03□□□□□ -0.96
BRCA1-225ENST00000586385 WASHC3Q9Y3C0 194 aa9.03□□□□□ -0.96
BRCA1-225ENST00000586385 RAB29O14966 203 aa9.02□□□□□ -0.97
BRCA1-225ENST00000586385 CIB2O75838 187 aa9.02□□□□□ -0.97
BRCA1-225ENST00000586385 RBBP9O75884 186 aa9.02□□□□□ -0.97
BRCA1-225ENST00000586385 TFAP2AP05549 437 aa9.02□□□□□ -0.97
BRCA1-225ENST00000586385 GSTP1P09211 210 aaKnown RBP9.02□□□□□ -0.97
BRCA1-225ENST00000586385 ZP3P21754 424 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms