RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 CYYR1Q96J86 154 aa9.78□□□□□ -0.84
SS18-225ENST00000585121 CMSS1Q9BQ75 279 aaKnown RBP9.78□□□□□ -0.84
SS18-225ENST00000585121 ZNF251Q9BRH9 671 aa9.78□□□□□ -0.84
SS18-225ENST00000585121 PECRQ9BY49 303 aa9.78□□□□□ -0.84
SS18-225ENST00000585121 GHITMQ9H3K2 345 aa9.78□□□□□ -0.84
SS18-225ENST00000585121 C12orf4Q9NQ89 552 aa9.78□□□□□ -0.84
SS18-225ENST00000585121 PLSCR3Q9NRY6 295 aa9.78□□□□□ -0.84
SS18-225ENST00000585121 NDUFB11Q9NX14 153 aa9.78□□□□□ -0.84
SS18-225ENST00000585121 PRKDCP78527 4128 aaKnown RBP9.78□□□□□ -0.84
SS18-225ENST00000585121 TRDV1A0A1B0GX56 115 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 H3BMQ9 156 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 RAB29O14966 203 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 GALP22466 123 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 ZBTB25P24278 435 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 GADD45AP24522 165 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 SLC6A1P30531 599 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 TMEM50BP56557 158 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 RPL23AP62750 156 aaKnown RBP9.77□□□□□ -0.84
SS18-225ENST00000585121 HLA-DRB3P79483 266 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 SSX1Q16384 188 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 CTF1Q16619 201 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 PNLIPRP3Q17RR3 467 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 OXLD1Q5BKU9 147 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 KPRPQ5T749 579 aaPredicted RBP9.77□□□□□ -0.84
SS18-225ENST00000585121 FAM71F2Q6NXP2 309 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 TEX38Q6PEX7 206 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 ZNF833PQ6ZTB9 187 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 EDARADDQ8WWZ3 215 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 PHF21AQ96BD5 680 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 NABP2Q9BQ15 211 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 MRPL20Q9BYC9 149 aaKnown RBP9.77□□□□□ -0.84
SS18-225ENST00000585121 NAA50Q9GZZ1 169 aaKnown RBP9.77□□□□□ -0.84
SS18-225ENST00000585121 PTTG2Q9NZH5 202 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 KIAA1456Q9P272 454 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 SLC23A1Q9UHI7 598 aa9.77□□□□□ -0.84
SS18-225ENST00000585121 SAA2-SAA4A0A096LPE2 208 aa9.77□□□□□ -0.85
SS18-225ENST00000585121 TMEM272A0A1B0GTI8 110 aa9.77□□□□□ -0.85
SS18-225ENST00000585121 ITGB1BP1O14713 200 aa9.77□□□□□ -0.85
SS18-225ENST00000585121 ST8SIA5O15466 376 aa9.77□□□□□ -0.85
SS18-225ENST00000585121 AIREO43918 545 aa9.77□□□□□ -0.85
SS18-225ENST00000585121 CD3GP09693 182 aa9.77□□□□□ -0.85
SS18-225ENST00000585121 SAA2P0DJI9 122 aaPredicted RBP9.77□□□□□ -0.85
SS18-225ENST00000585121 OR5H8P0DN80 308 aa9.77□□□□□ -0.85
SS18-225ENST00000585121 RAB3BP20337 219 aa9.77□□□□□ -0.85
SS18-225ENST00000585121 VDAC1P21796 283 aa9.77□□□□□ -0.85
SS18-225ENST00000585121 CEACAM6P40199 344 aa9.77□□□□□ -0.85
SS18-225ENST00000585121 OR3A3P47888 321 aa9.77□□□□□ -0.85
SS18-225ENST00000585121 F2RL1P55085 397 aa9.77□□□□□ -0.85
SS18-225ENST00000585121 CXorf66Q5JRM2 361 aaPredicted RBP9.77□□□□□ -0.85
SS18-225ENST00000585121 CD200R1LQ6Q8B3 271 aa9.77□□□□□ -0.85
SS18-225ENST00000585121 ODF3L1Q8IXM7 274 aa9.77□□□□□ -0.85
SS18-225ENST00000585121 FAM71E2Q8N5Q1 922 aa9.77□□□□□ -0.85
SS18-225ENST00000585121 RAB3CQ96E17 227 aa9.77□□□□□ -0.85
SS18-225ENST00000585121 RCC1LQ96I51 464 aaKnown RBP9.77□□□□□ -0.85
SS18-225ENST00000585121 HDHD3Q9BSH5 251 aaPredicted RBP9.77□□□□□ -0.85
SS18-225ENST00000585121 Q9N2K0 584 aa9.77□□□□□ -0.85
SS18-225ENST00000585121 TGP01266 2768 aa9.76□□□□□ -0.85
SS18-225ENST00000585121 PLXNB1O43157 2135 aa9.76□□□□□ -0.85
SS18-225ENST00000585121 METTL21EPA6NDL7 271 aa9.76□□□□□ -0.85
SS18-225ENST00000585121 LINC01548A6NM66 108 aa9.76□□□□□ -0.85
SS18-225ENST00000585121 IFITM5A6NNB3 132 aa9.76□□□□□ -0.85
SS18-225ENST00000585121 FOXI3A8MTJ6 420 aaPredicted RBP9.76□□□□□ -0.85
SS18-225ENST00000585121 LDLRAD4O15165 306 aa9.76□□□□□ -0.85
SS18-225ENST00000585121 DUS4LO95620 317 aaKnown RBP9.76□□□□□ -0.85
SS18-225ENST00000585121 IGLL1P15814 213 aa9.76□□□□□ -0.85
SS18-225ENST00000585121 ACTBP60709 375 aa9.76□□□□□ -0.85
SS18-225ENST00000585121 C22orf42Q6IC83 251 aa9.76□□□□□ -0.85
SS18-225ENST00000585121 CHCHD6Q9BRQ6 235 aa9.76□□□□□ -0.85
SS18-225ENST00000585121 GPR61Q9BZJ8 451 aa9.76□□□□□ -0.85
SS18-225ENST00000585121 IFI27L2Q9H2X8 130 aa9.76□□□□□ -0.85
SS18-225ENST00000585121 NECAP2Q9NVZ3 263 aa9.76□□□□□ -0.85
SS18-225ENST00000585121 ZNF107Q9UII5 783 aaPredicted RBP9.76□□□□□ -0.85
SS18-225ENST00000585121 TRDCB7Z8K6 153 aa9.75□□□□□ -0.85
SS18-225ENST00000585121 ELANEP08246 267 aa9.75□□□□□ -0.85
SS18-225ENST00000585121 SLC2A2P11168 524 aaPredicted RBP9.75□□□□□ -0.85
SS18-225ENST00000585121 RAB6AP20340 208 aa9.75□□□□□ -0.85
SS18-225ENST00000585121 MC5RP33032 325 aa9.75□□□□□ -0.85
SS18-225ENST00000585121 OR10A3P58181 314 aa9.75□□□□□ -0.85
SS18-225ENST00000585121 FOXE3Q13461 319 aa9.75□□□□□ -0.85
SS18-225ENST00000585121 KLHL30-AS1Q8NEE0 82 aa9.75□□□□□ -0.85
SS18-225ENST00000585121 ZNF221Q9UK13 617 aa9.75□□□□□ -0.85
SS18-225ENST00000585121 STUB1Q9UNE7 303 aa9.75□□□□□ -0.85
SS18-225ENST00000585121 SSR3Q9UNL2 185 aa9.75□□□□□ -0.85
SS18-225ENST00000585121 OR5H14A6NHG9 310 aa9.74□□□□□ -0.85
SS18-225ENST00000585121 H7C2Y5 167 aa9.74□□□□□ -0.85
SS18-225ENST00000585121 NBR2O15453 112 aa9.74□□□□□ -0.85
SS18-225ENST00000585121 GSTP1P09211 210 aaKnown RBP9.74□□□□□ -0.85
SS18-225ENST00000585121 SCTP09683 121 aa9.74□□□□□ -0.85
SS18-225ENST00000585121 FGF9P31371 208 aaPredicted RBP9.74□□□□□ -0.85
SS18-225ENST00000585121 TALDO1P37837 337 aa9.74□□□□□ -0.85
SS18-225ENST00000585121 MYCNOSP40205 109 aa9.74□□□□□ -0.85
SS18-225ENST00000585121 SERPINB10P48595 397 aa9.74□□□□□ -0.85
SS18-225ENST00000585121 KIR2DS1Q14954 304 aa9.74□□□□□ -0.85
SS18-225ENST00000585121 ARL6IP1Q15041 203 aa9.74□□□□□ -0.85
SS18-225ENST00000585121 PLAC9Q5JTB6 97 aa9.74□□□□□ -0.85
SS18-225ENST00000585121 ZNF695Q8IW36 515 aa9.74□□□□□ -0.85
SS18-225ENST00000585121 OR4A4PQ8NGN8 299 aa9.74□□□□□ -0.85
SS18-225ENST00000585121 OR10R2Q8NGX6 335 aa9.74□□□□□ -0.85
SS18-225ENST00000585121 ABHD14BQ96IU4 210 aa9.74□□□□□ -0.85
SS18-225ENST00000585121 HSPB9Q9BQS6 159 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms