RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 TREML4Q6UXN2 200 aa15.95■□□□□ 0.14
SS18-218ENST00000581021 OR2T10Q8NGZ9 312 aa15.95■□□□□ 0.14
SS18-218ENST00000581021 NUDCD2Q8WVJ2 157 aa15.95■□□□□ 0.14
SS18-218ENST00000581021 RITA1Q96K30 269 aa15.95■□□□□ 0.14
SS18-218ENST00000581021 CABLES2Q9BTV7 478 aa15.95■□□□□ 0.14
SS18-218ENST00000581021 MEGF8Q7Z7M0 2845 aa15.95■□□□□ 0.14
SS18-218ENST00000581021 ADARB2-AS1A8MUL3 147 aa15.94■□□□□ 0.14
SS18-218ENST00000581021 ITGB1BP1O14713 200 aa15.94■□□□□ 0.14
SS18-218ENST00000581021 FGF16O43320 207 aa15.94■□□□□ 0.14
SS18-218ENST00000581021 SSX5O60225 188 aa15.94■□□□□ 0.14
SS18-218ENST00000581021 PROP1O75360 226 aa15.94■□□□□ 0.14
SS18-218ENST00000581021 ZBTB25P24278 435 aa15.94■□□□□ 0.14
SS18-218ENST00000581021 F2RL1P55085 397 aa15.94■□□□□ 0.14
SS18-218ENST00000581021 ARFRP1Q13795 201 aa15.94■□□□□ 0.14
SS18-218ENST00000581021 ZNF260Q3ZCT1 412 aa15.94■□□□□ 0.14
SS18-218ENST00000581021 ARSJQ5FYB0 599 aaPredicted RBP15.94■□□□□ 0.14
SS18-218ENST00000581021 TCTEX1D4Q5JR98 221 aa15.94■□□□□ 0.14
SS18-218ENST00000581021 C9orf152Q5JTZ5 239 aa15.94■□□□□ 0.14
SS18-218ENST00000581021 DTX3Q8N9I9 347 aa15.94■□□□□ 0.14
SS18-218ENST00000581021 Q8N9W7 124 aa15.94■□□□□ 0.14
SS18-218ENST00000581021 OR4A4PQ8NGN8 299 aa15.94■□□□□ 0.14
SS18-218ENST00000581021 NAA50Q9GZZ1 169 aaKnown RBP15.94■□□□□ 0.14
SS18-218ENST00000581021 RDH8Q9NYR8 311 aa15.94■□□□□ 0.14
SS18-218ENST00000581021 ETV7Q9Y603 341 aa15.94■□□□□ 0.14
SS18-218ENST00000581021 TET2Q6N021 2002 aaPredicted RBP15.94■□□□□ 0.14
SS18-218ENST00000581021 LINC01548A6NM66 108 aa15.93■□□□□ 0.14
SS18-218ENST00000581021 M0QZ24 198 aa15.93■□□□□ 0.14
SS18-218ENST00000581021 HSPA12AO43301 675 aa15.93■□□□□ 0.14
SS18-218ENST00000581021 FBXO24O75426 580 aa15.93■□□□□ 0.14
SS18-218ENST00000581021 MOSP00540 346 aa15.93■□□□□ 0.14
SS18-218ENST00000581021 SCAND1P57086 179 aa15.93■□□□□ 0.14
SS18-218ENST00000581021 MRPS15P82914 257 aaKnown RBP15.93■□□□□ 0.14
SS18-218ENST00000581021 HACD4Q5VWC8 232 aa15.93■□□□□ 0.14
SS18-218ENST00000581021 CITED2Q99967 270 aaPredicted RBP15.93■□□□□ 0.14
SS18-218ENST00000581021 RNF150Q9ULK6 438 aa15.93■□□□□ 0.14
SS18-218ENST00000581021 TRBV6-7A0A0A0MS04 114 aa15.92■□□□□ 0.14
SS18-218ENST00000581021 BET1O15155 118 aa15.92■□□□□ 0.14
SS18-218ENST00000581021 CT45A6P0DMU7 189 aa15.92■□□□□ 0.14
SS18-218ENST00000581021 CT45A5P0DMU8 189 aa15.92■□□□□ 0.14
SS18-218ENST00000581021 CT45A7P0DMV0 189 aa15.92■□□□□ 0.14
SS18-218ENST00000581021 LINC00205P59089 165 aa15.92■□□□□ 0.14
SS18-218ENST00000581021 GLDNQ6ZMI3 551 aaPredicted RBP15.92■□□□□ 0.14
SS18-218ENST00000581021 Q6ZS49 121 aa15.92■□□□□ 0.14
SS18-218ENST00000581021 C5orf30Q96GV9 206 aa15.92■□□□□ 0.14
SS18-218ENST00000581021 TOLLIPQ9H0E2 274 aa15.92■□□□□ 0.14
SS18-218ENST00000581021 NCBP2LA6PVI3 153 aaKnown RBP15.91■□□□□ 0.14
SS18-218ENST00000581021 RAB29O14966 203 aa15.91■□□□□ 0.14
SS18-218ENST00000581021 GSTP1P09211 210 aaKnown RBP15.91■□□□□ 0.14
SS18-218ENST00000581021 DTYMKP23919 212 aa15.91■□□□□ 0.14
SS18-218ENST00000581021 CNTFRP26992 372 aa15.91■□□□□ 0.14
SS18-218ENST00000581021 VBP1P61758 197 aa15.91■□□□□ 0.14
SS18-218ENST00000581021 KIR2DS1Q14954 304 aa15.91■□□□□ 0.14
SS18-218ENST00000581021 FAM71F2Q6NXP2 309 aa15.91■□□□□ 0.14
SS18-218ENST00000581021 FAM71E2Q8N5Q1 922 aa15.91■□□□□ 0.14
SS18-218ENST00000581021 NOL4LQ96MY1 436 aaPredicted RBP15.91■□□□□ 0.14
SS18-218ENST00000581021 S1PR3Q99500 378 aa15.91■□□□□ 0.14
SS18-218ENST00000581021 PIPOXQ9P0Z9 390 aa15.91■□□□□ 0.14
SS18-218ENST00000581021 SPATA2Q9UM82 520 aa15.91■□□□□ 0.14
SS18-218ENST00000581021 PEX14O75381 377 aa15.9■□□□□ 0.14
SS18-218ENST00000581021 TALDO1P37837 337 aa15.9■□□□□ 0.14
SS18-218ENST00000581021 SRSF7Q16629 238 aaKnown RBP eCLIP15.9■□□□□ 0.14
SS18-218ENST00000581021 C2orf68Q2NKX9 166 aa15.9■□□□□ 0.14
SS18-218ENST00000581021 FAM131AQ6UXB0 335 aa15.9■□□□□ 0.14
SS18-218ENST00000581021 OR5AU1Q8NGC0 362 aa15.9■□□□□ 0.14
SS18-218ENST00000581021 EDARADDQ8WWZ3 215 aa15.9■□□□□ 0.14
SS18-218ENST00000581021 HSPB9Q9BQS6 159 aa15.9■□□□□ 0.14
SS18-218ENST00000581021 LINC00527Q9UJ94 153 aa15.9■□□□□ 0.14
SS18-218ENST00000581021 TRAV18A0A075B6X5 111 aa15.89■□□□□ 0.13
SS18-218ENST00000581021 SCGNO76038 276 aa15.89■□□□□ 0.13
SS18-218ENST00000581021 IGHG2P01859 326 aa15.89■□□□□ 0.13
SS18-218ENST00000581021 PTHLHP12272 177 aa15.89■□□□□ 0.13
SS18-218ENST00000581021 GPR12P47775 334 aa15.89■□□□□ 0.13
SS18-218ENST00000581021 SERPINB10P48595 397 aa15.89■□□□□ 0.13
SS18-218ENST00000581021 ACTBP60709 375 aa15.89■□□□□ 0.13
SS18-218ENST00000581021 ARL6IP1Q15041 203 aa15.89■□□□□ 0.13
SS18-218ENST00000581021 CTF1Q16619 201 aa15.89■□□□□ 0.13
SS18-218ENST00000581021 DRAXINQ8NBI3 349 aaPredicted RBP15.89■□□□□ 0.13
SS18-218ENST00000581021 SLC25A46Q96AG3 418 aa15.89■□□□□ 0.13
SS18-218ENST00000581021 ST6GALNAC5Q9BVH7 336 aa15.89■□□□□ 0.13
SS18-218ENST00000581021 ABCG5Q9H222 651 aa15.89■□□□□ 0.13
SS18-218ENST00000581021 LIN7CQ9NUP9 197 aaKnown RBP15.89■□□□□ 0.13
SS18-218ENST00000581021 NOTCH1P46531 2555 aa15.88■□□□□ 0.13
SS18-218ENST00000581021 H0YJW9 148 aa15.88■□□□□ 0.13
SS18-218ENST00000581021 GABARAPO95166 117 aa15.88■□□□□ 0.13
SS18-218ENST00000581021 DIRAS3O95661 229 aa15.88■□□□□ 0.13
SS18-218ENST00000581021 TFAP2AP05549 437 aa15.88■□□□□ 0.13
SS18-218ENST00000581021 ALDH3B2P48448 385 aa15.88■□□□□ 0.13
SS18-218ENST00000581021 CD83Q01151 205 aa15.88■□□□□ 0.13
SS18-218ENST00000581021 H1FOOQ8IZA3 346 aaPredicted RBP15.88■□□□□ 0.13
SS18-218ENST00000581021 FAM110DQ8TAY7 271 aaPredicted RBP15.88■□□□□ 0.13
SS18-218ENST00000581021 MRPS26Q9BYN8 205 aaKnown RBP15.88■□□□□ 0.13
SS18-218ENST00000581021 MMP27Q9H306 513 aa15.88■□□□□ 0.13
SS18-218ENST00000581021 TMEM127O75204 238 aa15.87■□□□□ 0.13
SS18-218ENST00000581021 CSF1P09603 554 aa15.87■□□□□ 0.13
SS18-218ENST00000581021 OR8U9P0C7N5 309 aa15.87■□□□□ 0.13
SS18-218ENST00000581021 GNG2P59768 71 aa15.87■□□□□ 0.13
SS18-218ENST00000581021 MMDQ15546 238 aa15.87■□□□□ 0.13
SS18-218ENST00000581021 PNLIPRP3Q17RR3 467 aa15.87■□□□□ 0.13
SS18-218ENST00000581021 NSUN5P1Q3KNT7 163 aa15.87■□□□□ 0.13
SS18-218ENST00000581021 SLC35E3Q7Z769 313 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms