RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 CT45A6P0DMU7 189 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 CT45A5P0DMU8 189 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 CT45A7P0DMV0 189 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 GP9P14770 177 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 CELP19835 753 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 CX3CL1P78423 397 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 GABPB1Q06547 395 aaPredicted RBP16.95■□□□□ 0.3
SNF8-216ENST00000573795 MED21Q13503 144 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 INSL4Q14641 139 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 RPL39P5Q59GN2 51 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 ZNF660Q6AZW8 331 aaPredicted RBP16.95■□□□□ 0.3
SNF8-216ENST00000573795 ACSM6Q6P461 480 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 SVOPQ8N4V2 548 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 CYGBQ8WWM9 190 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 ARPC1AQ92747 370 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 FAAP24Q9BTP7 215 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 GHRLQ9UBU3 117 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 GAB2Q9UQC2 676 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 FOXA2Q9Y261 457 aaPredicted RBP16.95■□□□□ 0.3
SNF8-216ENST00000573795 NUBP2Q9Y5Y2 271 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 EFCAB10A6NFE3 127 aa16.94■□□□□ 0.3
SNF8-216ENST00000573795 RRHO14718 337 aa16.94■□□□□ 0.3
SNF8-216ENST00000573795 ZNF880Q6PDB4 577 aa16.94■□□□□ 0.3
SNF8-216ENST00000573795 GLDNQ6ZMI3 551 aaPredicted RBP16.94■□□□□ 0.3
SNF8-216ENST00000573795 C6orf201Q7Z4U5 140 aa16.94■□□□□ 0.3
SNF8-216ENST00000573795 KCNK15Q9H427 330 aa16.94■□□□□ 0.3
SNF8-216ENST00000573795 A3GALT2U3KPV4 340 aa16.94■□□□□ 0.3
SNF8-216ENST00000573795 NAPSAO96009 420 aa16.93■□□□□ 0.3
SNF8-216ENST00000573795 RPS27AP62979 156 aaKnown RBP16.93■□□□□ 0.3
SNF8-216ENST00000573795 TTC23Q5W5X9 447 aa16.93■□□□□ 0.3
SNF8-216ENST00000573795 CD200R1LQ6Q8B3 271 aa16.93■□□□□ 0.3
SNF8-216ENST00000573795 LRRC42Q9Y546 428 aa16.93■□□□□ 0.3
SNF8-216ENST00000573795 HYDINQ4G0P3 5121 aa16.92■□□□□ 0.3
SNF8-216ENST00000573795 H0YJW9 148 aa16.92■□□□□ 0.3
SNF8-216ENST00000573795 HTR2CP28335 458 aa16.92■□□□□ 0.3
SNF8-216ENST00000573795 WNT4P56705 351 aa16.92■□□□□ 0.3
SNF8-216ENST00000573795 UNC119Q13432 240 aa16.92■□□□□ 0.3
SNF8-216ENST00000573795 LRRTM1Q86UE6 522 aa16.92■□□□□ 0.3
SNF8-216ENST00000573795 TCTEX1D1Q8N7M0 179 aa16.92■□□□□ 0.3
SNF8-216ENST00000573795 SETD9Q8NE22 299 aa16.92■□□□□ 0.3
SNF8-216ENST00000573795 IL1F10Q8WWZ1 152 aa16.92■□□□□ 0.3
SNF8-216ENST00000573795 NEDD4LQ96PU5 975 aa16.92■□□□□ 0.3
SNF8-216ENST00000573795 NICN1Q9BSH3 213 aa16.92■□□□□ 0.3
SNF8-216ENST00000573795 FAM103A1Q9BTL3 118 aaKnown RBP16.92■□□□□ 0.3
SNF8-216ENST00000573795 CNOT2Q9NZN8 540 aaKnown RBP16.92■□□□□ 0.3
SNF8-216ENST00000573795 PIPOXQ9P0Z9 390 aa16.92■□□□□ 0.3
SNF8-216ENST00000573795 SLC23A1Q9UHI7 598 aa16.92■□□□□ 0.3
SNF8-216ENST00000573795 OR5H14A6NHG9 310 aa16.91■□□□□ 0.3
SNF8-216ENST00000573795 RAB29O14966 203 aa16.91■□□□□ 0.3
SNF8-216ENST00000573795 IGHV3-11P01762 117 aa16.91■□□□□ 0.3
SNF8-216ENST00000573795 UBBP0CG47 229 aa16.91■□□□□ 0.3
SNF8-216ENST00000573795 C1orf100Q5SVJ3 147 aa16.91■□□□□ 0.3
SNF8-216ENST00000573795 OR6Q1Q8NGQ2 317 aa16.91■□□□□ 0.3
SNF8-216ENST00000573795 ABHD14BQ96IU4 210 aa16.91■□□□□ 0.3
SNF8-216ENST00000573795 AGMATQ9BSE5 352 aa16.91■□□□□ 0.3
SNF8-216ENST00000573795 TM2D1Q9BX74 207 aa16.91■□□□□ 0.3
SNF8-216ENST00000573795 GAR1Q9NY12 217 aaKnown RBP16.91■□□□□ 0.3
SNF8-216ENST00000573795 ABRACLQ9P1F3 81 aa16.91■□□□□ 0.3
SNF8-216ENST00000573795 STEAP1Q9UHE8 339 aa16.91■□□□□ 0.3
SNF8-216ENST00000573795 PSORS1C1Q9UIG5 152 aa16.91■□□□□ 0.3
SNF8-216ENST00000573795 ERGIC3Q9Y282 383 aa16.91■□□□□ 0.3
SNF8-216ENST00000573795 A0A0A6YYD4 124 aa16.9■□□□□ 0.3
SNF8-216ENST00000573795 GNAO1P09471 354 aa16.9■□□□□ 0.3
SNF8-216ENST00000573795 OR8U9P0C7N5 309 aa16.9■□□□□ 0.3
SNF8-216ENST00000573795 MAPK3P27361 379 aaPredicted RBP16.9■□□□□ 0.3
SNF8-216ENST00000573795 QRFPP83859 136 aa16.9■□□□□ 0.3
SNF8-216ENST00000573795 HAPLN4Q86UW8 402 aa16.9■□□□□ 0.3
SNF8-216ENST00000573795 NANOGP1Q8N7R0 232 aa16.9■□□□□ 0.3
SNF8-216ENST00000573795 OR5AN1Q8NGI8 311 aa16.9■□□□□ 0.3
SNF8-216ENST00000573795 THRSPQ92748 146 aa16.9■□□□□ 0.3
SNF8-216ENST00000573795 TMEM59Q9BXS4 323 aa16.9■□□□□ 0.3
SNF8-216ENST00000573795 MYL12BO14950 172 aa16.89■□□□□ 0.29
SNF8-216ENST00000573795 PROP1O75360 226 aa16.89■□□□□ 0.29
SNF8-216ENST00000573795 PLECQ15149 4684 aaKnown RBP16.89■□□□□ 0.29
SNF8-216ENST00000573795 AHSA2Q719I0 299 aa16.89■□□□□ 0.29
SNF8-216ENST00000573795 PPP1R27Q86WC6 154 aa16.89■□□□□ 0.29
SNF8-216ENST00000573795 DHRSXQ8N5I4 330 aa16.89■□□□□ 0.29
SNF8-216ENST00000573795 FBLIM1Q8WUP2 373 aa16.89■□□□□ 0.29
SNF8-216ENST00000573795 RHOVQ96L33 236 aa16.89■□□□□ 0.29
SNF8-216ENST00000573795 WASHC3Q9Y3C0 194 aa16.89■□□□□ 0.29
SNF8-216ENST00000573795 TMEM14DPA8MWL7 114 aa16.88■□□□□ 0.29
SNF8-216ENST00000573795 ITGB1BP1O14713 200 aa16.88■□□□□ 0.29
SNF8-216ENST00000573795 HSPB1P04792 205 aaKnown RBP16.88■□□□□ 0.29
SNF8-216ENST00000573795 PLGLAQ15195 96 aa16.88■□□□□ 0.29
SNF8-216ENST00000573795 ACSM3Q53FZ2 586 aa16.88■□□□□ 0.29
SNF8-216ENST00000573795 AKIRIN2Q53H80 203 aa16.88■□□□□ 0.29
SNF8-216ENST00000573795 ACTBL2Q562R1 376 aa16.88■□□□□ 0.29
SNF8-216ENST00000573795 PYHIN1Q6K0P9 492 aa16.88■□□□□ 0.29
SNF8-216ENST00000573795 UNQ5815/PRO19632Q6UWF5 114 aa16.88■□□□□ 0.29
SNF8-216ENST00000573795 Q8N1Y9 231 aa16.88■□□□□ 0.29
SNF8-216ENST00000573795 LFNGQ8NES3 379 aa16.88■□□□□ 0.29
SNF8-216ENST00000573795 ABHD5Q8WTS1 349 aa16.88■□□□□ 0.29
SNF8-216ENST00000573795 MS4A10Q96PG2 267 aa16.88■□□□□ 0.29
SNF8-216ENST00000573795 CLCC1Q96S66 551 aa16.88■□□□□ 0.29
SNF8-216ENST00000573795 TM2D3Q9BRN9 247 aa16.88■□□□□ 0.29
SNF8-216ENST00000573795 HDHD3Q9BSH5 251 aaPredicted RBP16.88■□□□□ 0.29
SNF8-216ENST00000573795 GHITMQ9H3K2 345 aa16.88■□□□□ 0.29
SNF8-216ENST00000573795 PLCXD1Q9NUJ7 323 aa16.88■□□□□ 0.29
SNF8-216ENST00000573795 FKBP14Q9NWM8 211 aa16.88■□□□□ 0.29
SNF8-216ENST00000573795 OR1A1Q9P1Q5 309 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms