RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 PLCH2O75038 1416 aa2□□□□□ -2.09
SMCHD1-205ENST00000581383 EEA1Q15075 1411 aa2□□□□□ -2.09
SMCHD1-205ENST00000581383 UHRF1BP1Q6BDS2 1440 aa2□□□□□ -2.09
SMCHD1-205ENST00000581383 KMT2EQ8IZD2 1858 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 CLUHO75153 1309 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 KDM5CP41229 1560 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 SAMD9LQ8IVG5 1584 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 CFAP74Q9C0B2 1584 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 H3BSA7 217 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 ATP6V1G2O95670 118 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 F8A1P23610 371 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 GRPRP30550 384 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 PSMB3P49720 205 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 ACTBP60709 375 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 ACTG1P63261 375 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 EXOC3L4Q17RC7 722 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 FAM229BQ4G0N7 80 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 SDIM1Q6ZPB5 146 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 SPATA24Q86W54 205 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 OR4K13Q8NH42 304 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 GPR119Q8TDV5 335 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 SMIM12Q96EX1 92 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 GPR22Q99680 433 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 TMEM208Q9BTX3 173 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 AICDAQ9GZX7 198 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 FIS1Q9Y3D6 152 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 GMEB1Q9Y692 573 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 ZNF518AQ6AHZ1 1483 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 CACNA1GO43497 2377 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 CLIP1P30622 1438 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 NCOA1Q15788 1441 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 FMN1Q68DA7 1419 aa1.99□□□□□ -2.09
SMCHD1-205ENST00000581383 LRRIQ1Q96JM4 1722 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 C17orf51A8MQB3 221 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 TOX3O15405 576 aaPredicted RBP1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 ADAP1O75689 374 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 ARL6IP5O75915 188 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 PET100P0DJ07 73 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 CPMP14384 443 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 CSRP1P21291 193 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 AKR1C2P52895 323 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 HTR4Q13639 388 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 FAM45BPQ6NSW5 357 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 TNFAIP8L1Q8WVP5 186 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 CAPZA3Q96KX2 299 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 TRNT1Q96Q11 434 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 GLS2Q9UI32 602 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 LINC00527Q9UJ94 153 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 DNAJC12Q9UKB3 198 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 MRPS16Q9Y3D3 137 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 CASKIN1Q8WXD9 1431 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 CAMSAP1Q5T5Y3 1602 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 PREX2Q70Z35 1606 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 MYO3AQ8NEV4 1616 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 BAHCC1Q9P281 2608 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 OTOFQ9HC10 1997 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 TIAM1Q13009 1591 aa1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 INO80Q9ULG1 1556 aaPredicted RBP1.98□□□□□ -2.09
SMCHD1-205ENST00000581383 ATP7AQ04656 1500 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 ITSN2Q9NZM3 1697 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 A2MP01023 1474 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 CAMSAP2Q08AD1 1489 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 CCDC18Q5T9S5 1454 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 MAGI2Q86UL8 1455 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 FYCO1Q9BQS8 1478 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 DAPL1A0PJW8 107 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 DEDDO75618 318 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 NQO1P15559 274 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 AGTR1P30556 359 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 SLC35A2P78381 396 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 MRPL51Q4U2R6 128 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 ACSBG2Q5FVE4 666 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 Q6ZRU5 148 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 LFNGQ8NES3 379 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 METTL9Q9H1A3 318 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 HEY1Q9Y5J3 304 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 CEP162Q5TB80 1403 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 PLXNC1O60486 1568 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 CEP170BQ9Y4F5 1589 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 MYO5CQ9NQX4 1742 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 MTUS2Q5JR59 1369 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 CCNB3Q8WWL7 1395 aa1.97□□□□□ -2.09
SMCHD1-205ENST00000581383 EHBP1L1Q8N3D4 1523 aa1.96□□□□□ -2.09
SMCHD1-205ENST00000581383 PREX1Q8TCU6 1659 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 NCOA2Q15596 1464 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 MLH3Q9UHC1 1453 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 TMEM213A2RRL7 107 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 VPS37CA5D8V6 355 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 SOD1P00441 154 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 OR13C7P0DN81 318 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 PSMD8P48556 350 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 DNAL1Q4LDG9 190 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 SPATA31B1PQ5VZV4 182 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 SCGB1D4Q6XE38 83 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 NATD1Q8N6N6 113 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 OR7G1Q8NGA0 311 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 ERMNQ8TAM6 284 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 STOML3Q8TAV4 291 aa1.96□□□□□ -2.1
SMCHD1-205ENST00000581383 MED28Q9H204 178 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms