RNA–Protein interactions for RNA: ENST00000581729.1

CTC1-209, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 3

Gene CTC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-209ENST00000581729 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.04□□□□□ -1.92
CTC1-209ENST00000581729 ZNF439Q8NDP4 499 aa3.04□□□□□ -1.92
CTC1-209ENST00000581729 OR5D18Q8NGL1 313 aa3.04□□□□□ -1.92
CTC1-209ENST00000581729 HAVCR2Q8TDQ0 301 aa3.04□□□□□ -1.92
CTC1-209ENST00000581729 FLYWCH2Q96CP2 140 aaKnown RBP3.04□□□□□ -1.92
CTC1-209ENST00000581729 YIPF6Q96EC8 236 aa3.04□□□□□ -1.92
CTC1-209ENST00000581729 TSSK6Q9BXA6 273 aa3.04□□□□□ -1.92
CTC1-209ENST00000581729 SLIRPQ9GZT3 109 aaKnown RBP3.04□□□□□ -1.92
CTC1-209ENST00000581729 CCDC90BQ9GZT6 254 aa3.04□□□□□ -1.92
CTC1-209ENST00000581729 COMMD4Q9H0A8 199 aa3.04□□□□□ -1.92
CTC1-209ENST00000581729 GABARAPL1Q9H0R8 117 aa3.04□□□□□ -1.92
CTC1-209ENST00000581729 OR51V1Q9H2C8 321 aa3.04□□□□□ -1.92
CTC1-209ENST00000581729 FBXL15Q9H469 300 aa3.04□□□□□ -1.92
CTC1-209ENST00000581729 LINC00574Q9H8X3 128 aa3.04□□□□□ -1.92
CTC1-209ENST00000581729 SEBOXQ9HB31 216 aaPredicted RBP3.04□□□□□ -1.92
CTC1-209ENST00000581729 EXOSC4Q9NPD3 245 aaKnown RBP3.04□□□□□ -1.92
CTC1-209ENST00000581729 FAM118AQ9NWS6 357 aa3.04□□□□□ -1.92
CTC1-209ENST00000581729 CNOT2Q9NZN8 540 aaKnown RBP3.04□□□□□ -1.92
CTC1-209ENST00000581729 NUFIP1Q9UHK0 495 aaKnown RBP3.04□□□□□ -1.92
CTC1-209ENST00000581729 FOXA2Q9Y261 457 aaPredicted RBP3.04□□□□□ -1.92
CTC1-209ENST00000581729 RBMX2Q9Y388 322 aaKnown RBP3.04□□□□□ -1.92
CTC1-209ENST00000581729 NUBP2Q9Y5Y2 271 aa3.04□□□□□ -1.92
CTC1-209ENST00000581729 IGLV2-18A0A075B6J9 118 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 LOC102724200A0A096LPH7 203 aaPredicted RBP3.03□□□□□ -1.92
CTC1-209ENST00000581729 TRAV24A0A0B4J272 114 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 LOC100130705A0A1B0GUX0 176 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 HMX3A6NHT5 357 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 C15orf65H3BRN8 121 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 BMPR1BO00238 502 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 GNGT2O14610 69 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 GSTA4O15217 222 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 MITFO75030 526 aaPredicted RBP3.03□□□□□ -1.92
CTC1-209ENST00000581729 NDUFB8O95169 186 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 GADD45GO95257 159 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 GASTP01350 101 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 TRGV3P03979 118 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 CSN2P05814 226 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 HTR1AP08908 422 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 RBMY1CP0DJD4 496 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 INAFM2P0DMQ5 153 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 IL7P13232 177 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 ZNF44P15621 663 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 ATF4P18848 351 aaPredicted RBP3.03□□□□□ -1.92
CTC1-209ENST00000581729 PRKACBP22694 351 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 BMI1P35226 326 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 RCVRNP35243 200 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 POLR2IP36954 125 aaKnown RBP3.03□□□□□ -1.92
CTC1-209ENST00000581729 KIR2DS2P43631 304 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 AP2S1P53680 142 aaPredicted RBP3.03□□□□□ -1.92
CTC1-209ENST00000581729 CDC42P60953 191 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 CX3CL1P78423 397 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 IFITM3Q01628 133 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 TAGLNQ01995 201 aaKnown RBP3.03□□□□□ -1.92
CTC1-209ENST00000581729 TBCEQ15813 527 aaPredicted RBP3.03□□□□□ -1.92
CTC1-209ENST00000581729 C5orf64Q2M2E5 130 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 DEFB114Q30KQ6 69 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 SMUG1Q53HV7 270 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 SPIN3Q5JUX0 258 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 ATAD3CQ5T2N8 411 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 UBE2UQ5VVX9 321 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 STEAP3Q658P3 488 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 Q6ZR54 194 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 Q6ZSR3 168 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 SHFQ7M4L6 423 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 CYP4Z1Q86W10 505 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 TMEM61Q8N0U2 210 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 LINC00311Q8N616 119 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 LFNGQ8NES3 379 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 OR51T1Q8NGJ9 327 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 OR6F1Q8NGZ6 308 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 C2CD4CQ8TF44 421 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 OTULINQ96BN8 352 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 AIFM2Q9BRQ8 373 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 MRPL20Q9BYC9 149 aaKnown RBP3.03□□□□□ -1.92
CTC1-209ENST00000581729 NXF2Q9GZY0 626 aaKnown RBP3.03□□□□□ -1.92
CTC1-209ENST00000581729 DCSTAMPQ9H295 470 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 DUSP21Q9H596 190 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 GORASP2Q9H8Y8 452 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 ZC4H2Q9NQZ6 224 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 CMC2Q9NRP2 79 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 MBNL3Q9NUK0 354 aaKnown RBP3.03□□□□□ -1.92
CTC1-209ENST00000581729 SLC2A8Q9NY64 477 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 IL20Q9NYY1 176 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 GTF2A1LQ9UNN4 478 aa3.03□□□□□ -1.92
CTC1-209ENST00000581729 TMA7Q9Y2S6 64 aaKnown RBP3.03□□□□□ -1.92
CTC1-209ENST00000581729 TNXBP22105 4242 aa3.02□□□□□ -1.93
CTC1-209ENST00000581729 A0A075B6Q4 140 aa3.02□□□□□ -1.93
CTC1-209ENST00000581729 LOC105371267A0A1B0GV96 52 aa3.02□□□□□ -1.93
CTC1-209ENST00000581729 CCDC182A6NF36 153 aa3.02□□□□□ -1.93
CTC1-209ENST00000581729 SNTNA6NMZ2 147 aa3.02□□□□□ -1.93
CTC1-209ENST00000581729 NPIPB6E9PJ23 425 aa3.02□□□□□ -1.93
CTC1-209ENST00000581729 ARPC1BO15143 372 aaKnown RBP3.02□□□□□ -1.93
CTC1-209ENST00000581729 BET1O15155 118 aa3.02□□□□□ -1.93
CTC1-209ENST00000581729 SHOXO15266 292 aa3.02□□□□□ -1.93
CTC1-209ENST00000581729 NBR2O15453 112 aa3.02□□□□□ -1.93
CTC1-209ENST00000581729 AIREO43918 545 aa3.02□□□□□ -1.93
CTC1-209ENST00000581729 KDM4BO94953 1096 aa3.02□□□□□ -1.93
CTC1-209ENST00000581729 NDUFA3O95167 84 aa3.02□□□□□ -1.93
CTC1-209ENST00000581729 CST1P01037 141 aa3.02□□□□□ -1.93
CTC1-209ENST00000581729 HLA-AP01891 365 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms