RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 PRR20CP86479 221 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 PRR20DP86480 221 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 PRR20BP86481 221 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 PRR20AP86496 221 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 EWSR1Q01844 656 aaKnown RBP eCLIP8.32□□□□□ -1.08
CASC3-208ENST00000583649 TMED1Q13445 227 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 DEFB135Q30KP9 77 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 TP53I3Q53FA7 332 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 ZNF57Q68EA5 555 aaPredicted RBP8.32□□□□□ -1.08
CASC3-208ENST00000583649 SLC38A6Q8IZM9 456 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 DEFB107AQ8IZN7 70 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 KIR2DL5AQ8N109 375 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 ARHGAP24Q8N264 748 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 OR51A2Q8NGJ7 313 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 OR10K1Q8NGX5 313 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 OR10AC1Q8NH08 325 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 KIR2DL5BQ8NHK3 375 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 GALMQ96C23 342 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 WDR89Q96FK6 387 aaPredicted RBP8.32□□□□□ -1.08
CASC3-208ENST00000583649 YPEL2Q96QA6 119 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 IL36GQ9NZH8 169 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 FBXL17Q9UF56 701 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 MUC4Q99102 2169 aa8.32□□□□□ -1.08
CASC3-208ENST00000583649 A0A1B0GVY2 172 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 TCRBV5S2A0A599 114 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 GABRPO00591 440 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 CPEP16870 476 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 LY6G6FQ5SQ64 297 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 LPCAT4Q643R3 524 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 GLT8D1Q68CQ7 371 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 FDX2Q6P4F2 183 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 BCDIN3DQ7Z5W3 292 aaKnown RBP8.31□□□□□ -1.08
CASC3-208ENST00000583649 PARP16Q8N5Y8 322 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 GVQW1Q8N7I0 195 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 OR4K15Q8NH41 348 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 OR1L1Q8NH94 360 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 IL4I1Q96RQ9 567 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 PHB2Q99623 299 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 SULT4A1Q9BR01 284 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 C6orf62Q9GZU0 229 aaPredicted RBP8.31□□□□□ -1.08
CASC3-208ENST00000583649 TAF9BQ9HBM6 251 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 ABRACLQ9P1F3 81 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 GAB2Q9UQC2 676 aa8.31□□□□□ -1.08
CASC3-208ENST00000583649 C2orf70A6NJV1 201 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 FAM223BA6NKX1 122 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 C11orf94C9JXX5 98 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 SHOXO15266 292 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 SNX3O60493 162 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 CD2P06729 351 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 T-ENOLP0DO92 83 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 SERPINA2P20848 420 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 PRKACGP22612 351 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 OR3A3P47888 321 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 ATP5G2Q06055 141 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 TRIM25Q14258 630 aaKnown RBP8.3□□□□□ -1.08
CASC3-208ENST00000583649 PSG5Q15238 335 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 SOHLH1Q5JUK2 328 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 ASCL4Q6XD76 172 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 RBPMS2Q6ZRY4 209 aaKnown RBP8.3□□□□□ -1.08
CASC3-208ENST00000583649 NR2C2APQ86WQ0 139 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 FAM223AQ8IWN6 122 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 ODF3L1Q8IXM7 274 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 OR51A4Q8NGJ6 313 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 RIBC2Q9H4K1 309 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 ADAM30Q9UKF2 790 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 GMPPBQ9Y5P6 360 aa8.3□□□□□ -1.08
CASC3-208ENST00000583649 DAPL1A0PJW8 107 aa8.29□□□□□ -1.08
CASC3-208ENST00000583649 TMEM212A6NML5 194 aa8.29□□□□□ -1.08
CASC3-208ENST00000583649 IGLL5B9A064 214 aa8.29□□□□□ -1.08
CASC3-208ENST00000583649 H0YJW9 148 aa8.29□□□□□ -1.08
CASC3-208ENST00000583649 LGALS9O00182 355 aa8.29□□□□□ -1.08
CASC3-208ENST00000583649 MPPED1O15442 326 aa8.29□□□□□ -1.08
CASC3-208ENST00000583649 GGCTO75223 188 aaKnown RBP8.29□□□□□ -1.08
CASC3-208ENST00000583649 CDRT1O95170 752 aa8.29□□□□□ -1.08
CASC3-208ENST00000583649 TRBV12-3P01733 135 aa8.29□□□□□ -1.08
CASC3-208ENST00000583649 APOA2P02652 100 aa8.29□□□□□ -1.08
CASC3-208ENST00000583649 MAS1P04201 325 aa8.29□□□□□ -1.08
CASC3-208ENST00000583649 PPP1CCP36873 323 aaKnown RBP8.29□□□□□ -1.08
CASC3-208ENST00000583649 PPP3R1P63098 170 aa8.29□□□□□ -1.08
CASC3-208ENST00000583649 TM4SF20Q53R12 229 aa8.29□□□□□ -1.08
CASC3-208ENST00000583649 SLC25A30Q5SVS4 291 aa8.29□□□□□ -1.08
CASC3-208ENST00000583649 OR4A47Q6IF82 309 aa8.29□□□□□ -1.08
CASC3-208ENST00000583649 ADAD2Q8NCV1 583 aaKnown RBP8.29□□□□□ -1.08
CASC3-208ENST00000583649 OR52L2PQ8NGH6 319 aa8.29□□□□□ -1.08
CASC3-208ENST00000583649 OR1L6Q8NGR2 347 aa8.29□□□□□ -1.08
CASC3-208ENST00000583649 TAGLN3Q9UI15 199 aa8.29□□□□□ -1.08
CASC3-208ENST00000583649 TRAV25A0A0B4J276 109 aa8.28□□□□□ -1.08
CASC3-208ENST00000583649 B2RBV5 119 aa8.28□□□□□ -1.08
CASC3-208ENST00000583649 SLC16A6O15403 523 aa8.28□□□□□ -1.08
CASC3-208ENST00000583649 GPX5O75715 221 aa8.28□□□□□ -1.08
CASC3-208ENST00000583649 GLAP06280 429 aa8.28□□□□□ -1.08
CASC3-208ENST00000583649 GSTT2P0CG29 244 aa8.28□□□□□ -1.08
CASC3-208ENST00000583649 GSTT2BP0CG30 244 aa8.28□□□□□ -1.08
CASC3-208ENST00000583649 RCC1P18754 421 aaPredicted RBP8.28□□□□□ -1.08
CASC3-208ENST00000583649 CBLN1P23435 193 aa8.28□□□□□ -1.08
CASC3-208ENST00000583649 ZNF93P35789 620 aaPredicted RBP8.28□□□□□ -1.08
CASC3-208ENST00000583649 CAPGP40121 348 aa8.28□□□□□ -1.08
CASC3-208ENST00000583649 ADARB1P78563 741 aaKnown RBP8.28□□□□□ -1.08
CASC3-208ENST00000583649 MRPL28Q13084 256 aaKnown RBP8.28□□□□□ -1.08
CASC3-208ENST00000583649 CBX3Q13185 183 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms