RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 FAM46BQ96A09 425 aa11.32□□□□□ -0.6
SMARCE1-216ENST00000580419 FAAP24Q9BTP7 215 aa11.32□□□□□ -0.6
SMARCE1-216ENST00000580419 CENPOQ9BU64 300 aa11.32□□□□□ -0.6
SMARCE1-216ENST00000580419 ANKRD60Q9BZ19 345 aa11.32□□□□□ -0.6
SMARCE1-216ENST00000580419 TOLLIPQ9H0E2 274 aa11.32□□□□□ -0.6
SMARCE1-216ENST00000580419 LPAR5Q9H1C0 372 aa11.32□□□□□ -0.6
SMARCE1-216ENST00000580419 PLEKHJ1Q9NW61 149 aa11.32□□□□□ -0.6
SMARCE1-216ENST00000580419 KIAA1456Q9P272 454 aa11.32□□□□□ -0.6
SMARCE1-216ENST00000580419 IGHV7-81A0A0B4J1V7 117 aa11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 PTGES3LE9PB15 166 aa11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 I3L521 148 aa11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 CPEP16870 476 aa11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 MYF6P23409 242 aa11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 HOXD3P31249 432 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 LUMP51884 338 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 INSL4Q14641 139 aa11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 NKAPLQ5M9Q1 402 aa11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 FAM27D1Q5T7N8 215 aa11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 PYHIN1Q6K0P9 492 aa11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 LIN54Q6MZP7 749 aa11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 CD200R1LQ6Q8B3 271 aa11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 LCNL1Q6ZST4 164 aa11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 PRSS48Q7RTY5 328 aa11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 ZNF491Q8N8L2 437 aa11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 TMED9Q9BVK6 235 aa11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 MRPL20Q9BYC9 149 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 ACOT13Q9NPJ3 140 aa11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 VSIG4Q9Y279 399 aa11.31□□□□□ -0.6
SMARCE1-216ENST00000580419 NBEAL2Q6ZNJ1 2754 aa11.3□□□□□ -0.6
SMARCE1-216ENST00000580419 SPDEFO95238 335 aa11.3□□□□□ -0.6
SMARCE1-216ENST00000580419 OR8U8P0C7N1 319 aa11.3□□□□□ -0.6
SMARCE1-216ENST00000580419 ARSBP15848 533 aa11.3□□□□□ -0.6
SMARCE1-216ENST00000580419 GALP22466 123 aa11.3□□□□□ -0.6
SMARCE1-216ENST00000580419 ZBTB25P24278 435 aa11.3□□□□□ -0.6
SMARCE1-216ENST00000580419 MED22Q15528 200 aa11.3□□□□□ -0.6
SMARCE1-216ENST00000580419 TMEM65Q6PI78 240 aa11.3□□□□□ -0.6
SMARCE1-216ENST00000580419 TMEM91Q6ZNR0 172 aa11.3□□□□□ -0.6
SMARCE1-216ENST00000580419 C12orf4Q9NQ89 552 aa11.3□□□□□ -0.6
SMARCE1-216ENST00000580419 GAB2Q9UQC2 676 aa11.3□□□□□ -0.6
SMARCE1-216ENST00000580419 LSM4Q9Y4Z0 139 aaKnown RBP11.3□□□□□ -0.6
SMARCE1-216ENST00000580419 KMT2CQ8NEZ4 4911 aaKnown RBP11.3□□□□□ -0.6
SMARCE1-216ENST00000580419 TRAV41A0A0B4J266 112 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 RRHO14718 337 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 ATP6V0E1O15342 81 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 RGS10O43665 173 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 CT45A6P0DMU7 189 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 CT45A5P0DMU8 189 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 CT45A7P0DMV0 189 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 SERPINB10P48595 397 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 RAB9AP51151 201 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 TMEM267Q0VDI3 215 aaPredicted RBP11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 P2RY14Q15391 338 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 AKIRIN2Q53H80 203 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 DEFB121Q5J5C9 76 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 LIPKQ5VXJ0 399 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 OR10K2Q6IF99 312 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 OR56B1Q8NGI3 324 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 NICN1Q9BSH3 213 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 VCX3BQ9H321 246 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 SCOCQ9UIL1 159 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 RNF150Q9ULK6 438 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 WASHC3Q9Y3C0 194 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 NUBP2Q9Y5Y2 271 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 TNCP24821 2201 aa11.29□□□□□ -0.6
SMARCE1-216ENST00000580419 H0YJW9 148 aa11.28□□□□□ -0.6
SMARCE1-216ENST00000580419 LDLRAD4O15165 306 aa11.28□□□□□ -0.6
SMARCE1-216ENST00000580419 BRI3O95415 125 aa11.28□□□□□ -0.6
SMARCE1-216ENST00000580419 SLC2A2P11168 524 aaPredicted RBP11.28□□□□□ -0.6
SMARCE1-216ENST00000580419 CRHBPP24387 322 aa11.28□□□□□ -0.6
SMARCE1-216ENST00000580419 OR3A3P47888 321 aa11.28□□□□□ -0.6
SMARCE1-216ENST00000580419 HSPA13P48723 471 aa11.28□□□□□ -0.6
SMARCE1-216ENST00000580419 TMEM50BP56557 158 aa11.28□□□□□ -0.6
SMARCE1-216ENST00000580419 HLA-DRB3P79483 266 aa11.28□□□□□ -0.6
SMARCE1-216ENST00000580419 TAGLNQ01995 201 aaKnown RBP11.28□□□□□ -0.6
SMARCE1-216ENST00000580419 CD69Q07108 199 aa11.28□□□□□ -0.6
SMARCE1-216ENST00000580419 ZNF616Q08AN1 781 aa11.28□□□□□ -0.6
SMARCE1-216ENST00000580419 SRSF7Q16629 238 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMARCE1-216ENST00000580419 ZNF562Q6V9R5 426 aa11.28□□□□□ -0.6
SMARCE1-216ENST00000580419 OR11H1Q8NG94 326 aa11.28□□□□□ -0.6
SMARCE1-216ENST00000580419 IL1F10Q8WWZ1 152 aa11.28□□□□□ -0.6
SMARCE1-216ENST00000580419 Q9N2K0 584 aa11.28□□□□□ -0.6
SMARCE1-216ENST00000580419 A0A0A6YYD4 124 aa11.27□□□□□ -0.61
SMARCE1-216ENST00000580419 TRAV1-2A0A0B4J238 106 aa11.27□□□□□ -0.61
SMARCE1-216ENST00000580419 SEC14L6B5MCN3 397 aa11.27□□□□□ -0.61
SMARCE1-216ENST00000580419 SOCS1O15524 211 aa11.27□□□□□ -0.61
SMARCE1-216ENST00000580419 TBCEQ15813 527 aaPredicted RBP11.27□□□□□ -0.61
SMARCE1-216ENST00000580419 RAB11BQ15907 218 aa11.27□□□□□ -0.61
SMARCE1-216ENST00000580419 ZNF429Q86V71 674 aa11.27□□□□□ -0.61
SMARCE1-216ENST00000580419 RITA1Q96K30 269 aa11.27□□□□□ -0.61
SMARCE1-216ENST00000580419 GFI1Q99684 422 aa11.27□□□□□ -0.61
SMARCE1-216ENST00000580419 MGLLQ99685 303 aa11.27□□□□□ -0.61
SMARCE1-216ENST00000580419 PLGRKTQ9HBL7 147 aa11.27□□□□□ -0.61
SMARCE1-216ENST00000580419 CHMP1AQ9HD42 196 aaPredicted RBP11.27□□□□□ -0.61
SMARCE1-216ENST00000580419 AK3Q9UIJ7 227 aa11.27□□□□□ -0.61
SMARCE1-216ENST00000580419 FOXA2Q9Y261 457 aaPredicted RBP11.27□□□□□ -0.61
SMARCE1-216ENST00000580419 MRPS14O60783 128 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 CEACAM6P40199 344 aa11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 AQP4P55087 323 aa11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 CX3CL1P78423 397 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms