RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CSN3P07498 182 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 SAA2P0DJI9 122 aaPredicted RBP7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 CT45A6P0DMU7 189 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 CT45A5P0DMU8 189 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 CT45A7P0DMV0 189 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 GTF2F2P13984 249 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 ZP3P21754 424 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 CD40LGP29965 261 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 CAPGP40121 348 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 DDI2Q5TDH0 399 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 TTC23Q5W5X9 447 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 RAB12Q6IQ22 244 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 FAM131AQ6UXB0 335 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 LINC00596Q86U02 117 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 RPP25LQ8N5L8 163 aaKnown RBP7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 DEFB125Q8N687 156 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 OR5T1Q8NG75 326 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 FBLIM1Q8WUP2 373 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 TRUB1Q8WWH5 349 aaKnown RBP7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 LGALS12Q96DT0 336 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 GABARAPL3Q9BY60 117 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 SLA2Q9H6Q3 261 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 RAB9BQ9NP90 201 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 PEX16Q9Y5Y5 336 aa7.67□□□□□ -1.18
NPLOC4-220ENST00000576940 C13orf42A0A1B0GVH6 325 aa7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 UBE2QL1A1L167 161 aa7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 TNFAIP8O95379 198 aa7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 FADS2O95864 444 aaKnown RBP7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 GSTP1P09211 210 aaKnown RBP7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 CD7P09564 240 aa7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 CD81P60033 236 aa7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 DEFA5Q01523 94 aa7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 DYRK1AQ13627 763 aa7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 TMEM30BQ3MIR4 351 aa7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 KCTD21Q4G0X4 260 aa7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 ZNF562Q6V9R5 426 aa7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 GAPTQ8N292 157 aa7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 SYS1Q8N2H4 156 aa7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 DHRSXQ8N5I4 330 aa7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 DDB2Q92466 427 aa7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 ST6GALNAC5Q9BVH7 336 aa7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 WFDC10AQ9H1F0 79 aa7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 TMEM138Q9NPI0 162 aa7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 PAK1IP1Q9NWT1 392 aaPredicted RBP7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 RCC2Q9P258 522 aaKnown RBP7.66□□□□□ -1.18
NPLOC4-220ENST00000576940 SAC3D1A6NKF1 404 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 ZNF785A8K8V0 405 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 ST8SIA5O15466 376 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 YPEL1O60688 119 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 ZNF780AO75290 641 aaPredicted RBP7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 CA2P00918 260 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 TRBV12-3P01733 135 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 MAS1P04201 325 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 TFAP2AP05549 437 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 BDKRB2P30411 391 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 MECP2P51608 486 aaKnown RBP7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 GBX2P52951 348 aaPredicted RBP7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 PMS2P11Q13670 270 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 RPL39P5Q59GN2 51 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 SLC25A30Q5SVS4 291 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 LCN12Q6JVE5 192 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 Q8N402 240 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 TMEM106AQ96A25 262 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 YPEL2Q96QA6 119 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 NEURL2Q9BR09 285 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 PARP12Q9H0J9 701 aaKnown RBP7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 IFI27L2Q9H2X8 130 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 BANF2Q9H503 90 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 SPACA1Q9HBV2 294 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 AMBNQ9NP70 447 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 MBNL3Q9NUK0 354 aaKnown RBP7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 IMPAD1Q9NX62 359 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 ERVK13-1Q9NX77 482 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 KCNIP1Q9NZI2 227 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 METTL1Q9UBP6 276 aaKnown RBP7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 JPT1Q9UK76 154 aa7.65□□□□□ -1.18
NPLOC4-220ENST00000576940 H7C2Y5 167 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 MRPS14O60783 128 aaKnown RBP7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 TPPPO94811 219 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 CNIH1O95406 144 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 CD2P06729 351 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 LINC00205P59089 165 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 SNRPGP62308 76 aaKnown RBP7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 HTD2P86397 168 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 FXYD3Q14802 87 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 PSG5Q15238 335 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 TATDN3Q17R31 274 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 MEDAGQ5VYS4 303 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 XAF1Q6GPH4 301 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 SIGIRRQ6IA17 410 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 TRAT1Q6PIZ9 186 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 GLIPR1L1Q6UWM5 242 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 POC5Q8NA72 575 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 SETD9Q8NE22 299 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 OR2AK2Q8NG84 335 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 GRPEL2Q8TAA5 225 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 MRPL30Q8TCC3 161 aaKnown RBP7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 GPR148Q8TDV2 347 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 MUL1Q969V5 352 aa7.64□□□□□ -1.19
NPLOC4-220ENST00000576940 ABHD14BQ96IU4 210 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms