RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 SERPINB10P48595 397 aa12.99□□□□□ -0.33
TVP23B-206ENST00000574226 F2RL1P55085 397 aa12.99□□□□□ -0.33
TVP23B-206ENST00000574226 ACTBP60709 375 aa12.99□□□□□ -0.33
TVP23B-206ENST00000574226 ARL6IP1Q15041 203 aa12.99□□□□□ -0.33
TVP23B-206ENST00000574226 SSX1Q16384 188 aa12.99□□□□□ -0.33
TVP23B-206ENST00000574226 ZNF695Q8IW36 515 aa12.99□□□□□ -0.33
TVP23B-206ENST00000574226 RNF152Q8N8N0 203 aa12.99□□□□□ -0.33
TVP23B-206ENST00000574226 PTX4Q96A99 478 aa12.99□□□□□ -0.33
TVP23B-206ENST00000574226 ARHGAP5-AS1Q96IT6 56 aa12.99□□□□□ -0.33
TVP23B-206ENST00000574226 CMSS1Q9BQ75 279 aaKnown RBP12.99□□□□□ -0.33
TVP23B-206ENST00000574226 PECRQ9BY49 303 aa12.99□□□□□ -0.33
TVP23B-206ENST00000574226 MRPL20Q9BYC9 149 aaKnown RBP12.99□□□□□ -0.33
TVP23B-206ENST00000574226 IFI27L2Q9H2X8 130 aa12.99□□□□□ -0.33
TVP23B-206ENST00000574226 KIAA1456Q9P272 454 aa12.99□□□□□ -0.33
TVP23B-206ENST00000574226 ZMAT5Q9UDW3 170 aaKnown RBP12.99□□□□□ -0.33
TVP23B-206ENST00000574226 ZNF107Q9UII5 783 aaPredicted RBP12.99□□□□□ -0.33
TVP23B-206ENST00000574226 METTL21EPA6NDL7 271 aa12.98□□□□□ -0.33
TVP23B-206ENST00000574226 IFITM5A6NNB3 132 aa12.98□□□□□ -0.33
TVP23B-206ENST00000574226 NBR2O15453 112 aa12.98□□□□□ -0.33
TVP23B-206ENST00000574226 RBBP9O75884 186 aa12.98□□□□□ -0.33
TVP23B-206ENST00000574226 DIRAS3O95661 229 aa12.98□□□□□ -0.33
TVP23B-206ENST00000574226 HLA-DRB1P01911 266 aa12.98□□□□□ -0.33
TVP23B-206ENST00000574226 RAB6AP20340 208 aa12.98□□□□□ -0.33
TVP23B-206ENST00000574226 THBS3P49746 956 aa12.98□□□□□ -0.33
TVP23B-206ENST00000574226 TMEM50BP56557 158 aa12.98□□□□□ -0.33
TVP23B-206ENST00000574226 CLDN12P56749 244 aa12.98□□□□□ -0.33
TVP23B-206ENST00000574226 UBE2UQ5VVX9 321 aa12.98□□□□□ -0.33
TVP23B-206ENST00000574226 NPBQ8NG41 125 aa12.98□□□□□ -0.33
TVP23B-206ENST00000574226 DPF1Q92782 380 aa12.98□□□□□ -0.33
TVP23B-206ENST00000574226 RNF5Q99942 180 aa12.98□□□□□ -0.33
TVP23B-206ENST00000574226 Q9N2K0 584 aa12.98□□□□□ -0.33
TVP23B-206ENST00000574226 LINC00527Q9UJ94 153 aa12.98□□□□□ -0.33
TVP23B-206ENST00000574226 TMEM272A0A1B0GTI8 110 aa12.97□□□□□ -0.33
TVP23B-206ENST00000574226 LINC01548A6NM66 108 aa12.97□□□□□ -0.33
TVP23B-206ENST00000574226 IGHG4P01861 327 aa12.97□□□□□ -0.33
TVP23B-206ENST00000574226 CD3GP09693 182 aa12.97□□□□□ -0.33
TVP23B-206ENST00000574226 IGLL1P15814 213 aa12.97□□□□□ -0.33
TVP23B-206ENST00000574226 RAB3BP20337 219 aa12.97□□□□□ -0.33
TVP23B-206ENST00000574226 CEACAM6P40199 344 aa12.97□□□□□ -0.33
TVP23B-206ENST00000574226 OR3A3P47888 321 aa12.97□□□□□ -0.33
TVP23B-206ENST00000574226 CDX1P47902 265 aaPredicted RBP12.97□□□□□ -0.33
TVP23B-206ENST00000574226 KIR2DS1Q14954 304 aa12.97□□□□□ -0.33
TVP23B-206ENST00000574226 LINC00482Q8N8I6 264 aa12.97□□□□□ -0.33
TVP23B-206ENST00000574226 KLHL30-AS1Q8NEE0 82 aa12.97□□□□□ -0.33
TVP23B-206ENST00000574226 RAB3CQ96E17 227 aa12.97□□□□□ -0.33
TVP23B-206ENST00000574226 AGMATQ9BSE5 352 aa12.97□□□□□ -0.33
TVP23B-206ENST00000574226 TRDCB7Z8K6 153 aa12.96□□□□□ -0.33
TVP23B-206ENST00000574226 ST8SIA5O15466 376 aa12.96□□□□□ -0.33
TVP23B-206ENST00000574226 FGF9P31371 208 aaPredicted RBP12.96□□□□□ -0.33
TVP23B-206ENST00000574226 C5orf64Q2M2E5 130 aa12.96□□□□□ -0.33
TVP23B-206ENST00000574226 HES5Q5TA89 166 aa12.96□□□□□ -0.33
TVP23B-206ENST00000574226 FOXB2Q5VYV0 432 aa12.96□□□□□ -0.33
TVP23B-206ENST00000574226 LIN54Q6MZP7 749 aa12.96□□□□□ -0.33
TVP23B-206ENST00000574226 Q6ZPA2 131 aa12.96□□□□□ -0.33
TVP23B-206ENST00000574226 MRPL41Q8IXM3 137 aaKnown RBP12.96□□□□□ -0.33
TVP23B-206ENST00000574226 OR4A4PQ8NGN8 299 aa12.96□□□□□ -0.33
TVP23B-206ENST00000574226 OR8U1Q8NH10 309 aa12.96□□□□□ -0.33
TVP23B-206ENST00000574226 HSPB9Q9BQS6 159 aa12.96□□□□□ -0.33
TVP23B-206ENST00000574226 ZNF221Q9UK13 617 aa12.96□□□□□ -0.33
TVP23B-206ENST00000574226 NDUFA3O95167 84 aa12.95□□□□□ -0.34
TVP23B-206ENST00000574226 SLC2A2P11168 524 aaPredicted RBP12.95□□□□□ -0.34
TVP23B-206ENST00000574226 CFHR3Q02985 330 aa12.95□□□□□ -0.34
TVP23B-206ENST00000574226 PLAC9Q5JTB6 97 aa12.95□□□□□ -0.34
TVP23B-206ENST00000574226 C8orf86Q6ZUL3 223 aa12.95□□□□□ -0.34
TVP23B-206ENST00000574226 C5orf24Q7Z6I8 188 aa12.95□□□□□ -0.34
TVP23B-206ENST00000574226 TPRA1Q86W33 373 aa12.95□□□□□ -0.34
TVP23B-206ENST00000574226 SPARTQ8N0X7 666 aa12.95□□□□□ -0.34
TVP23B-206ENST00000574226 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.95□□□□□ -0.34
TVP23B-206ENST00000574226 OR5AN1Q8NGI8 311 aa12.95□□□□□ -0.34
TVP23B-206ENST00000574226 OR10R2Q8NGX6 335 aa12.95□□□□□ -0.34
TVP23B-206ENST00000574226 CYYR1Q96J86 154 aa12.95□□□□□ -0.34
TVP23B-206ENST00000574226 KCTD7Q96MP8 289 aa12.95□□□□□ -0.34
TVP23B-206ENST00000574226 P2RX4Q99571 388 aa12.95□□□□□ -0.34
TVP23B-206ENST00000574226 HDHD3Q9BSH5 251 aaPredicted RBP12.95□□□□□ -0.34
TVP23B-206ENST00000574226 TOLLIPQ9H0E2 274 aa12.95□□□□□ -0.34
TVP23B-206ENST00000574226 C11orf54Q9H0W9 315 aaPredicted RBP12.95□□□□□ -0.34
TVP23B-206ENST00000574226 OR51J1Q9H342 316 aa12.95□□□□□ -0.34
TVP23B-206ENST00000574226 WASHC3Q9Y3C0 194 aa12.95□□□□□ -0.34
TVP23B-206ENST00000574226 SCGNO76038 276 aa12.94□□□□□ -0.34
TVP23B-206ENST00000574226 RPLP1P05386 114 aaKnown RBP12.94□□□□□ -0.34
TVP23B-206ENST00000574226 GSTP1P09211 210 aaKnown RBP12.94□□□□□ -0.34
TVP23B-206ENST00000574226 SCTP09683 121 aa12.94□□□□□ -0.34
TVP23B-206ENST00000574226 CT45A6P0DMU7 189 aa12.94□□□□□ -0.34
TVP23B-206ENST00000574226 CT45A5P0DMU8 189 aa12.94□□□□□ -0.34
TVP23B-206ENST00000574226 CT45A7P0DMV0 189 aa12.94□□□□□ -0.34
TVP23B-206ENST00000574226 SRSF7Q16629 238 aaKnown RBP eCLIP12.94□□□□□ -0.34
TVP23B-206ENST00000574226 ZNF660Q6AZW8 331 aaPredicted RBP12.94□□□□□ -0.34
TVP23B-206ENST00000574226 C22orf42Q6IC83 251 aa12.94□□□□□ -0.34
TVP23B-206ENST00000574226 FAM131AQ6UXB0 335 aa12.94□□□□□ -0.34
TVP23B-206ENST00000574226 ETV3LQ6ZN32 361 aa12.94□□□□□ -0.34
TVP23B-206ENST00000574226 MRAPQ8TCY5 172 aa12.94□□□□□ -0.34
TVP23B-206ENST00000574226 H7C2Y5 167 aa12.93□□□□□ -0.34
TVP23B-206ENST00000574226 CCL24O00175 119 aa12.93□□□□□ -0.34
TVP23B-206ENST00000574226 FABP7O15540 132 aa12.93□□□□□ -0.34
TVP23B-206ENST00000574226 PSMB8P28062 276 aa12.93□□□□□ -0.34
TVP23B-206ENST00000574226 PSMB9P28065 219 aa12.93□□□□□ -0.34
TVP23B-206ENST00000574226 TAGLNQ01995 201 aaKnown RBP12.93□□□□□ -0.34
TVP23B-206ENST00000574226 RPL39P5Q59GN2 51 aa12.93□□□□□ -0.34
TVP23B-206ENST00000574226 TMEM65Q6PI78 240 aa12.93□□□□□ -0.34
TVP23B-206ENST00000574226 TCTEX1D1Q8N7M0 179 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms