RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 C11orf49Q9H6J7 331 aa3.21□□□□□ -1.9
GAPLINC-201ENST00000578664 HES4Q9HCC6 221 aa3.21□□□□□ -1.9
GAPLINC-201ENST00000578664 PLSCR3Q9NRY6 295 aa3.21□□□□□ -1.9
GAPLINC-201ENST00000578664 DHRS4-AS1Q9P1J3 65 aa3.21□□□□□ -1.9
GAPLINC-201ENST00000578664 NEUROG3Q9Y4Z2 214 aa3.21□□□□□ -1.9
GAPLINC-201ENST00000578664 HEBP2Q9Y5Z4 205 aa3.21□□□□□ -1.9
GAPLINC-201ENST00000578664 TTC28Q96AY4 2481 aa3.21□□□□□ -1.9
GAPLINC-201ENST00000578664 TTC3P53804 2025 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 IGHV6-1A0A0B4J1U7 121 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 IGHV2-26A0A0B4J1V2 119 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 LOC389332A0A1B0GUA5 103 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 A0A1B0GUV1 79 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 IGSF23A1L1A6 192 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 C5orf49A4QMS7 147 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 EEF1E1-BLOC1S5C9J1V9 151 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 FAM72CH0Y354 149 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 K7EPK0 472 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 EEF1E1O43324 174 aaKnown RBP3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 PI15O43692 258 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 CCDC22O60826 627 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 YIF1AO95070 293 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 HBZP02008 142 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 BGLAPP02818 100 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 REG1AP05451 166 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 CECR9P0C854 216 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 CD34P28906 385 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 S100GP29377 79 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 NANOS3P60323 173 aaKnown RBP3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 HSPE1P61604 102 aaKnown RBP3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 RHOBP62745 196 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 DYNLL1P63167 89 aaKnown RBP3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 PNOCQ13519 176 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 GUCA2BQ16661 112 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 IAH1Q2TAA2 248 aaPredicted RBP3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 ZNF404Q494X3 552 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 TCEAL5Q5H9L2 206 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 TCTEX1D4Q5JR98 221 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 SLC25A30Q5SVS4 291 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 TMEM78Q5T7P6 136 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 FAM72AQ5TYM5 149 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 LEMD1Q68G75 181 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 FAM72DQ6L9T8 149 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 LPCAT3Q6P1A2 487 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 TBPL2Q6SJ96 375 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 PAMR1Q6UXH9 720 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 CLEC20AQ6ZU45 233 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 VN1R4Q7Z5H5 301 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 FAM72BQ86X60 149 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 DEFB125Q8N687 156 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 ZNF614Q8N883 585 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 ZNF439Q8NDP4 499 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 OR52L1Q8NGH7 329 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 OR51A2Q8NGJ7 313 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 OR2K2Q8NGT1 345 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 OR5K1Q8NHB7 308 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 LMO3Q8TAP4 145 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 DCAKDQ8WVC6 231 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 TCEAL3Q969E4 200 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 DIRAS2Q96HU8 199 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 PYURFQ96I23 114 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 TSC22D3Q99576 134 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 PRSS27Q9BQR3 290 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 SAMD10Q9BYL1 202 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 KRTAP17-1Q9BYP8 105 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 SLC17A9Q9BYT1 436 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 ALX4Q9H161 411 aaPredicted RBP3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 FGF22Q9HCT0 170 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 PARP11Q9NR21 331 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 MRPL27Q9P0M9 148 aaKnown RBP3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 GSKIPQ9P0R6 139 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 RNF7Q9UBF6 113 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 KLK13Q9UKR3 277 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 FOCADQ5VW36 1801 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 VWA8A3KMH1 1905 aa3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 PHF3Q92576 2039 aaKnown RBP3.2□□□□□ -1.9
GAPLINC-201ENST00000578664 IGKV1-27A0A075B6S5 117 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 IGHV3OR16-10A0A075B7F0 116 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 A0A087X002 238 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 TRAV8-3A0A0A6YYJ7 113 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 A0A0D9SFI3 127 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 WI2-2373I1.2A0A1W2PRP0 233 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 CD300LBA8K4G0 201 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 MIF4GDA9UHW6 222 aaKnown RBP3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 K7EQS6 105 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 SOCS3O14543 225 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 PDE6DO43924 150 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 NTN1O95631 604 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 OR4Q2P0C623 313 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 ERP29P30040 261 aaKnown RBP3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 CDKN2AP42771 156 aaKnown RBP3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 ZNF133P52736 654 aaPredicted RBP3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 RAB2AP61019 212 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 TIMM10P62072 90 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 HPCAP84074 193 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 RUNX1Q01196 453 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 PMAIP1Q13794 54 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 IRF4Q15306 451 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 RSPO1Q2MKA7 263 aaPredicted RBP3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 ZNF585BQ52M93 769 aa3.19□□□□□ -1.9
GAPLINC-201ENST00000578664 GLYATQ6IB77 296 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms