RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 TOMM40LQ969M1 308 aa10.41□□□□□ -0.74
VMP1-202ENST00000585847 ZNF714Q96N38 554 aa10.41□□□□□ -0.74
VMP1-202ENST00000585847 NEURL2Q9BR09 285 aa10.41□□□□□ -0.74
VMP1-202ENST00000585847 SLC5A7Q9GZV3 580 aa10.41□□□□□ -0.74
VMP1-202ENST00000585847 NAA60Q9H7X0 242 aa10.41□□□□□ -0.74
VMP1-202ENST00000585847 RAB18Q9NP72 206 aa10.41□□□□□ -0.74
VMP1-202ENST00000585847 OR2S2Q9NQN1 319 aa10.41□□□□□ -0.74
VMP1-202ENST00000585847 LIN7CQ9NUP9 197 aaKnown RBP10.41□□□□□ -0.74
VMP1-202ENST00000585847 GNG12Q9UBI6 72 aa10.41□□□□□ -0.74
VMP1-202ENST00000585847 ZNF221Q9UK13 617 aa10.41□□□□□ -0.74
VMP1-202ENST00000585847 FLVCR2Q9UPI3 526 aa10.41□□□□□ -0.74
VMP1-202ENST00000585847 GAB2Q9UQC2 676 aa10.41□□□□□ -0.74
VMP1-202ENST00000585847 TEX13DA0A0J9YY54 714 aaPredicted RBP10.4□□□□□ -0.74
VMP1-202ENST00000585847 A8MXK9 166 aa10.4□□□□□ -0.74
VMP1-202ENST00000585847 ATG12O94817 140 aa10.4□□□□□ -0.74
VMP1-202ENST00000585847 GIPP09681 153 aaPredicted RBP10.4□□□□□ -0.74
VMP1-202ENST00000585847 RPA2P15927 270 aa10.4□□□□□ -0.74
VMP1-202ENST00000585847 AKR1C4P17516 323 aa10.4□□□□□ -0.74
VMP1-202ENST00000585847 NFYAP23511 347 aaPredicted RBP10.4□□□□□ -0.74
VMP1-202ENST00000585847 VAMP1P23763 118 aa10.4□□□□□ -0.74
VMP1-202ENST00000585847 CD34P28906 385 aa10.4□□□□□ -0.74
VMP1-202ENST00000585847 PIGPP57054 158 aa10.4□□□□□ -0.74
VMP1-202ENST00000585847 RAP2BP61225 183 aa10.4□□□□□ -0.74
VMP1-202ENST00000585847 CYCSP99999 105 aaKnown RBP10.4□□□□□ -0.74
VMP1-202ENST00000585847 PAX2Q02962 417 aa10.4□□□□□ -0.74
VMP1-202ENST00000585847 CATR1Q13166 79 aa10.4□□□□□ -0.74
VMP1-202ENST00000585847 PPP1R1AQ13522 171 aa10.4□□□□□ -0.74
VMP1-202ENST00000585847 WDR25Q64LD2 544 aaPredicted RBP10.4□□□□□ -0.74
VMP1-202ENST00000585847 FAM71F2Q6NXP2 309 aa10.4□□□□□ -0.74
VMP1-202ENST00000585847 HEPN1Q6WQI6 88 aa10.4□□□□□ -0.74
VMP1-202ENST00000585847 LDLRAD3Q86YD5 345 aa10.4□□□□□ -0.74
VMP1-202ENST00000585847 ZNF645Q8N7E2 425 aa10.4□□□□□ -0.74
VMP1-202ENST00000585847 SPATA3Q8NHX4 192 aa10.4□□□□□ -0.74
VMP1-202ENST00000585847 RTBDNQ9BSG5 229 aaPredicted RBP10.4□□□□□ -0.74
VMP1-202ENST00000585847 ZFP57Q9NU63 452 aa10.4□□□□□ -0.74
VMP1-202ENST00000585847 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.4□□□□□ -0.741e-5■■■■□ 21.5
VMP1-202ENST00000585847 INAFM1C9JVW0 142 aa10.39□□□□□ -0.75
VMP1-202ENST00000585847 H0Y980 276 aa10.39□□□□□ -0.75
VMP1-202ENST00000585847 DVL1O14640 695 aa10.39□□□□□ -0.75
VMP1-202ENST00000585847 PHF1O43189 567 aaPredicted RBP10.39□□□□□ -0.75
VMP1-202ENST00000585847 VSIG10L2P0DP72 767 aa10.39□□□□□ -0.75
VMP1-202ENST00000585847 CEACAM6P40199 344 aa10.39□□□□□ -0.75
VMP1-202ENST00000585847 FXYD4P59646 89 aa10.39□□□□□ -0.75
VMP1-202ENST00000585847 FGL1Q08830 312 aa10.39□□□□□ -0.75
VMP1-202ENST00000585847 ESCO2Q56NI9 601 aa10.39□□□□□ -0.75
VMP1-202ENST00000585847 ZNF66Q6ZN08 573 aa10.39□□□□□ -0.75
VMP1-202ENST00000585847 C1orf122Q6ZSJ8 110 aa10.39□□□□□ -0.75
VMP1-202ENST00000585847 CD300LFQ8TDQ1 290 aa10.39□□□□□ -0.75
VMP1-202ENST00000585847 MSI2Q96DH6 328 aaKnown RBP10.39□□□□□ -0.75
VMP1-202ENST00000585847 DCTN5Q9BTE1 182 aa10.39□□□□□ -0.75
VMP1-202ENST00000585847 GFOD1Q9NXC2 390 aa10.39□□□□□ -0.75
VMP1-202ENST00000585847 IDI2-AS1Q9NZ38 188 aa10.39□□□□□ -0.75
VMP1-202ENST00000585847 RPUSD1Q9UJJ7 312 aaKnown RBP10.39□□□□□ -0.75
VMP1-202ENST00000585847 POLR3KQ9Y2Y1 108 aaPredicted RBP10.39□□□□□ -0.75
VMP1-202ENST00000585847 RBM7Q9Y580 266 aaKnown RBP10.39□□□□□ -0.75
VMP1-202ENST00000585847 HIVEP2P31629 2446 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 A0A087X0M5 115 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 A0A1B0GX30 115 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 DBX1A6NMT0 343 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 C22orf46C9J442 243 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 MPPED1O15442 326 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 LIPFP07098 398 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 HNRNPCP07910 306 aaKnown RBP eCLIP10.38□□□□□ -0.75
VMP1-202ENST00000585847 GNRHRP30968 328 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 SSTR5P35346 364 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 TAGLNQ01995 201 aaKnown RBP10.38□□□□□ -0.75
VMP1-202ENST00000585847 LGI3Q8N145 548 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 PRR18Q8N4B5 295 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 KIR3DL3Q8N743 410 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 OR5M8Q8NGP6 311 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 OR1L1Q8NH94 360 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 SECTM1Q8WVN6 248 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 TMEM230Q96A57 120 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 ADTRPQ96IZ2 230 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 HSD17B10Q99714 261 aaKnown RBP10.38□□□□□ -0.75
VMP1-202ENST00000585847 SEC22CQ9BRL7 303 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 MMP26Q9NRE1 261 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 PIPOXQ9P0Z9 390 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 CACFD1Q9UGQ2 172 aa10.38□□□□□ -0.75
VMP1-202ENST00000585847 COL6A5A8TX70 2615 aa10.37□□□□□ -0.75
VMP1-202ENST00000585847 M0R1W7 72 aa10.37□□□□□ -0.75
VMP1-202ENST00000585847 OR2A4O95047 310 aa10.37□□□□□ -0.75
VMP1-202ENST00000585847 IFNA21P01568 189 aa10.37□□□□□ -0.75
VMP1-202ENST00000585847 PET100P0DJ07 73 aa10.37□□□□□ -0.75
VMP1-202ENST00000585847 KIR2DS2P43631 304 aa10.37□□□□□ -0.75
VMP1-202ENST00000585847 LCN2P80188 198 aa10.37□□□□□ -0.75
VMP1-202ENST00000585847 SRSF4Q08170 494 aaKnown RBP10.37□□□□□ -0.75
VMP1-202ENST00000585847 LINC00311Q8N616 119 aa10.37□□□□□ -0.75
VMP1-202ENST00000585847 OR2A7Q96R45 310 aa10.37□□□□□ -0.75
VMP1-202ENST00000585847 SPIN2AQ99865 258 aa10.37□□□□□ -0.75
VMP1-202ENST00000585847 SPIN2BQ9BPZ2 258 aa10.37□□□□□ -0.75
VMP1-202ENST00000585847 SSBP3Q9BWW4 388 aaPredicted RBP10.37□□□□□ -0.75
VMP1-202ENST00000585847 ZNF436Q9C0F3 470 aaPredicted RBP10.37□□□□□ -0.75
VMP1-202ENST00000585847 TMEM222Q9H0R3 208 aa10.37□□□□□ -0.75
VMP1-202ENST00000585847 RANBP3Q9H6Z4 567 aaPredicted RBP10.37□□□□□ -0.75
VMP1-202ENST00000585847 LPAR2Q9HBW0 351 aa10.37□□□□□ -0.75
VMP1-202ENST00000585847 OR1A1Q9P1Q5 309 aa10.37□□□□□ -0.75
VMP1-202ENST00000585847 MGAT4CQ9UBM8 478 aa10.37□□□□□ -0.75
VMP1-202ENST00000585847 TMED3Q9Y3Q3 217 aa10.37□□□□□ -0.75
VMP1-202ENST00000585847 TLN2Q9Y4G6 2542 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms