RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 PPT1P50897 306 aa13.61□□□□□ -0.23
POLR2A-201ENST00000572844 HBG1P69891 147 aa13.61□□□□□ -0.23
POLR2A-201ENST00000572844 HBG2P69892 147 aa13.61□□□□□ -0.23
POLR2A-201ENST00000572844 SPSB3Q6PJ21 355 aa13.61□□□□□ -0.23
POLR2A-201ENST00000572844 LRP11Q86VZ4 500 aa13.61□□□□□ -0.23
POLR2A-201ENST00000572844 RPRMLQ8N4K4 120 aa13.61□□□□□ -0.23
POLR2A-201ENST00000572844 MEGF10Q96KG7 1140 aa13.61□□□□□ -0.23
POLR2A-201ENST00000572844 HSD17B10Q99714 261 aaKnown RBP13.61□□□□□ -0.23
POLR2A-201ENST00000572844 EIF5A2Q9GZV4 153 aaKnown RBP13.61□□□□□ -0.23
POLR2A-201ENST00000572844 DUSP13Q9UII6 198 aa13.61□□□□□ -0.23
POLR2A-201ENST00000572844 RNF150Q9ULK6 438 aa13.61□□□□□ -0.23
POLR2A-201ENST00000572844 SVILO95425 2214 aa13.61□□□□□ -0.23
POLR2A-201ENST00000572844 IGKV1D-17A0A075B6S4 117 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 K7EM74 188 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 LHBP01229 141 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 PPP1CCP36873 323 aaKnown RBP13.6□□□□□ -0.23
POLR2A-201ENST00000572844 GATA4P43694 442 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 RPL30P62888 115 aaKnown RBP13.6□□□□□ -0.23
POLR2A-201ENST00000572844 HOXA4Q00056 320 aaPredicted RBP13.6□□□□□ -0.23
POLR2A-201ENST00000572844 SMUG1Q53HV7 270 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 AKR1C8PQ5T2L2 129 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 TMEM88Q6PEY1 159 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 FAM180AQ6UWF9 173 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 GCSAMQ8N6F7 178 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 KIAA1456Q9P272 454 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 HSPB7Q9UBY9 170 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 GVINP1Q7Z2Y8 2422 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 MKRN2OSH3BPM6 223 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 SSTR5P35346 364 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 HFEQ30201 348 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 CBLN2Q8IUK8 224 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 EDARADDQ8WWZ3 215 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 PSMG3Q9BT73 122 aaPredicted RBP13.6□□□□□ -0.23
POLR2A-201ENST00000572844 SLC35B3Q9H1N7 401 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 SSUH2Q9Y2M2 353 aa13.6□□□□□ -0.23
POLR2A-201ENST00000572844 TRAV1-1A0A0B4J248 108 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 A8MXE2 369 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 RAB29O14966 203 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 PPIHO43447 177 aaKnown RBP13.59□□□□□ -0.23
POLR2A-201ENST00000572844 CLDN14O95500 239 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 HBE1P02100 147 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 TFF1P04155 84 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 PAX6P26367 422 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 UBE2KP61086 200 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 TLE4Q04727 773 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 TMEM267Q0VDI3 215 aaPredicted RBP13.59□□□□□ -0.23
POLR2A-201ENST00000572844 ZNF525Q8N782 197 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 OR2V2Q96R30 315 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 KCNJ16Q9NPI9 418 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 JPT1Q9UK76 154 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 RFNGQ9Y644 331 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 CACNA1DQ01668 2161 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 ODAMA1E959 279 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 H3BP45 60 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 RAMP3O60896 148 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 CLDN1O95832 211 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 IAPPP10997 89 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 BRWD1-AS2P59051 145 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 FLI1Q01543 452 aaPredicted RBP13.59□□□□□ -0.23
POLR2A-201ENST00000572844 TNFRSF9Q07011 255 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 TMEM14EPQ6UXP3 125 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 SCGB1C1Q8TD33 95 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 CD300LFQ8TDQ1 290 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 TCTEX1D2Q8WW35 142 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 AGMATQ9BSE5 352 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 ABHD14AQ9BUJ0 271 aa13.59□□□□□ -0.23
POLR2A-201ENST00000572844 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.59□□□□□ -0.23
POLR2A-201ENST00000572844 PTPRZ1P23471 2315 aaPredicted RBP13.58□□□□□ -0.24
POLR2A-201ENST00000572844 USF3Q68DE3 2245 aa13.58□□□□□ -0.24
POLR2A-201ENST00000572844 LRRC30A6NM36 301 aa13.58□□□□□ -0.24
POLR2A-201ENST00000572844 H7C2Y5 167 aa13.58□□□□□ -0.24
POLR2A-201ENST00000572844 RAB2AP61019 212 aa13.58□□□□□ -0.24
POLR2A-201ENST00000572844 RUNX1Q01196 453 aa13.58□□□□□ -0.24
POLR2A-201ENST00000572844 ZNF808Q8N4W9 903 aaPredicted RBP13.58□□□□□ -0.24
POLR2A-201ENST00000572844 FAM222BQ8WU58 562 aa13.58□□□□□ -0.24
POLR2A-201ENST00000572844 RBMXL1Q96E39 390 aaKnown RBP13.58□□□□□ -0.24
POLR2A-201ENST00000572844 SMCO4Q9NRQ5 59 aa13.58□□□□□ -0.24
POLR2A-201ENST00000572844 CEP250Q9BV73 2442 aa13.58□□□□□ -0.24
POLR2A-201ENST00000572844 C17orf98A8MV24 154 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 F2RL2O00254 374 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 YPEL1O60688 119 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 CTRB1P17538 263 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 SELENOVP59797 346 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 LRRC75BQ2VPJ9 315 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 CTRB2Q6GPI1 263 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 FAM53AQ6NSI3 398 aaPredicted RBP13.57□□□□□ -0.24
POLR2A-201ENST00000572844 HAPLN4Q86UW8 402 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 TPRX1Q8N7U7 411 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 YPEL2Q96QA6 119 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 RBKSQ9H477 322 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 RBFOX3A6NFN3 312 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 ITGB1BP1O14713 200 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 S1PR2O95136 353 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 METTL15P1P0C7V9 234 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 NFYBP25208 207 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 SERF2P84101 59 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 ARL16Q0P5N6 197 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 SLC25A24Q6NUK1 477 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 MRGPRGQ86SM5 289 aa13.57□□□□□ -0.24
POLR2A-201ENST00000572844 MOGAT3Q86VF5 341 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms