RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 SEC11BP0C7V7 166 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 LYNX1P0DP58 116 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 ERGP11308 486 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 IL7P13232 177 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 COL8A1P27658 744 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 GATA4P43694 442 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 ZP1P60852 638 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 RAB5BP61020 215 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 IGLV3-21P80748 117 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 KIAA0040Q15053 153 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 DEFB113Q30KQ7 82 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 SLC25A47Q6Q0C1 308 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF66Q6ZN08 573 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 FA2HQ7L5A8 372 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 MAVSQ7Z434 540 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 BPIFA4PQ86YQ2 179 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 RIMKLAQ8IXN7 391 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 CHAC2Q8WUX2 184 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 DUX3Q96PT4 197 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 C1QTNF4Q9BXJ3 329 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 PLSCR4Q9NRQ2 329 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 CLEC2DQ9UHP7 191 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 AK3Q9UIJ7 227 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 ANXA10Q9UJ72 324 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 FBXL7Q9UJT9 491 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 RALGAPA1Q6GYQ0 2036 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 TDRD15B5MCY1 1934 aaKnown RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 H3BUX3 64 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 PTTG1O95997 202 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 CD5P06127 495 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 DCTDP32321 178 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 HINT1P49773 126 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 SUCLG1P53597 346 aaKnown RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 DHRS2Q13268 280 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 USF2Q15853 346 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 Q1RN00 199 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 C2orf68Q2NKX9 166 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 SPINK9Q5DT21 86 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 LCE2DQ5TA82 110 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 LEMD1Q68G75 181 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 TEX38Q6PEX7 206 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 IGFL3Q6UXB1 125 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 SIAH3Q8IW03 269 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 C11orf42Q8N5U0 333 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF485Q8NCK3 441 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 KLHL30-AS1Q8NEE0 82 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 IL17DQ8TAD2 202 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 DTD1Q8TEA8 209 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 DEDD2Q8WXF8 326 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 C18orf12Q96KH6 178 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF436Q9C0F3 470 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF696Q9H7X3 374 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 RBFOX1Q9NWB1 397 aaKnown RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 COL11A2P13942 1736 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 TAF1LQ8IZX4 1826 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 TRAV1-2A0A0B4J238 106 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 DUSP14O95147 198 aaKnown RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 PGA4P0DJD7 388 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 EGR1P18146 543 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 GCAP28676 217 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 RPL12P30050 165 aaKnown RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 WNT5AP41221 380 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 NPBWR2P48146 333 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 CLDN18P56856 261 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 H3F3AP84243 136 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 HIST1H1AQ02539 215 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 TMEM128Q5BJH2 165 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM159AQ6UWV7 190 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 OR5AP2Q8NGF4 316 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 OR13C5Q8NGS8 318 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 OR52I2Q8NH67 350 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 RXFP4Q8TDU9 374 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 LSM10Q969L4 123 aaKnown RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 MRPL37Q9BZE1 423 aaKnown RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 BPESC1Q9GZL8 116 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 PPIL3Q9H2H8 161 aaKnown RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM90A10PA6NDY2 464 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 MBD3L4A6NDZ8 208 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM90A18PA6NE21 464 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 MBD3L3A6NE82 208 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM90A16PA6NEW6 464 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 MFSD2BA6NFX1 497 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM90A20PA6NIJ5 464 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 MBD3L5A6NJ08 208 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM90A8PA6NJQ4 464 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM90A7PA6NKC0 464 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 CEACAM18A8MTB9 384 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM90A22PA8MWA6 464 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM90A12PA8MX19 464 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM90A5PA8MXJ8 464 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM90A23PA8MXZ1 464 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 OOSP1A8MZH6 123 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 CTDSP2O14595 271 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 GATCO43716 136 aaKnown RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 DEDDO75618 318 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 F12P00748 615 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM90A15PP0C7V4 464 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM90A13PP0C7W8 464 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM90A14PP0C7W9 464 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM90A24PP0C7X0 464 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms