RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 A0A1B0GWJ7 208 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 A0A1W2PPR1 153 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 TMEM210A6NLX4 147 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 HSD17B6O14756 317 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 NXPH3O95157 252 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CAV2P51636 162 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 TNFAIP6P98066 277 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 ETV3LQ6ZN32 361 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 C20orf204Q6ZNR8 217 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 OR52M1Q8NGK5 317 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 TP53RKQ96S44 253 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 SUCNR1Q9BXA5 334 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 TAF9BQ9HBM6 251 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FBXL17Q9UF56 701 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 POLDIP2Q9Y2S7 368 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 RNF115Q9Y4L5 304 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CSMD2Q7Z408 3487 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 KIR2DS1A0A191URI9 304 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 C5orf52A6NGY3 159 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 TRDCB7Z8K6 153 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 C9JQL5 133 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 K7EPK0 472 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 TNFSF12O43508 249 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 MED6O75586 246 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 RPL12P30050 165 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 KIR2DS4P43632 304 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 TMEM33P57088 247 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 KIR2DS1Q14954 304 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 HERPUD1Q15011 391 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 AARDQ4LEZ3 155 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 LIAT1Q6ZQX7 453 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FAM71E2Q8N5Q1 922 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 UBALD1Q8TB05 177 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 UBE2J1Q9Y385 318 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 RNASEK-C17orf49H0YIS7 233 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 MPPED1O15442 326 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 OR2H2O95918 312 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CYB5R3P00387 301 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 S100A8P05109 93 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 LOXP28300 417 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 GNRHRP30968 328 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 AKR1C3P42330 323 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 F2RL1P55085 397 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 KRBOX4Q5JUW0 171 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 TMEM268Q5VZI3 342 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 LGI3Q8N145 548 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 DEFB108BQ8NET1 73 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 C14orf79Q96F83 325 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 GALNT14Q96FL9 552 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 AQP10Q96PS8 301 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 RSRP1Q9BUV0 290 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 GCM1Q9NP62 436 aa10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 MAP1AP78559 2803 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-217ENST00000580287 IGKV1D-13A0A0B4J2D9 117 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 C3orf85A0A1B0GTC6 90 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 UBE2CO00762 179 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 TXNL1O43396 289 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 PSPNO60542 156 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 MBPP02686 304 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 S100A9P06702 114 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 IGKV1-13P0DP09 117 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 Q6P435 159 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 ZNF818PQ6ZRF7 136 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 TBC1D26Q86UD7 250 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 GAPTQ8N292 157 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 GCSAMQ8N6F7 178 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 MRPL30Q8TCC3 161 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 SMIM8Q96KF7 97 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CLCC1Q96S66 551 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 NIT2Q9NQR4 276 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 SMCO4Q9NRQ5 59 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 UBR5O95071 2799 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 C17orf100A8MU93 164 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 C1orf196B1AJZ1 125 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CD200P41217 278 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 PPT1P50897 306 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 UCP3P55916 312 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 SLC35G3Q8N808 338 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 C15orf54Q8N8G6 183 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 EGLN1Q9GZT9 426 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CCL28Q9NRJ3 127 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 USF3Q68DE3 2245 aa10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 KMT2BQ9UMN6 2715 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-217ENST00000580287 IGKV1-6A0A0C4DH72 117 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 DEDDO75618 318 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 LYL1P12980 280 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 PAX6P26367 422 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 ACP7Q6ZNF0 438 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 LINC00596Q86U02 117 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 ZNF808Q8N4W9 903 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 HIST1H2BAQ96A08 127 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 MSI2Q96DH6 328 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 SAT2Q96F10 170 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 KIRREL1Q96J84 757 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 SEBOXQ9HB31 216 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 DNAJB11Q9UBS4 358 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 HCFC1P51610 2035 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 A0A1W2PPE3 182 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 OR8U9P0C7N5 309 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms