RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 ATP5J2P56134 94 aa15.26■□□□□ 0.03
PRKCA-203ENST00000578063 SRSF4Q08170 494 aaKnown RBP15.26■□□□□ 0.03
PRKCA-203ENST00000578063 ZNF439Q8NDP4 499 aa15.26■□□□□ 0.03
PRKCA-203ENST00000578063 OR2T35Q8NGX2 323 aa15.26■□□□□ 0.03
PRKCA-203ENST00000578063 PDCD10Q9BUL8 212 aa15.26■□□□□ 0.03
PRKCA-203ENST00000578063 BPESC1Q9GZL8 116 aa15.26■□□□□ 0.03
PRKCA-203ENST00000578063 IFI27L2Q9H2X8 130 aa15.26■□□□□ 0.03
PRKCA-203ENST00000578063 USP9YO00507 2555 aaPredicted RBP15.25■□□□□ 0.03
PRKCA-203ENST00000578063 NDUFS8O00217 210 aa15.25■□□□□ 0.03
PRKCA-203ENST00000578063 RBP4P02753 201 aa15.25■□□□□ 0.03
PRKCA-203ENST00000578063 GSG1LQ6UXU4 331 aa15.25■□□□□ 0.03
PRKCA-203ENST00000578063 OR51H1Q8NH63 302 aa15.25■□□□□ 0.03
PRKCA-203ENST00000578063 ABHD14BQ96IU4 210 aa15.25■□□□□ 0.03
PRKCA-203ENST00000578063 TMEM56Q96MV1 263 aa15.25■□□□□ 0.03
PRKCA-203ENST00000578063 GPHA2Q96T91 129 aa15.25■□□□□ 0.03
PRKCA-203ENST00000578063 RANBP3Q9H6Z4 567 aaPredicted RBP15.25■□□□□ 0.03
PRKCA-203ENST00000578063 METTL8Q9H825 291 aaKnown RBP15.25■□□□□ 0.03
PRKCA-203ENST00000578063 SDHAF2Q9NX18 166 aa15.25■□□□□ 0.03
PRKCA-203ENST00000578063 GAB2Q9UQC2 676 aa15.25■□□□□ 0.03
PRKCA-203ENST00000578063 TMEM56-RWDD3S4R434 201 aa15.25■□□□□ 0.03
PRKCA-203ENST00000578063 PPIAL4CA0A0B4J2A2 164 aa15.24■□□□□ 0.03
PRKCA-203ENST00000578063 C17orf98A8MV24 154 aa15.24■□□□□ 0.03
PRKCA-203ENST00000578063 FAM25EA8MYX2 175 aa15.24■□□□□ 0.03
PRKCA-203ENST00000578063 ADAP1O75689 374 aa15.24■□□□□ 0.03
PRKCA-203ENST00000578063 IGHV2-5P01817 119 aa15.24■□□□□ 0.03
PRKCA-203ENST00000578063 PPIAL4GP0DN37 164 aa15.24■□□□□ 0.03
PRKCA-203ENST00000578063 ZNF134P52741 427 aa15.24■□□□□ 0.03
PRKCA-203ENST00000578063 CATR1Q13166 79 aa15.24■□□□□ 0.03
PRKCA-203ENST00000578063 CT45A1Q5HYN5 189 aa15.24■□□□□ 0.03
PRKCA-203ENST00000578063 ZNF787Q6DD87 383 aa15.24■□□□□ 0.03
PRKCA-203ENST00000578063 ZNF66Q6ZN08 573 aa15.24■□□□□ 0.03
PRKCA-203ENST00000578063 NOXA1Q86UR1 476 aa15.24■□□□□ 0.03
PRKCA-203ENST00000578063 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.24■□□□□ 0.03
PRKCA-203ENST00000578063 LY6G5BQ8NDX9 201 aa15.24■□□□□ 0.03
PRKCA-203ENST00000578063 CT45A3Q8NHU0 189 aa15.24■□□□□ 0.03
PRKCA-203ENST00000578063 C5orf30Q96GV9 206 aa15.24■□□□□ 0.03
PRKCA-203ENST00000578063 PIMREGQ9BSJ6 248 aa15.24■□□□□ 0.03
PRKCA-203ENST00000578063 C5orf51A6NDU8 294 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 SMLR1H3BR10 107 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 IFNA21P01568 189 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 LIPFP07098 398 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 HOXB5P09067 269 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 EIF4EBP1Q13541 118 aaPredicted RBP15.23■□□□□ 0.03
PRKCA-203ENST00000578063 CLEC2AQ6UVW9 174 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 SLC25A48Q6ZT89 311 aaKnown RBP15.23■□□□□ 0.03
PRKCA-203ENST00000578063 FAM168AQ92567 244 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 LEAP2Q969E1 77 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 IL22RA2Q969J5 263 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 C18orf12Q96KH6 178 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 HSD17B10Q99714 261 aaKnown RBP15.23■□□□□ 0.03
PRKCA-203ENST00000578063 A0A087X0M5 115 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 A0A1B0GX30 115 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 hCG_1809904A0A1W2PP81 198 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 A0A1W2PPE2 198 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 DUXBA0A1W2PPF3 345 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 A0A1W2PR64 198 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 A0A1W2PRV1 198 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 C22orf46C9J442 243 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 SLC31A2O15432 143 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 CDS2O95674 445 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 IGHV3-7P01780 117 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 IGHV1-8P0DP01 117 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 GZMKP49863 264 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 CYCSP99999 105 aaKnown RBP15.23■□□□□ 0.03
PRKCA-203ENST00000578063 ZNF695Q8IW36 515 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 TCTEX1D1Q8N7M0 179 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 C8orf31Q8N9H6 132 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 GSX2Q9BZM3 304 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 SESN1Q9Y6P5 492 aa15.23■□□□□ 0.03
PRKCA-203ENST00000578063 LOC105371242A0A075B767 164 aa15.22■□□□□ 0.03
PRKCA-203ENST00000578063 C13orf42A0A1B0GVH6 325 aa15.22■□□□□ 0.03
PRKCA-203ENST00000578063 RAB29O14966 203 aa15.22■□□□□ 0.03
PRKCA-203ENST00000578063 SERPINE2P07093 398 aa15.22■□□□□ 0.03
PRKCA-203ENST00000578063 DNASE1P24855 282 aa15.22■□□□□ 0.03
PRKCA-203ENST00000578063 GNG10P50151 68 aa15.22■□□□□ 0.03
PRKCA-203ENST00000578063 UTF1Q5T230 341 aa15.22■□□□□ 0.03
PRKCA-203ENST00000578063 TMEM268Q5VZI3 342 aa15.22■□□□□ 0.03
PRKCA-203ENST00000578063 LHFPL5Q8TAF8 219 aa15.22■□□□□ 0.03
PRKCA-203ENST00000578063 NRGNQ92686 78 aa15.22■□□□□ 0.03
PRKCA-203ENST00000578063 RBPMSQ93062 196 aaKnown RBP15.22■□□□□ 0.03
PRKCA-203ENST00000578063 HYLS1Q96M11 299 aa15.22■□□□□ 0.03
PRKCA-203ENST00000578063 PSMG3-AS1Q96PY0 264 aa15.22■□□□□ 0.03
PRKCA-203ENST00000578063 TMED3Q9Y3Q3 217 aa15.22■□□□□ 0.03
PRKCA-203ENST00000578063 ZNF16P17020 682 aaPredicted RBP15.21■□□□□ 0.03
PRKCA-203ENST00000578063 GGNBP1Q5YKI7 109 aa15.21■□□□□ 0.03
PRKCA-203ENST00000578063 BTNL3Q6UXE8 466 aa15.21■□□□□ 0.03
PRKCA-203ENST00000578063 C11orf42Q8N5U0 333 aa15.21■□□□□ 0.03
PRKCA-203ENST00000578063 C10orf105Q8TEF2 133 aa15.21■□□□□ 0.03
PRKCA-203ENST00000578063 NMES1Q9C002 83 aa15.21■□□□□ 0.03
PRKCA-203ENST00000578063 FAM212BQ9NTI7 297 aaPredicted RBP15.21■□□□□ 0.03
PRKCA-203ENST00000578063 HELZ2Q9BYK8 2649 aaKnown RBP15.21■□□□□ 0.03
PRKCA-203ENST00000578063 A0A1W2PPE3 182 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 A8MXK9 166 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 DSCR9P59020 149 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 ERVFRD-1P60508 538 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 LYZL2Q7Z4W2 148 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 SELENOHQ8IZQ5 122 aaKnown RBP15.2■□□□□ 0.02
PRKCA-203ENST00000578063 LYG1Q8N1E2 194 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 LINC00311Q8N616 119 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 SLC35G3Q8N808 338 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms